Mitochondrial Genome Rearrangements in the Scleractinia/Corallimorpharia Complex: Implications for Coral Phylogeny

The “Naked Coral” Hypothesis Revisited – Evidence for and Against Scleractinian Monophyly

(2014) Marcelo V. Kitahara et al.   PLoS One

Cnidarian phylogenetic relationships as revealed by mitogenomics

(2013) Ehsan Kayal et al.   BMC EVOLUTIONARY BIOLOGY

SINA: Accurate high-throughput multiple sequence alignment of ribosomal RNA genes

(2012) Elmar Pruesse et al.   BIOINFORMATICS

The Mitochondrial Genome of Paraminabea aldersladei (Cnidaria: Anthozoa: Octocorallia) Supports Intramolecular Recombination as the Primary Mechanism of Gene Rearrangement in Octocoral Mitochondrial Genomes

(2012) Stephanie A. Brockman et al.   Genome Biology and Evolution

The first modern solitary Agariciidae (Anthozoa, Scleractinia) revealed by molecular and microstructural analysis

(2012) Marcelo V. Kitahara et al.   INVERTEBRATE SYSTEMATICS

Novel organization of the mitochondrial genome in the deep-sea coral, Madrepora oculata (Hexacorallia, Scleractinia, Oculinidae) and its taxonomic implications

(2012) Mei-Fang Lin et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Multiple rearrangements in mitochondrial genomes of Isopoda and phylogenetic implications

(2012) Fabian Kilpert et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Deltocyathiidae, an early-diverging family of Robust corals (Anthozoa, Scleractinia)

(2012) Marcelo V. Kitahara et al.   ZOOLOGICA SCRIPTA

The ancient evolutionary origins of Scleractinia revealed by azooxanthellate corals

(2011) Jarosław Stolarski et al.   BMC EVOLUTIONARY BIOLOGY

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Mitogenome rearrangement in the cold-water scleractinian coral Lophelia pertusa (Cnidaria, Anthozoa) involves a long-term evolving group I intron

(2011) Åse Emblem et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Monophyletic origin ofCaryophyllia(Scleractinia, Caryophylliidae), with descriptions of six new species

(2011) Marcelo V. Kitahara et al.   SYSTEMATICS AND BIODIVERSITY

Using jackknife to assess the quality of gene order phylogenies

(2010) Jian Shi et al.   BMC BIOINFORMATICS

A Comprehensive Phylogenetic Analysis of the Scleractinia (Cnidaria, Anthozoa) Based on Mitochondrial CO1 Sequence Data

(2010) Marcelo V. Kitahara et al.   PLoS One

Repeated loss of coloniality and symbiosis in scleractinian corals

(2010) M. S. Barbeitos et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Group I introns: Moving in new directions

(2010) Henrik Nielsen et al.   RNA Biology

The complete mitochondrial genome of Symphylella sp. (Myriapoda: Symphyla): Extensive gene order rearrangement and evidence in favor of Progoneata

(2008) Yonghua Gai et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Mitochondrial and Nuclear Genes Suggest that Stony Corals Are Monophyletic but Most Families of Stony Corals Are Not (Order Scleractinia, Class Anthozoa, Phylum Cnidaria)

(2008) Hironobu Fukami et al.   PLoS One