Actinomycetes biosynthetic potential: how to bridge in silico and in vivo?
Published 2013 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Actinomycetes biosynthetic potential: how to bridge in silico and in vivo?
Authors
Keywords
Actinomycetes, Cryptic gene clusters, Synthetic promoters, Heterologous expression, Genome mining
Journal
JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY
Volume 41, Issue 2, Pages 387-402
Publisher
Springer Nature
Online
2013-10-14
DOI
10.1007/s10295-013-1352-9
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- An Engineered Strong Promoter for Streptomycetes
- (2013) W. Wang et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Improvement of gougerotin and nikkomycin production by engineering their biosynthetic gene clusters
- (2013) Deyao Du et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- Novel Tryptophan Metabolism by a Potential Gene Cluster That Is Widely Distributed among Actinomycetes
- (2013) Taro Ozaki et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Activating the expression of bacterial cryptic genes by rpoB mutations in RNA polymerase or by rare earth elements
- (2013) Kozo Ochi et al. JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY
- Heterologous expression of natural product biosynthetic gene clusters in Streptomyces coelicolor: from genome mining to manipulation of biosynthetic pathways
- (2013) Juan Pablo Gomez-Escribano et al. JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY
- Synthetic riboswitches for the conditional control of gene expression in Streptomyces coelicolor
- (2013) M. M. Rudolph et al. MICROBIOLOGY-SGM
- antiSMASH 2.0—a versatile platform for genome mining of secondary metabolite producers
- (2013) Kai Blin et al. NUCLEIC ACIDS RESEARCH
- Transcriptomic Analysis of Streptomyces coelicolor Differentiation in Solid Sporulating Cultures: First Compartmentalized and Second Multinucleated Mycelia Have Different and Distinctive Transcriptomes
- (2013) Paula Yagüe et al. PLoS One
- Synthetic RNA Silencing of Actinorhodin Biosynthesis in Streptomyces coelicolor A3(2)
- (2013) Gabriel C. Uguru et al. PLoS One
- Alternative Sigma Factor Over-Expression Enables Heterologous Expression of a Type II Polyketide Biosynthetic Pathway in Escherichia coli
- (2013) David Cole Stevens et al. PLoS One
- Engineered Streptomyces avermitilis Host for Heterologous Expression of Biosynthetic Gene Cluster for Secondary Metabolites
- (2013) Mamoru Komatsu et al. ACS Synthetic Biology
- Site-Specific Recombination Strategies for Engineering Actinomycete Genomes
- (2012) Simone Herrmann et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Genome-based cryptic gene discovery and functional identification of NRPS siderophore peptide in Streptomyces peucetius
- (2012) Hae-Min Park et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- Genome-based bioprospecting of microbes for new therapeutics
- (2012) Sergey B Zotchev et al. CURRENT OPINION IN BIOTECHNOLOGY
- Sequential deletion of all the polyketide synthase and nonribosomal peptide synthetase biosynthetic gene clusters and a 900-kb subtelomeric sequence of the linear chromosome of Streptomyces coelicolor
- (2012) Min Zhou et al. FEMS MICROBIOLOGY LETTERS
- Improvement of A21978C production in Streptomyces roseosporus by reporter-guided rpsL mutation selection
- (2012) L. Wang et al. JOURNAL OF APPLIED MICROBIOLOGY
- RNA-Seq and RNA Immunoprecipitation Analyses of the Transcriptome of Streptomyces coelicolor Identify Substrates for RNase III
- (2012) M. L. Gatewood et al. JOURNAL OF BACTERIOLOGY
- Artificial Chromosomes to Explore and to Exploit Biosynthetic Capabilities of Actinomycetes
- (2012) Rosa Alduina et al. JOURNAL OF BIOMEDICINE AND BIOTECHNOLOGY
- Predictive design of mRNA translation initiation region to control prokaryotic translation efficiency
- (2012) Sang Woo Seo et al. METABOLIC ENGINEERING
- A highly specialized flavin mononucleotide riboswitch responds differently to similar ligands and confers roseoflavin resistance to Streptomyces davawensis
- (2012) Danielle Biscaro Pedrolli et al. NUCLEIC ACIDS RESEARCH
- Structure and biosynthesis of the unusual polyketide alkaloid coelimycin P1, a metabolic product of the cpk gene cluster of Streptomyces coelicolor M145
- (2012) Juan Pablo Gomez-Escribano et al. Chemical Science
- Activation of a silent phenazine biosynthetic gene cluster reveals a novel natural product and a new resistance mechanism against phenazines
- (2012) Orwah Saleh et al. MedChemComm
- β-Glucuronidase as a Sensitive and Versatile Reporter in Actinomycetes
- (2011) Maksym Myronovskyi et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- The construction of a library of synthetic promoters revealed some specific features of strong Streptomyces promoters
- (2011) Nicolas Seghezzi et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- Development of a gene cloning system in a fast-growing and moderately thermophilic Streptomyces species and heterologous expression of Streptomyces antibiotic biosynthetic gene clusters
