The Catabolite Repressor/Activator Cra Is a Bridge Connecting Carbon Metabolism and Host Colonization in the Plant Drought Resistance-Promoting Bacterium Pantoea alhagi LTYR-11Z

Feed Your Friends: Do Plant Exudates Shape the Root Microbiome?

(2018) Joelle Sasse et al.   TRENDS IN PLANT SCIENCE

Coordination of metabolic pathways: Enhanced carbon conservation in 1,3-propanediol production by coupling with optically pure lactate biosynthesis

(2017) Bo Xin et al.   METABOLIC ENGINEERING

Cyclic di-GMP: second messenger extraordinaire

(2017) Urs Jenal et al.   NATURE REVIEWS MICROBIOLOGY

BolA Is Required for the Accurate Regulation of c-di-GMP, a Central Player in Biofilm Formation

(2017) Ricardo N. Moreira et al.   mBio

Pantoea alhagi, a novel endophytic bacterium with ability to improve growth and drought tolerance in wheat

(2017) Chaoqiong Chen et al.   Scientific Reports

SuhB Regulates the Motile-Sessile Switch in Pseudomonas aeruginosa through the Gac/Rsm Pathway and c-di-GMP Signaling

(2017) Kewei Li et al.   Frontiers in Microbiology

Bacillus amyloliquefaciens Confers Tolerance to Various Abiotic Stresses and Modulates Plant Response to Phytohormones through Osmoprotection and Gene Expression Regulation in Rice

(2017) Shalini Tiwari et al.   Frontiers in Plant Science

cAMP receptor protein regulates mouse colonization, motility, fimbria-mediated adhesion, and stress tolerance in uropathogenic Proteus mirabilis

(2017) Yi-Lin Tsai et al.   Scientific Reports

The Plant Microbiota: Systems-Level Insights and Perspectives

(2016) Daniel B. Müller et al.   Annual Review of Genetics

Bacterial Stress Responses during Host Infection

(2016) Ferric C. Fang et al.   Cell Host & Microbe

Biofilm plasmids with a rhamnose operon are widely distributed determinants of the ‘swim-or-stick’ lifestyle in roseobacters

(2016) Victoria Michael et al.   ISME Journal

The Catabolite Repressor Protein-Cyclic AMP Complex Regulates csgD and Biofilm Formation in Uropathogenic Escherichia coli

(2016) David A. Hufnagel et al.   JOURNAL OF BACTERIOLOGY

Catabolite and Oxygen Regulation of Enterohemorrhagic Escherichia coli Virulence

(2016) Kimberly M. Carlson-Banning et al.   mBio

CRP Is an Activator of Yersinia pestis Biofilm Formation that Operates via a Mechanism Involving gmhA and waaAE-coaD

(2016) Lei Liu et al.   Frontiers in Microbiology

Alleviation of Drought Stress and Metabolic Changes in Timothy (Phleum pratense L.) Colonized with Bacillus subtilis B26

(2016) François Gagné-Bourque et al.   Frontiers in Plant Science

A Metabolic Widget Adjusts the Phosphoenolpyruvate-Dependent Fructose Influx in Pseudomonas putida

(2016) Max Chavarría et al.   mSystems

Campylobacter jejuni CsrA Regulates Metabolic and Virulence Associated Proteins and Is Necessary for Mouse Colonization

(2016) Joshua A. Fields et al.   PLoS One

Identification of a small molecule that simultaneously suppresses virulence and antibiotic resistance of Pseudomonas aeruginosa

(2016) Qiaoyun Guo et al.   Scientific Reports

Roots Shaping Their Microbiome: Global Hotspots for Microbial Activity

(2015) Barbara Reinhold-Hurek et al.   Annual Review of Phytopathology

Multigene Editing in the Escherichia coli Genome via the CRISPR-Cas9 System

(2015) Yu Jiang et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Whole transcriptomic analysis of the plant-beneficial rhizobacterium Bacillus amyloliquefaciens SQR9 during enhanced biofilm formation regulated by maize root exudates

(2015) Nan Zhang et al.   BMC GENOMICS

Biofilm formation assessment in Sinorhizobium meliloti reveals interlinked control with surface motility

(2015) Carol V Amaya-Gómez et al.   BMC MICROBIOLOGY

The dual transcriptional regulator RovM regulates the expression of AR3- and T6SS4-dependent acid survival systems in response to nutritional status inYersinia pseudotuberculosis

