Application of omics technologies for a deeper insight into quali-quantitative production traits in broiler chickens: A review

Differential expression of growth and immunity related genes influenced by in ovo supplementation of amino acids in broiler chickens

(2018) S.K. Bhanja et al.   CZECH JOURNAL OF ANIMAL SCIENCE

High resolution magic angle spinning NMR spectroscopy reveals that pectoralis muscle dystrophy in chicken is associated with reduced muscle content of anserine and carnosine

(2017) Ulrik K. Sundekilde et al.   FOOD CHEMISTRY

Molecular characterization of neuropeptide Y (NPY) receptors (Y1, Y4 and Y6) and investigation of the tissue expression of their ligands (NPY, PYY and PP) in chickens

(2017) Shunyu Gao et al.   GENERAL AND COMPARATIVE ENDOCRINOLOGY

Immunogenetics applied to control salmonellosis in chicken: a review

(2017) Reza Tohidi et al.   JOURNAL OF APPLIED ANIMAL RESEARCH

Gut Hormones and Regulation of Food Intake in Birds

(2017) Kazuhisa Honda et al.   JOURNAL OF POULTRY SCIENCE

Threonine, arginine, and glutamine: Influences on intestinal physiology, immunology, and microbiology in broilers

(2017) C Bortoluzzi et al.   POULTRY SCIENCE

Meat quality traits and proteome profile of woody broiler breast (pectoralis major) meat

(2017) K Cai et al.   POULTRY SCIENCE

Selection for pro-inflammatory mediators produces chickens more resistant to Campylobacter jejuni

(2017) C. L. Swaggerty et al.   POULTRY SCIENCE

Lysolecithin as feed additive enhances collagen expression and villus length in the jejunum of broiler chickens

(2017) D. L. Brautigan et al.   POULTRY SCIENCE

Proteomic analysis reveals changes in carbohydrate and protein metabolism associated with broiler breast myopathy

(2017) Vivek A. Kuttappan et al.   POULTRY SCIENCE

Allelic variation in TLR4 is linked to resistance to Salmonella Enteritidis infection in chickens

(2017) Peng Li et al.   POULTRY SCIENCE

Dietary Allium hookeri reduces inflammatory response and increases expression of intestinal tight junction proteins in LPS-induced young broiler chicken

(2017) Youngsub Lee et al.   RESEARCH IN VETERINARY SCIENCE

Proteogenomics Reveals Enriched Ribosome Assembly and Protein Translation in Pectoralis major of High Feed Efficiency Pedigree Broiler Males

(2017) Walter G. Bottje et al.   Frontiers in Physiology

Effect of dietary supplementation with Lactobacillus acidophilus D2/CSL (CECT 4529) on caecum microbioma and productive performance in broiler chickens

(2017) Alessandra De Cesare et al.   PLoS One

The role of host genetic factors and host immunity in necrotic enteritis

(2016) Sung T. Oh et al.   AVIAN PATHOLOGY

Genetic parameters of white striping in relation to body weight, carcass composition, and meat quality traits in two broiler lines divergently selected for the ultimate pH of the pectoralis major muscle

(2016) Nabeel Alnahhas et al.   BMC GENETICS

The genomic architecture of resistance to Campylobacter jejuni intestinal colonisation in chickens

(2016) A. Psifidi et al.   BMC GENOMICS

Probiotic (Enterococcus faecium) induced responses of the hepatic proteome improves metabolic efficiency of broiler chickens (Gallus gallus)

(2016) Aijuan Zheng et al.   BMC GENOMICS

Exploratory transcriptomic analysis in muscle tissue of broilers fed a phytase-supplemented diet

(2016) J. Schmeisser et al.   JOURNAL OF ANIMAL PHYSIOLOGY AND ANIMAL NUTRITION

Serum and Muscle Metabolomics for the Prediction of Ultimate pH, a Key Factor for Chicken-Meat Quality

(2016) Stéphane Beauclercq et al.   JOURNAL OF PROTEOME RESEARCH

Differential expression of feeding-related hypothalamic neuropeptides in the first generation of quails divergently selected for low or high feed efficiency

(2016) Kaley Blankenship et al.   NEUROPEPTIDES

White striping and woody breast myopathies in the modern poultry industry: a review

(2016) V. A. Kuttappan et al.   POULTRY SCIENCE

Detection of differentially expressed genes in broiler pectoralis major muscle affected by White Striping – Wooden Breast myopathies

(2016) Paolo Zambonelli et al.   POULTRY SCIENCE

Effect of white striping myopathy on breast muscle(Pectoralis major)protein turnover and gene expression in broilers

(2016) Karen Vignale et al.   POULTRY SCIENCE

Effects of dietary methionine on growth performance, meat quality and oxidative status of breast muscle in fast- and slow-growing broilers

(2016) C. Wen et al.   POULTRY SCIENCE

Brief review of the chicken Major Histocompatibility Complex: the genes, their distribution on chromosome 16, and their contributions to disease resistance

(2016) Marcia M. Miller et al.   POULTRY SCIENCE

Inositol - An effective growth promotor?

(2016) S.A. LEE et al.   WORLDS POULTRY SCIENCE JOURNAL

Bacteria within the Gastrointestinal Tract Microbiota Correlated with Improved Growth and Feed Conversion: Challenges Presented for the Identification of Performance Enhancing Probiotic Bacteria

(2016) Dragana Stanley et al.   Frontiers in Microbiology

Proteomics of Breast Muscle Tissue Associated with the Phenotypic Expression of Feed Efficiency within a Pedigree Male Broiler Line: I. Highlight on Mitochondria

(2016) Byung-Whi Kong et al.   PLoS One

Oxidative Stress and Metabolic Perturbations in Wooden Breast Disorder in Chickens

(2016) Behnam Abasht et al.   PLoS One

Histopathologic and Myogenic Gene Expression Changes Associated with Wooden Breast in Broiler Breast Muscles

(2015) Sandra G. Velleman et al.   AVIAN DISEASES

Selenium Deficiency Downregulates Selenoproteins and Suppresses Immune Function in Chicken Thymus

(2015) Pervez Ahmed Khoso et al.   BIOLOGICAL TRACE ELEMENT RESEARCH

Selenium Deficiency Mainly Influences Antioxidant Selenoproteins Expression in Broiler Immune Organs

(2015) Zijiang Yang et al.   BIOLOGICAL TRACE ELEMENT RESEARCH

Characterization of a novel chicken muscle disorder through differential gene expression and pathway analysis using RNA-sequencing

(2015) Marie F Mutryn et al.   BMC GENOMICS

Fine mapping of QTL and genomic prediction using allele-specific expression SNPs demonstrates that the complex trait of genetic resistance to Marek’s disease is predominantly determined by transcriptional regulation

(2015) Hans H. Cheng et al.   BMC GENOMICS

Messenger RNA sequencing and pathway analysis provide novel insights into the biological basis of chickens’ feed efficiency

(2015) Nan Zhou et al.   BMC GENOMICS

Upregulation ofNRAMP1mRNA confirms its role in enhanced host immunity in post-artificial infections ofSalmonella enteritidisin chicks

(2015) Y. Hu et al.   BRITISH POULTRY SCIENCE

Genome-wide association study of meat quality traits in chicken

(2015) T. Zhang et al.   GENETICS AND MOLECULAR RESEARCH

Erratum to: Effects of heat stress on the gene expression of nutrient transporters in the jejunum of broiler chickens (Gallus gallus domesticus)

(2015) Xiaolei Sun et al.   INTERNATIONAL JOURNAL OF BIOMETEOROLOGY

Large-scale investigation of the parameters in response to Eimeria maxima challenge in broilers

(2015) E. Hamzic et al.   JOURNAL OF ANIMAL SCIENCE

25-Hydroxycholecalciferol Enhances Male Broiler Breast Meat Yield through the mTOR Pathway

(2015) Karen Vignale et al.   JOURNAL OF NUTRITION

Influence of dietary fat sources and lysolecithin on growth performance, visceral organ size, and histological intestinal alteration in broiler chickens

(2015) D. Khonyoung et al.   Livestock Science

Transcriptomic analysis to elucidate the molecular mechanisms that underlie feed efficiency in meat-type chickens

(2015) Jeeyoung Lee et al.   MOLECULAR GENETICS AND GENOMICS

Branched-chain amino acids modulate the expression of hepatic fatty acid metabolism-related genes in female broiler chickens

