Genomics: A potential panacea for the perennial problem

Fast and Cost-Effective Genetic Mapping in Apple Using Next-Generation Sequencing

(2014) K. M. Gardner et al.   G3-Genes Genomes Genetics

Saturated linkage map construction in Rubus idaeus using genotyping by sequencing and genome-independent imputation

(2013) Judson A Ward et al.   BMC GENOMICS

The columnar mutation (“Co gene”) of apple (Malus × domestica) is associated with an integration of a Gypsy-like retrotransposon

(2013) Dominik Otto et al.   MOLECULAR BREEDING

Oil palm genome sequence reveals divergence of interfertile species in Old and New worlds

(2013) Rajinder Singh et al.   NATURE

Feeding the future

(2013) Susan McCouch et al.   NATURE

The high-quality draft genome of peach (Prunus persica) identifies unique patterns of genetic diversity, domestication and genome evolution

(2013) Ignazio Verde et al.   NATURE GENETICS

Genomics Assisted Ancestry Deconvolution in Grape

(2013) Jason Sawler et al.   PLoS One

Grapevine powdery mildew resistance and susceptibility loci identified on a high-resolution SNP map

(2013) Paola Barba et al.   THEORETICAL AND APPLIED GENETICS

Improving fruit and wine: what does genomics have to offer?

(2013) Sean Myles   TRENDS IN GENETICS

Reconstructing the Population Genetic History of the Caribbean

(2013) Andrés Moreno-Estrada et al.   PLoS Genetics

Annual vs. perennial grain production

(2012) David Pimentel et al.   AGRICULTURE ECOSYSTEMS & ENVIRONMENT

Applications of next-generation sequencing in plant biology

(2012) Ashley N. Egan et al.   AMERICAN JOURNAL OF BOTANY

Ranking the value of germplasm: new oil palm (Elaeis guineensis) breeding stocks as a case study

(2012) S. Wening et al.   ANNALS OF APPLIED BIOLOGY

The banana (Musa acuminata) genome and the evolution of monocotyledonous plants

(2012) Angélique D’Hont et al.   NATURE

The draft genome of sweet orange (Citrus sinensis)

(2012) Qiang Xu et al.   NATURE GENETICS

Genomic Selection for Fruit Quality Traits in Apple (Malus×domestica Borkh.)

(2012) Satish Kumar et al.   PLoS One

Development of a RAPD-derived SCAR marker associated with tall-type palm trait in coconut

(2012) M.K. Rajesh et al.   SCIENTIA HORTICULTURAE

Inheritance of resistance to coffee wilt disease (Fusarium xylarioides Steyaert) in Robusta coffee (Coffea canephora Pierre) and breeding perspectives

(2012) Pascal C. Musoli et al.   Tree Genetics & Genomes

Genotyping-by-Sequencing for Plant Breeding and Genetics

(2012) Jesse A. Poland et al.   Plant Genome

From forest to field: Perennial fruit crop domestication

(2011) Allison J. Miller et al.   AMERICAN JOURNAL OF BOTANY

Genetic structure and core collection of the World Olive Germplasm Bank of Marrakech: towards the optimised management and use of Mediterranean olive genetic resources

(2011) Hicham Haouane et al.   GENETICA

Application of a high-speed breeding technology to apple (Malus × domestica) based on transgenic early flowering plants and marker-assisted selection

(2011) Henryk Flachowsky et al.   NEW PHYTOLOGIST

Climate change, plant diseases and food security: an overview

(2011) S. Chakraborty et al.   PLANT PATHOLOGY

A Robust, Simple Genotyping-by-Sequencing (GBS) Approach for High Diversity Species

(2011) Robert J. Elshire et al.   PLoS One

Genetic structure and domestication history of the grape

(2011) Sean Myles et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Development of marker sets useful in the early selection of Ren4 powdery mildew resistance and seedlessness for table and raisin grape breeding

(2011) Siraprapa Mahanil et al.   THEORETICAL AND APPLIED GENETICS

Towards genomic selection in apple (Malus × domestica Borkh.) breeding programmes: Prospects, challenges and strategies

(2011) Satish Kumar et al.   Tree Genetics & Genomes

Population genetics of genomics-based crop improvement methods

(2011) Martha T. Hamblin et al.   TRENDS IN GENETICS

A candidate gene association study on muscat flavor in grapevine (Vitis vinifera L.)

(2010) Francesco Emanuelli et al.   BMC PLANT BIOLOGY

Seed and pollen transmission of Apple latent spherical virus in apple

(2010) Kazuya Nakamura et al.   JOURNAL OF GENERAL PLANT PATHOLOGY

The genome of Theobroma cacao

(2010) Xavier Argout et al.   NATURE GENETICS

The genome of the domesticated apple (Malus × domestica Borkh.)

(2010) Riccardo Velasco et al.   NATURE GENETICS

Promotion of flowering and reduction of a generation time in apple seedlings by ectopical expression of the Arabidopsis thaliana FT gene using the Apple latent spherical virus vector

(2010) Noriko Yamagishi et al.   PLANT MOLECULAR BIOLOGY

Increased Food and Ecosystem Security via Perennial Grains

(2010) J. D. Glover et al.   SCIENCE

Using a limited mapping strategy to identify major QTLs for resistance to grapevine powdery mildew (Erysiphe necator) and their use in marker-assisted breeding

(2010) S. Riaz et al.   THEORETICAL AND APPLIED GENETICS

Genomic selection in forest tree breeding

(2010) Dario Grattapaglia et al.   Tree Genetics & Genomes

A review on transgenic approaches to accelerate breeding of woody plants

(2009) H. Flachowsky et al.   PLANT BREEDING

Association Mapping: Critical Considerations Shift from Genotyping to Experimental Design

(2009) S. Myles et al.   PLANT CELL

Genome-wide patterns of population structure and admixture in West Africans and African Americans

(2009) K. Bryc et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Geographic and genetic structure of African oil palm diversity suggests new approaches to breeding

(2009) Benoît Cochard et al.   Tree Genetics & Genomes

Apple latent spherical virus vectors for reliable and effective virus-induced gene silencing among a broad range of plants including tobacco, tomato, Arabidopsis thaliana, cucurbits, and legumes

(2009) Aki Igarashi et al.   VIROLOGY

Construction of nested genetic core collections to optimize the exploitation of natural diversity in Vitis vinifera L. subsp sativa

(2008) Loic Le Cunff et al.   BMC PLANT BIOLOGY

Current status of coffee (Coffea arabica L.) genetic resources in Ethiopia: implications for conservation

(2008) Jean-Pierre Labouisse et al.   GENETIC RESOURCES AND CROP EVOLUTION

Challenges for effective marker-assisted selection in plants

(2008) Frédéric Hospital   GENETICA

Diversity in coffee assessed with SSR markers: structure of the genus Coffea and perspectives for breeding

(2008) Philippe Cubry et al.   GENOME

The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus)

(2008) Ray Ming et al.   NATURE

Geographic and Genetic Population Differentiation of the Amazonian Chocolate Tree (Theobroma cacao L)

(2008) Juan C. Motamayor et al.   PLoS One

Genetic diversity and structure of farm and GenBank accessions of cacao (Theobroma cacao L.) in Cameroon revealed by microsatellite markers

(2008) Ives Bruno M. Efombagn et al.   Tree Genetics & Genomes