- (2011) Weihua Chen et al. BMC MICROBIOLOGY
- Imaging Mass Spectrometry and Genome Mining via Short Sequence Tagging Identified the Anti-Infective Agent Arylomycin inStreptomyces roseosporus
- (2011) Wei-Ting Liu et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- Rapid characterization and engineering of natural product biosynthetic pathways via DNA assembler
- (2011) Zengyi Shao et al. Molecular BioSystems
- Determinants of translation efficiency and accuracy
- (2011) H. Gingold et al. Molecular Systems Biology
- A mass spectrometry–guided genome mining approach for natural product peptidogenomics
- (2011) Roland D Kersten et al. Nature Chemical Biology
- Termination and antitermination: RNA polymerase runs a stop sign
- (2011) Thomas J. Santangelo et al. NATURE REVIEWS MICROBIOLOGY
- Identification of a bioactive 51-membered macrolide complex by activation of a silent polyketide synthase in Streptomyces ambofaciens
- (2011) L. Laureti et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- ARNold: A web tool for the prediction of Rho-independent transcription terminators
- (2011) Magali Naville et al. RNA Biology
- Deep sequencing-based identification of small non-coding RNAs inStreptomyces coelicolor
- (2011) Michael-Paul Vockenhuber et al. RNA Biology
- Use of an inducible promoter for antibiotic production in a heterologous host
- (2010) Volker Dangel et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- RBSDesigner: software for designing synthetic ribosome binding sites that yields a desired level of protein expression
- (2010) D. Na et al. BIOINFORMATICS
- Rare earth elements activate the secondary metabolite–biosynthetic gene clusters in Streptomyces coelicolor A3(2)
- (2010) Yukinori Tanaka et al. JOURNAL OF ANTIBIOTICS
- “Pseudo” γ-Butyrolactone Receptors Respond to Antibiotic Signals to Coordinate Antibiotic Biosynthesis
- (2010) Gangming Xu et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Streptomyces and Saccharopolyspora hosts for heterologous expression of secondary metabolite gene clusters
- (2010) Richard H. Baltz JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY
- Robust reporter system based on chalcone synthase rppA gene from Saccharopolyspora erythraea
- (2010) V. Magdevska et al. JOURNAL OF MICROBIOLOGICAL METHODS
- Streptomyces coelicolor A3(2) Produces a New Yellow Pigment Associated with the Polyketide Synthase Cpk
- (2010) Krzysztof Pawlik et al. JOURNAL OF MOLECULAR MICROBIOLOGY AND BIOTECHNOLOGY
- Deletion of a regulatory gene within the cpk gene cluster reveals novel antibacterial activity in Streptomyces coelicolor A3(2)
- (2010) M. Gottelt et al. MICROBIOLOGY-SGM
- WebGeSTer DB—a transcription terminator database
- (2010) Anirban Mitra et al. NUCLEIC ACIDS RESEARCH
- Genome-minimized Streptomyces host for the heterologous expression of secondary metabolism
- (2010) M. Komatsu et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Properties of lanK-based regulatory circuit involved in landomycin biosynthesis in Streptomyces cyanogenus S136
- (2010) B. Ostash et al. RUSSIAN JOURNAL OF GENETICS
- Riboswitches and the RNA World
- (2010) R. R. Breaker Cold Spring Harbor Perspectives in Biology
- Engineering Streptomyces coelicolor for heterologous expression of secondary metabolite gene clusters
- (2010) Juan Pablo Gomez-Escribano et al. Microbial Biotechnology
- Adaptation of the Highly Productive T7 Expression System to Streptomyces lividans
- (2009) F.-X. Lussier et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- An overview of RNAs with regulatory functions in gram-positive bacteria
- (2009) Pascale Romby et al. CELLULAR AND MOLECULAR LIFE SCIENCES
- Transcriptomics analyses reveal global roles of the regulator AveI inStreptomyces avermitilis
- (2009) Lei Chen et al. FEMS MICROBIOLOGY LETTERS
- Imaging of Streptomyces coelicolor A3(2) with Reduced Autofluorescence Reveals a Novel Stage of FtsZ Localization
- (2009) Joost Willemse et al. PLoS One
- Towards Prediction of Metabolic Products of Polyketide Synthases: An In Silico Analysis
- (2009) Gitanjali Yadav et al. PLoS Computational Biology
- Functional expression of the Cre recombinase in actinomycetes
- (2008) Marta Fedoryshyn et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- The use of the rare UUA codon to define “Expression Space” for genes involved in secondary metabolism, development and environmental adaptation in Streptomyces
- (2008) Keith F. Chater et al. JOURNAL OF MICROBIOLOGY
- Uncovering Genes with Divergent mRNA-Protein Dynamics in Streptomyces coelicolor
- (2008) Karthik P. Jayapal et al. PLoS One
- pTONA5: A hyperexpression vector in streptomycetes
- (2008) Tadashi Hatanaka et al. PROTEIN EXPRESSION AND PURIFICATION
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreFind the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
Search