(2015) Jie Bai et al.   MOLECULAR NUTRITION & FOOD RESEARCH

Selection for pro-inflammatory mediators produces chickens more resistant toEimeria tenella

(2015) C. L. Swaggerty et al.   POULTRY SCIENCE

Selection for pro-inflammatory mediators produces chickens more resistant toClostridium perfringens-induced necrotic enteritis

(2015) C. L. Swaggerty et al.   POULTRY SCIENCE

Effects of dietary fiber on cecal short-chain fatty acid and cecal microbiota of broiler and laying-hen chicks

(2015) M. Walugembe et al.   POULTRY SCIENCE

The genetic basis of pectoralis major myopathies in modern broiler chicken lines

(2015) Richard A. Bailey et al.   POULTRY SCIENCE

Modulation of small intestinal phosphate transporter by dietary supplements of mineral phosphorus and phytase in broilers

(2015) Korinna Huber et al.   POULTRY SCIENCE

Effects of dietary selenium on host response to necrotic enteritis in young broilers

(2015) Shouzhen Xu et al.   RESEARCH IN VETERINARY SCIENCE

Meat quality in fast-growing broiler chickens

(2015) M. PETRACCI et al.   WORLDS POULTRY SCIENCE JOURNAL

Immunomodulatory role of probiotics in poultry and potentialin ovoapplication

(2015) C.M. Cox et al.   Beneficial Microbes

News in livestock research — use of Omics -technologies to study the microbiota in the gastrointestinal tract of farm animals

(2015) Simon Deusch et al.   Computational and Structural Biotechnology Journal

Proteome changes underpin improved meat quality and yield of chickens (Gallus gallus) fed the probiotic Enterococcus faecium

(2015) Aijuan Zheng et al.   BMC GENOMICS

Transcriptome Analysis of Post-Hatch Breast Muscle in Legacy and Modern Broiler Chickens Reveals Enrichment of Several Regulators of Myogenic Growth

(2015) Richard V. N. Davis et al.   PLoS One

RNA-Seq Analysis of Abdominal Fat Reveals Differences between Modern Commercial Broiler Chickens with High and Low Feed Efficiencies

(2015) Zhu Zhuo et al.   PLoS One

Impact of Selection for Digestive Efficiency on Microbiota Composition in the Chicken

(2015) Sandrine Mignon-Grasteau et al.   PLoS One

Biology of the gastro-intestinal tract in poultry

(2014) Colin G. Scanes et al.   Avian Biology Research

Selenium Deficiency Influences the Gene Expressions of Heat Shock Proteins and Nitric Oxide Levels in Neutrophils of Broilers

(2014) Xi Chen et al.   BIOLOGICAL TRACE ELEMENT RESEARCH

Successional changes in the chicken cecal microbiome during 42 days of growth are independent of organic acid feed additives

(2014) Brian B Oakley et al.   BMC Veterinary Research

Nutrigenetics of carotenoid metabolism in the chicken: a polymorphism at the β,β-carotene 15,15'-mono-oxygenase 1 (BCMO1) locus affects the response to dietary β-carotene

(2014) Maamer Jlali et al.   BRITISH JOURNAL OF NUTRITION

Supplemental dietary l-arginine attenuates intestinal mucosal disruption during a coccidial vaccine challenge in broiler chickens

(2014) Jianzhuang Tan et al.   BRITISH JOURNAL OF NUTRITION

Methionine improves breast muscle growth and alters myogenic gene expression in broilers

(2014) C. Wen et al.   JOURNAL OF ANIMAL SCIENCE

Dietary L-arginine modulates immunosuppression in broilers inoculated with an intermediate strain of infectious bursa disease virus

(2014) Jian-Zhuang Tan et al.   JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE

Expression profile of hypothalamic neuropeptides in chicken lines selected for high or low residual feed intake

(2014) P. Sintubin et al.   NEUROPEPTIDES

Effects of in ovo injection with selenium on immune and antioxidant responses during experimental necrotic enteritis in broiler chickens1

(2014) S. H. Lee et al.   POULTRY SCIENCE

Selection for pro-inflammatory mediators yields chickens with increased resistance against Salmonella enterica serovar Enteritidis

