The “Naked Coral” Hypothesis Revisited – Evidence for and Against Scleractinian Monophyly

Fast-Evolving Mitochondrial DNA in Ceriantharia: A Reflection of Hexacorallia Paraphyly?

(2014) Sérgio N. Stampar et al.   PLoS One

Cnidarian phylogenetic relationships as revealed by mitogenomics

(2013) Ehsan Kayal et al.   BMC EVOLUTIONARY BIOLOGY

CodonPhyML: Fast Maximum Likelihood Phylogeny Estimation under Codon Substitution Models

(2013) Manuel Gil et al.   MOLECULAR BIOLOGY AND EVOLUTION

Atmospheric dimethysulphide production from corals in the Great Barrier Reef and links to solar radiation, climate and coral bleaching

(2012) Esther Fischer et al.   BIOGEOCHEMISTRY

Evolutionary insights into scleractinian corals using comparative genomic hybridizations

(2012) Manuel Aranda et al.   BMC GENOMICS

The first modern solitary Agariciidae (Anthozoa, Scleractinia) revealed by molecular and microstructural analysis

(2012) Marcelo V. Kitahara et al.   INVERTEBRATE SYSTEMATICS

Novel organization of the mitochondrial genome in the deep-sea coral, Madrepora oculata (Hexacorallia, Scleractinia, Oculinidae) and its taxonomic implications

(2012) Mei-Fang Lin et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Threatened Reef Corals of the World

(2012) Danwei Huang   PLoS One

Deltocyathiidae, an early-diverging family of Robust corals (Anthozoa, Scleractinia)

(2012) Marcelo V. Kitahara et al.   ZOOLOGICA SCRIPTA

The ancient evolutionary origins of Scleractinia revealed by azooxanthellate corals

(2011) Jarosław Stolarski et al.   BMC EVOLUTIONARY BIOLOGY

Cleaning up the 'Bigmessidae': Molecular phylogeny of scleractinian corals from Faviidae, Merulinidae, Pectiniidae and Trachyphylliidae

(2011) Danwei Huang et al.   BMC EVOLUTIONARY BIOLOGY

The complete mitochondrial genome of Calicogorgia granulosa (Anthozoa: Octocorallia): Potential gene novelty in unidentified ORFs formed by repeat expansion and segmental duplication

(2011) Eunji Park et al.   GENE

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Mitogenome rearrangement in the cold-water scleractinian coral Lophelia pertusa (Cnidaria, Anthozoa) involves a long-term evolving group I intron

(2011) Åse Emblem et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Estimation of divergence times in cnidarian evolution based on mitochondrial protein-coding genes and the fossil record

(2011) Eunji Park et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Using the Acropora digitifera genome to understand coral responses to environmental change

(2011) Chuya Shinzato et al.   NATURE

Monophyletic origin ofCaryophyllia(Scleractinia, Caryophylliidae), with descriptions of six new species

(2011) Marcelo V. Kitahara et al.   SYSTEMATICS AND BIODIVERSITY

A Comprehensive Phylogenetic Analysis of the Scleractinia (Cnidaria, Anthozoa) Based on Mitochondrial CO1 Sequence Data

(2010) Marcelo V. Kitahara et al.   PLoS One

Repeated loss of coloniality and symbiosis in scleractinian corals

(2010) M. S. Barbeitos et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Do genomic datasets resolve the correct relationship among the placental, marsupial and monotreme lineages?

(2009) Gavin Huttley   AUSTRALIAN JOURNAL OF ZOOLOGY

PhyloBayes 3: a Bayesian software package for phylogenetic reconstruction and molecular dating

(2009) Nicolas Lartillot et al.   BIOINFORMATICS

Estimates of the Effect of Natural Selection on Protein-Coding Content

(2009) V. B. Yap et al.   MOLECULAR BIOLOGY AND EVOLUTION

Tinamous and Moa Flock Together: Mitochondrial Genome Sequence Analysis Reveals Independent Losses of Flight among Ratites

(2009) Matthew J. Phillips et al.   SYSTEMATIC BIOLOGY

Nonstationary Evolution and Compositional Heterogeneity in Beetle Mitochondrial Phylogenomics

(2009) Nathan C. Sheffield et al.   SYSTEMATIC BIOLOGY

Potential role of the ocean thermostat in determining regional differences in coral reef bleaching events

(2008) Joan A. Kleypas et al.   GEOPHYSICAL RESEARCH LETTERS

Slow Mitochondrial COI Sequence Evolution at the Base of the Metazoan Tree and Its Implications for DNA Barcoding

(2008) Danwei Huang et al.   JOURNAL OF MOLECULAR EVOLUTION

Unique Mitogenomic Features in the Scleractinian Family Pocilloporidae (Scleractinia: Astrocoeniina)

(2008) Chienhsun Chen et al.   MARINE BIOTECHNOLOGY

Mitochondrial and Nuclear Genes Suggest that Stony Corals Are Monophyletic but Most Families of Stony Corals Are Not (Order Scleractinia, Class Anthozoa, Phylum Cnidaria)

(2008) Hironobu Fukami et al.   PLoS One

DNA BARCODING: Barcoding corals: limited by interspecific divergence, not intraspecific variation

(2007) T. L. SHEARER et al.   Molecular Ecology Resources

The complete mitochondrial genomes of needle corals, Seriatopora spp. (Scleractinia: Pocilloporidae): An idiosyncratic atp8, duplicated trnW gene, and hypervariable regions used to determine species phylogenies and recently diverged populations

(2007) Chienhsun Chen et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION