A microorganisms’ journey between plant generations

Ecophylogeny of the endospheric root fungal microbiome of co-occurring Agrostis stolonifera

(2017) Amandine Lê Van et al.   PeerJ

It’s the song, not the singer: an exploration of holobiosis and evolutionary theory

(2016) W. Ford Doolittle et al.   BIOLOGY & PHILOSOPHY

A phylum-level phylogenetic classification of zygomycete fungi based on genome-scale data

(2016) Joseph W. Spatafora et al.   MYCOLOGIA

Regulation of sugar transporter activity for antibacterial defense in Arabidopsis

(2016) Kohji Yamada et al.   SCIENCE

AM fungi patchiness and the clonal growth of Glechoma hederacea in heterogeneous environments

(2016) Nathan Vannier et al.   Scientific Reports

Getting the Hologenome Concept Right: an Eco-Evolutionary Framework for Hosts and Their Microbiomes

(2016) Kevin R. Theis et al.   mSystems

Soil volatile analysis by proton transfer reaction-time of flight mass spectrometry (PTR-TOF-MS)

(2015) Stefano Mancuso et al.   APPLIED SOIL ECOLOGY

The importance of the microbiome of the plant holobiont

(2015) Philippe Vandenkoornhuyse et al.   NEW PHYTOLOGIST

Structure, variation, and assembly of the root-associated microbiomes of rice

(2015) Joseph Edwards et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Hologenome Concept: Helpful or Hollow?

(2015) Nancy A. Moran et al.   PLOS BIOLOGY

Host Biology in Light of the Microbiome: Ten Principles of Holobionts and Hologenomes

(2015) Seth R. Bordenstein et al.   PLOS BIOLOGY

Partner selection in the mycorrhizal mutualism

(2014) Gijsbert D. A. Werner et al.   NEW PHYTOLOGIST

Swarm: robust and fast clustering method for amplicon-based studies

(2014) Frédéric Mahé et al.   PeerJ

Structure and Functions of the Bacterial Microbiota of Plants

(2013) Davide Bulgarelli et al.   Annual Review of Plant Biology

Development of a Dual-Index Sequencing Strategy and Curation Pipeline for Analyzing Amplicon Sequence Data on the MiSeq Illumina Sequencing Platform

(2013) James J. Kozich et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Diversity and heritability of the maize rhizosphere microbiome under field conditions

(2013) J. A. Peiffer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Quantitative divergence of the bacterial root microbiota in Arabidopsis thaliana relatives

(2013) K. Schlaeppi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Defining the core Arabidopsis thaliana root microbiome

(2012) Derek S. Lundberg et al.   NATURE

Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota

(2012) Davide Bulgarelli et al.   NATURE

Mycorrhizal Networks: Common Goods of Plants Shared under Unequal Terms of Trade

(2012) F. Walder et al.   PLANT PHYSIOLOGY

The rhizosphere microbiome and plant health

(2012) Roeland L. Berendsen et al.   TRENDS IN PLANT SCIENCE

The biology of strigolactones

(2012) Carolien Ruyter-Spira et al.   TRENDS IN PLANT SCIENCE

FLASH: fast length adjustment of short reads to improve genome assemblies

(2011) T. Magoc et al.   BIOINFORMATICS

Reciprocal Rewards Stabilize Cooperation in the Mycorrhizal Symbiosis

(2011) E. T. Kiers et al.   SCIENCE

SYNTHESIS: The role of adaptive trans-generational plasticity in biological invasions of plants

(2010) Andrew R. Dyer et al.   Evolutionary Applications

Socialism in soil? The importance of mycorrhizal fungal networks for facilitation in natural ecosystems

(2009) Marcel G. A. van der Heijden et al.   JOURNAL OF ECOLOGY

Does niche overlap control relative abundance in French lacustrine fish communities? A new method incorporating functional traits

(2008) Norman W. H. Mason et al.   JOURNAL OF ANIMAL ECOLOGY

Nonself vegetative fusion and genetic exchange in the arbuscular mycorrhizal fungus Glomus intraradices

(2008) Daniel Croll et al.   NEW PHYTOLOGIST