Extended phylogeny and a revised generic classification of the Pannariaceae (Peltigerales, Ascomycota)

Notes on Some Pannariaceous Lichens from New Caledonia

(2013) Per M. Jørgensen et al.   CRYPTOGAMIE MYCOLOGIE

Expanded taxon sampling disentangles evolutionary relationships and reveals a new family in Peltigerales (Lecanoromycetidae, Ascomycota)

(2012) Toby Spribille et al.   FUNGAL DIVERSITY

Does the Reproductive Strategy Affect the Transmission and Genetic Diversity of Bionts in Cyanolichens? A Case Study Using Two Closely Related Species

(2012) Mónica A. G. Otálora et al.   MICROBIAL ECOLOGY

PartitionFinder: Combined Selection of Partitioning Schemes and Substitution Models for Phylogenetic Analyses

(2012) R. Lanfear et al.   MOLECULAR BIOLOGY AND EVOLUTION

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

(2012) Fredrik Ronquist et al.   SYSTEMATIC BIOLOGY

Convergent evolution of a symbiotic duet: The case of the lichen genus Polychidium (Peltigerales, Ascomycota)

(2011) Lucia Muggia et al.   AMERICAN JOURNAL OF BOTANY

Vahliellaceae, a new family of cyanobacterial lichens ( Peltigerales, Ascomycetes)

(2011) Mats WEDIN et al.   LICHENOLOGIST

The Devil in the Details: Interactions between the Branch-Length Prior and Likelihood Model Affect Node Support and Branch Lengths in the Phylogeny of the Psoraceae

(2011) Stefan Ekman et al.   SYSTEMATIC BIOLOGY

Lichens and lichenicolous fungi of the Klondike Gold Rush National Historic Park, Alaska, in a global biodiversity context

(2010) Toby Spribille et al.   BRYOLOGIST

Psorophorus and Xanthopsoroma, two new genera for yellow-green, corticolous and squamulose lichen species, previously in Psoroma

(2010) Arve ELVEBAKK et al.   LICHENOLOGIST

Disentangling the Collema-Leptogium complex through a molecular phylogenetic study of the Collemataceae (Peltigerales, lichen-forming Ascomycota)

(2010) Mónica A.G. Otálora et al.   MYCOLOGIA

Additions to the lichen family Pannariaceae in Ecuador

(2010) Per M. Jørgensen et al.   NORDIC JOURNAL OF BOTANY

New discoveries in the lichen genus Staurolemma Körber

(2010) Per M. Jørgensen   NOVA HEDWIGIA

New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0

(2010) Stéphane Guindon et al.   SYSTEMATIC BIOLOGY

CentroidAlign: fast and accurate aligner for structured RNAs by maximizing expected sum-of-pairs score

(2009) M. Hamada et al.   BIOINFORMATICS

PhyloBayes 3: a Bayesian software package for phylogenetic reconstruction and molecular dating

(2009) Nicolas Lartillot et al.   BIOINFORMATICS

Slippery when wet: Phylogeny and character evolution in the gelatinous cyanobacterial lichens (Peltigerales, Ascomycetes)

(2009) Mats Wedin et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Phylogenies reveal new interpretation of speciation and the Red Queen

(2009) Chris Venditti et al.   NATURE

A Monte Carlo Approach Successfully Identifies Randomness in Multiple Sequence Alignments : A More Objective Means of Data Exclusion

(2009) Bernhard Misof et al.   SYSTEMATIC BIOLOGY

The Ascomycota Tree of Life: A Phylum-wide Phylogeny Clarifies the Origin and Evolution of Fundamental Reproductive and Ecological Traits

(2009) Conrad L. Schoch et al.   SYSTEMATIC BIOLOGY

Phyutility: a phyloinformatics tool for trees, alignments and molecular data

(2008) S. A. Smith et al.   BIOINFORMATICS

Improved accuracy of multiple ncRNA alignment by incorporating structural information into a MAFFT-based framework

(2008) Kazutaka Katoh et al.   BMC BIOINFORMATICS

Rfam: updates to the RNA families database

(2008) P. P. Gardner et al.   NUCLEIC ACIDS RESEARCH

The Limitations of Ancestral State Reconstruction and the Evolution of the Ascus in the Lecanorales (Lichenized Ascomycota)

(2008) Stefan Ekman et al.   SYSTEMATIC BIOLOGY

Joergensenia, a new genus to accommodate Psoroma cephalodinum (lichenized Ascomycota)

(2008) Alfredo Passo et al.