(2015) Yunhong Song et al.   ENVIRONMENTAL MICROBIOLOGY

Endophytic colonization and biocontrol performance ofPseudomonas fluorescens PICF7 in olive (Olea europaeaL.) are determined neither by pyoverdine production nor swimming motility

(2015) M. Mercedes Maldonado-González et al.   ENVIRONMENTAL MICROBIOLOGY

Effect of combined microbes on plant tolerance to Zn–Pb contaminations

(2015) Anna Ogar et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Escherichia coli EDL933 Requires Gluconeogenic Nutrients To Successfully Colonize the Intestines of Streptomycin-Treated Mice Precolonized with E. coli Nissle 1917

(2015) Silvia A. C. Schinner et al.   INFECTION AND IMMUNITY

New insights on molecular regulation of biofilm formation in plant-associated bacteria

(2015) Luisa F. Castiblanco et al.   Journal of Integrative Plant Biology

HISAT: a fast spliced aligner with low memory requirements

(2015) Daehwan Kim et al.   NATURE METHODS

Reduced dependence of rhizosphere microbiome on plant-derived carbon in 32-year long-term inorganic and organic fertilized soils

(2015) Chao Ai et al.   SOIL BIOLOGY & BIOCHEMISTRY

BolA Is a Transcriptional Switch That Turns Off Motility and Turns On Biofilm Development

(2015) Clémentine Dressaire et al.   mBio

Identification of iron and heme utilization genes in Aeromonas and their role in the colonization of the leech digestive tract

(2015) Michele Maltz et al.   Frontiers in Microbiology

Improved plant resistance to drought is promoted by the root-associated microbiome as a water stress-dependent trait

(2014) Eleonora Rolli et al.   ENVIRONMENTAL MICROBIOLOGY

Chp8, a Diguanylate Cyclase from Pseudomonas syringae pv. Tomato DC3000, Suppresses the Pathogen-Associated Molecular Pattern Flagellin, Increases Extracellular Polysaccharides, and Promotes Plant Immune Evasion

(2014) C. Engl et al.   mBio

Building the crops of tomorrow: advantages of symbiont-based approaches to improving abiotic stress tolerance

(2014) Devin Coleman-Derr et al.   Frontiers in Microbiology

Attachment of Agrobacterium to plant surfaces

(2014) Ann G. Matthysse   Frontiers in Plant Science

Genetic Analysis of the Role ofyfiRin the Ability of Escherichia coli CFT073 To Control Cellular Cyclic Dimeric GMP Levels and To Persist in the Urinary Tract

(2013) Erica L. Raterman et al.   INFECTION AND IMMUNITY

Cyclic di-GMP: the First 25 Years of a Universal Bacterial Second Messenger

(2013) U. Romling et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

CsrA activatesflhDCexpression by protectingflhDCmRNA from RNase E-mediated cleavage

(2013) Alexander V. Yakhnin et al.   MOLECULAR MICROBIOLOGY

Microbiome: Soil science comes to life

(2013) Roger East   NATURE

Bacillus subtilis biofilm induction by plant polysaccharides

(2013) P. B. Beauregard et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Cyclic diguanosine monophosphate represses bacterial flagella synthesis by interacting with the Walker A motif of the enhancer-binding protein FleQ

(2013) C. Baraquet et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Environmental reservoirs and mechanisms of persistence of Vibrio cholerae

(2013) Carla Lutz et al.   Frontiers in Microbiology

Root-microbe systems: the effect and mode of interaction of Stress Protecting Agent (SPA) Stenotrophomonas rhizophila DSM14405T

(2013) Peyman Alavi et al.   Frontiers in Plant Science

A type VI secretion system regulated by OmpR inYersinia pseudotuberculosisfunctions to maintain intracellular pH homeostasis

(2012) Weipeng Zhang et al.   ENVIRONMENTAL MICROBIOLOGY

Stringent Response Regulation of Biofilm Formation in Vibrio cholerae

(2012) H. He et al.   JOURNAL OF BACTERIOLOGY

YdiV: a dual function protein that targets FlhDC for ClpXP-dependent degradation by promoting release of DNA-bound FlhDC complex

(2012) Akiko Takaya et al.   MOLECULAR MICROBIOLOGY

Virulence Meets Metabolism: Cra and KdpE Gene Regulation in Enterohemorrhagic Escherichia coli