(2014) Christina L. Swaggerty et al.   POULTRY SCIENCE

Milestones in avian coccidiosis research: A review

(2014) H. D. Chapman   POULTRY SCIENCE

Growth, efficiency, and yield of commercial broilers from 1957, 1978, and 20051

(2014) M. J. Zuidhof et al.   POULTRY SCIENCE

Quantity and functionality of protein fractions in chicken breast fillets affected by white striping

(2014) S. Mudalal et al.   POULTRY SCIENCE

Immune and anti-oxidant effects of in ovo selenium proteinate on post-hatch experimental avian necrotic enteritis

(2014) Sung Hyen Lee et al.   VETERINARY PARASITOLOGY

Dietary L-arginine supplementation reduces abdominal fat content by modulating lipid metabolism in broiler chickens

(2013) A. M. Fouad et al.   Animal

Comparison and contrast of genes and biological pathways responding to Marek’s disease virus infection using allele-specific expression and differential expression in broiler and layer chickens

(2013) Sudeep Perumbakkam et al.   BMC GENOMICS

The identification of 14 new genes for meat quality traits in chicken using a genome-wide association study

(2013) Yanfa Sun et al.   BMC GENOMICS

Methionine improves the performance and breast muscle growth of broilers with lower hatching weight by altering the expression of genes associated with the insulin-like growth factor-I signalling pathway

(2013) Chao Wen et al.   BRITISH JOURNAL OF NUTRITION

Dietary l-arginine supplementation attenuates lipopolysaccharide-induced inflammatory response in broiler chickens

(2013) Jianzhuang Tan et al.   BRITISH JOURNAL OF NUTRITION

Comparison of gene expression profiles of the jejunum of broilers supplemented with a yeast cell wall-derived mannan oligosaccharide versus bacitractin methylene disalicylate

(2013) K.M. Brennan et al.   BRITISH POULTRY SCIENCE

Proteome changes in the intestinal mucosa of broiler (Gallus gallus) activated by probiotic Enterococcus faecium

(2013) Jianjie Luo et al.   Journal of Proteomics

High resolution mass spectrometry based techniques at the crossroads of metabolic pathways

(2013) Christophe Junot et al.   MASS SPECTROMETRY REVIEWS

Genome-Wide Association Study Identifies Loci and Candidate Genes for Body Composition and Meat Quality Traits in Beijing-You Chickens

(2013) Ranran Liu et al.   PLoS One

Dietary Curcuma longa enhances resistance against Eimeria maxima and Eimeria tenella infections in chickens

(2013) D. K. Kim et al.   POULTRY SCIENCE

Immune effects of dietary anethole on Eimeria acervulina infection

(2013) D. K. Kim et al.   POULTRY SCIENCE

Comparison of hematologic and serologic profiles of broiler birds with normal and severe degrees of white striping in breast fillets

(2013) V. A. Kuttappan et al.   POULTRY SCIENCE

Integrated Genomic Approaches to Enhance Genetic Resistance in Chickens

(2013) Hans H. Cheng et al.   Annual Review of Animal Biosciences

Present and Future Challenges in Food Analysis: Foodomics

(2012) Virginia García-Cañas et al.   ANALYTICAL CHEMISTRY

Intestinal microbiota associated with differential feed conversion efficiency in chickens

(2012) Dragana Stanley et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Improved resistance to Eimeria acervulina infection in chickens due to dietary supplementation with garlic metabolites

(2012) Duk Kyung Kim et al.   BRITISH JOURNAL OF NUTRITION

Metabolomics platforms for genome wide association studies—linking the genome to the metabolome

(2012) Jerzy Adamski et al.   CURRENT OPINION IN BIOTECHNOLOGY

A mutation in the promoter of the chicken β,β-carotene 15,15′-monooxygenase 1 gene alters xanthophyll metabolism through a selective effect on its mRNA abundance in the breast muscle1

(2012) M. Jlali et al.   JOURNAL OF ANIMAL SCIENCE

Use of 25-hydroxycholecalciferol in Diets of Broiler Chickens: Effects on Growth Performance, Immunity and Bone Calcification

