The Molecular Evolution of the Qo Motif

The Futalosine Pathway Played an Important Role in Menaquinone Biosynthesis during Early Prokaryote Evolution

(2014) Xiao-Yang Zhi et al.   Genome Biology and Evolution

Key role of water in proton transfer at the Qo-site of the cytochrome bc1 complex predicted by atomistic molecular dynamics simulations

(2013) Pekka A. Postila et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Evolution of cytochrome bc complexes: From membrane-anchored dehydrogenases of ancient bacteria to triggers of apoptosis in vertebrates

(2013) Daria V. Dibrova et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Multiple Rieske/cytb complexes in a single organism

(2013) F. ten Brink et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

The mechanism of ubihydroquinone oxidation at the Qo-site of the cytochrome bc1 complex

(2013) Antony R. Crofts et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Small-molecule ligand docking into comparative models with Rosetta

(2013) Steven A Combs et al.   Nature Protocols

OXPHOS mutations and neurodegeneration

(2012) Werner J H Koopman et al.   EMBO JOURNAL

Characterization ofMelioribacter roseusgen. nov., sp. nov., a novel facultatively anaerobic thermophilic cellulolytic bacterium from the classIgnavibacteria, and a proposal of a novel bacterial phylumIgnavibacteriae

(2012) Olga A. Podosokorskaya et al.   ENVIRONMENTAL MICROBIOLOGY

Phylogeny of Rieske/cytb Complexes with a Special Focus on the Haloarchaeal Enzymes

(2012) Frauke Baymann et al.   Genome Biology and Evolution

Biochemistry and Evolution of Anaerobic Energy Metabolism in Eukaryotes

(2012) M. Muller et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Mitochondrial disorders as windows into an ancient organelle

(2012) Scott B. Vafai et al.   NATURE

Acquisition of 1,000 eubacterial genes physiologically transformed a methanogen at the origin of Haloarchaea

(2012) S. Nelson-Sathi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

(2012) Fredrik Ronquist et al.   SYSTEMATIC BIOLOGY

Evolution of Photosynthesis

(2011) Martin F. Hohmann-Marriott et al.   Annual Review of Plant Biology

X-ray structure of the dimeric cytochrome bc1 complex from the soil bacterium Paracoccus denitrificans at 2.7-Å resolution

(2011) Thomas Kleinschroth et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Mitochondrial fumarate reductase as a target of chemotherapy: From parasites to cancer cells

(2011) Chika Sakai et al.   BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS

Identification of a New Gene Required for the Biosynthesis of Rhodoquinone in Rhodospirillum rubrum

(2011) Z. T. Lonjers et al.   JOURNAL OF BACTERIOLOGY

Extreme mitochondrial evolution in the ctenophoreMnemiopsis leidyi: Insight from mtDNA and the nuclear genome

(2011) Walker Pett et al.   Mitochondrial DNA

Rapid evolution of the compact and unusual mitochondrial genome in the ctenophore, Pleurobrachia bachei

(2011) Andrea B. Kohn et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega

(2011) F. Sievers et al.   Molecular Systems Biology

Complete genome sequence of Thermaerobacter marianensis type strain (7p75aT)

(2011) Cliff Han et al.   Standards in Genomic Sciences

Accelerated Profile HMM Searches

(2011) Sean R. Eddy   PLoS Computational Biology

Occurrence, biosynthesis and function of isoprenoid quinones

(2010) Beatrycze Nowicka et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Desulfosporosinus acidiphilus sp. nov.: a moderately acidophilic sulfate-reducing bacterium isolated from acid mining drainage sediments

(2010) Didier Alazard et al.   EXTREMOPHILES

Aquifex aeolicus membrane hydrogenase for hydrogen biooxidation: Role of lipids and physiological partners in enzyme stability and activity

(2010) Pascale Infossi et al.   INTERNATIONAL JOURNAL OF HYDROGEN ENERGY

Nitrite-driven anaerobic methane oxidation by oxygenic bacteria

(2010) Katharina F. Ettwig et al.   NATURE

Heliobacterial Rieske/cytb complex

(2010) F. Baymann et al.   PHOTOSYNTHESIS RESEARCH

The “green” phylogenetic clade of Rieske/cytb complexes

(2010) W. Nitschke et al.   PHOTOSYNTHESIS RESEARCH

Structural Basis of Biological N2O Generation by Bacterial Nitric Oxide Reductase

(2010) T. Hino et al.   SCIENCE

Complete genome sequence of Conexibacter woesei type strain (ID131577T)

(2010) Rüdiger Pukall et al.   Standards in Genomic Sciences

Jalview Version 2--a multiple sequence alignment editor and analysis workbench

(2009) A. M. Waterhouse et al.   BIOINFORMATICS

The ArcBA Two-Component System of Escherichia coli Is Regulated by the Redox State of both the Ubiquinone and the Menaquinone Pool

(2009) M. Bekker et al.   JOURNAL OF BACTERIOLOGY

PROSITE, a protein domain database for functional characterization and annotation

(2009) Christian J. A. Sigrist et al.   NUCLEIC ACIDS RESEARCH

Menaquinone as pool quinone in a purple bacterium

(2009) B. Schoepp-Cothenet et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Systems Analysis of Bioenergetics and Growth of the Extreme Halophile Halobacterium salinarum

(2009) Orland Gonzalez et al.   PLoS Computational Biology

Is CytochromebGlutamic Acid 272 a Quinol Binding Residue in thebc1Complex ofSaccharomyces cerevisiae?

(2008) Nadir Seddiki et al.   BIOCHEMISTRY

The Rieske/cytochrome b complex of Heliobacteria

(2008) A.L. Ducluzeau et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Purification and Characterization of Active-Site Components of the Putative p-Cresol Methylhydroxylase Membrane Complex from Geobacter metallireducens

(2008) J. Johannes et al.   JOURNAL OF BACTERIOLOGY

A korarchaeal genome reveals insights into the evolution of the Archaea

(2008) J. G. Elkins et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The All-Species Living Tree project: A 16S rRNA-based phylogenetic tree of all sequenced type strains

(2008) Pablo Yarza et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Was nitric oxide the first deep electron sink?

(2008) Anne-Lise Ducluzeau et al.   TRENDS IN BIOCHEMICAL SCIENCES