(2012) J. W. Njoroge et al.   mBio

Functional Amyloids Composed of Phenol Soluble Modulins Stabilize Staphylococcus aureus Biofilms

(2012) Kelly Schwartz et al.   PLoS Pathogens

Crp Induces Switching of the CsrB and CsrC RNAs in Yersinia pseudotuberculosis and Links Nutritional Status to Virulence

(2012) Ann Kathrin Heroven et al.   Frontiers in Cellular and Infection Microbiology

Impact of root exudates and plant defense signaling on bacterial communities in the rhizosphere. A review

(2011) Rogier F. Doornbos et al.   Agronomy for Sustainable Development

Biofilm formation in Escherichia coli cra mutants is impaired due to down-regulation of curli biosynthesis

(2011) Shamlan M. S. Reshamwala et al.   ARCHIVES OF MICROBIOLOGY

Biosynthesis of UDP-glucuronic acid and UDP-galacturonic acid in Bacillus cereus subsp. cytotoxis NVH 391-98

(2011) Bryan Broach et al.   FEBS Journal

Cra negatively regulates acid survival in Yersinia pseudotuberculosis

(2011) Yangbo Hu et al.   FEMS MICROBIOLOGY LETTERS

EAL Domain Protein YdiV Acts as an Anti-FlhD4C2 Factor Responsible for Nutritional Control of the Flagellar Regulon in Salmonella enterica Serovar Typhimurium

(2011) T. Wada et al.   JOURNAL OF BACTERIOLOGY

Role of the Biofilm Master Regulator CsgD in Cross-Regulation between Biofilm Formation and Flagellar Synthesis

(2011) H. Ogasawara et al.   JOURNAL OF BACTERIOLOGY

Exopolysaccharide Production Is Required for Biofilm Formation and Plant Colonization by the Nitrogen-Fixing EndophyteGluconacetobacter diazotrophicus

(2011) Carlos H. S. G. Meneses et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Deciphering the Rhizosphere Microbiome for Disease-Suppressive Bacteria

(2011) R. Mendes et al.   SCIENCE

Second Messenger-Mediated Adjustment of Bacterial Swimming Velocity

(2010) Alex Boehm et al.   CELL

Herbaspirillum seropedicae rfbBandrfbCgenes are required for maize colonization

(2010) Eduardo Balsanelli et al.   ENVIRONMENTAL MICROBIOLOGY

CsrA and Cra Influence Shigella flexneri Pathogenesis

(2010) A. L. Gore et al.   INFECTION AND IMMUNITY

Novel Members of the Cra Regulon Involved in Carbon Metabolism in Escherichia coli

(2010) T. Shimada et al.   JOURNAL OF BACTERIOLOGY

The biofilm matrix

(2010) Hans-Curt Flemming et al.   NATURE REVIEWS MICROBIOLOGY

Complex regulatory network encompassing the Csr, c-di-GMP and motility systems ofSalmonellaTyphimurium

(2009) Kristina Jonas et al.   ENVIRONMENTAL MICROBIOLOGY

Coordinated Regulation of Virulence during Systemic Infection of Salmonella enterica Serovar Typhimurium

(2009) Hyunjin Yoon et al.   PLoS Pathogens

Effect of cra gene knockout together with edd and iclR genes knockout on the metabolism in Escherichia coli

(2008) Dayanidhi Sarkar et al.   ARCHIVES OF MICROBIOLOGY

The exopolysaccharide ofRhizobiumsp. YAS34 is not necessary for biofilm formation onArabidopsis thalianaandBrassica napusroots but contributes to root colonization

(2008) Catherine Santaella et al.   ENVIRONMENTAL MICROBIOLOGY

Comparison of Carbon Nutrition for Pathogenic and Commensal Escherichia coli Strains in the Mouse Intestine

(2008) A. J. Fabich et al.   INFECTION AND IMMUNITY

Campylobacter jejuni CsrA Mediates Oxidative Stress Responses, Biofilm Formation, and Host Cell Invasion

(2008) J. A. Fields et al.   JOURNAL OF BACTERIOLOGY

The RNA binding protein CsrA controls cyclic di-GMP metabolism by directly regulating the expression of GGDEF proteins

(2008) Kristina Jonas et al.   MOLECULAR MICROBIOLOGY