(2012) Gabriela G^|^oacute;mez-Verduzco et al.   JOURNAL OF POULTRY SCIENCE

Mass spectrometry and animal science: Protein identification strategies and particularities of farm animal species

(2012) Renata Soares et al.   Journal of Proteomics

Meat science: From proteomics to integrated omics towards system biology

(2012) Angelo D'Alessandro et al.   Journal of Proteomics

Epigenetic Modification of TLRs in Leukocytes Is Associated with Increased Susceptibility to Salmonella enteritidis in Chickens

(2012) Zhongyong Gou et al.   PLoS One

Effects of yeast cell wall-derived mannan-oligosaccharides on jejunal gene expression in young broiler chickens

(2012) R. Xiao et al.   POULTRY SCIENCE

Gene expression in breast muscle associated with feed efficiency in a single male broiler line using a chicken 44K microarray. II. Differentially expressed focus genes

(2012) W. G. Bottje et al.   POULTRY SCIENCE

Protein expression in pectoral skeletal muscle of chickens as influenced by dietary methionine1

(2012) W. Zhai et al.   POULTRY SCIENCE

Genome-Wide Identification and Quantification of cis- and trans-Regulated Genes Responding to Marek’s Disease Virus Infection via Analysis of Allele-Specific Expression

(2012) Sean MacEachern et al.   Frontiers in Genetics

Toward integrative genomics study of genetic resistance to Salmonella and Campylobacter intestinal colonization in fowl

(2012) Fanny Calenge et al.   Frontiers in Genetics

Dietary Selenium Affects Selenoprotein W Gene Expression in the Liver of Chicken

(2011) Bo Sun et al.   BIOLOGICAL TRACE ELEMENT RESEARCH

Effects of Dietary Selenium on Selenoprotein W Gene Expression in the Chicken Immune Organs

(2011) Dong Yu et al.   BIOLOGICAL TRACE ELEMENT RESEARCH

Transcriptional profiling identifies differentially expressed genes in developing turkey skeletal muscle

(2011) Kelly RB Sporer et al.   BMC GENOMICS

Skeletal muscle proteomics in livestock production

(2011) B. Picard et al.   Briefings in Functional Genomics

Shift in chicken intestinal gene association networks after infection with Salmonella

(2011) Dirkjan Schokker et al.   Comparative Biochemistry and Physiology D-Genomics & Proteomics

MiRNA expression signatures induced by Marek's disease virus infection in chickens

(2011) Fei Tian et al.   GENOMICS

Modulation of glycogen and breast meat processing ability by nutrition in chickens: Effect of crude protein level in 2 chicken genotypes1

(2011) M. Jlali et al.   JOURNAL OF ANIMAL SCIENCE

Detection of a Cis eQTL Controlling BMCO1 Gene Expression Leads to the Identification of a QTG for Chicken Breast Meat Color

(2011) Elisabeth Le Bihan-Duval et al.   PLoS One

Gene expression in breast muscle associated with feed efficiency in a single male broiler line using a chicken 44K oligo microarray. I. Top differentially expressed genes

(2011) B.- W. Kong et al.   POULTRY SCIENCE

Effects of dietary supplementation with phytonutrients on vaccine-stimulated immunity against infection with Eimeria tenella

(2011) Sung Hyen Lee et al.   VETERINARY PARASITOLOGY

Manipulating tissue metabolism by amino acids

(2011) S. TESSERAUD et al.   WORLDS POULTRY SCIENCE JOURNAL

Selenoprotein W gene expression in the gastrointestinal tract of chicken is affected by dietary selenium

(2010) Jin-Long Li et al.   BIOMETALS

Effect of Dietary Curcuma, Capsicum, and Lentinus, on Enhancing Local Immunity against Eimeria acervulina Infection

(2010) Sung Hyen Lee et al.   JOURNAL OF POULTRY SCIENCE

Hypothalamic Melanocortin System on Feeding Regulation in Birds: A Review

(2010) Takashi Bungo et al.   JOURNAL OF POULTRY SCIENCE

Investigation of mitochondrial protein expression and oxidation in heart muscle in low and high feed efficient male broilers in a single genetic line

(2010) N. Tinsley et al.   POULTRY SCIENCE

QTL for resistance toSalmonellacarrier state confirmed in both experimental and commercial chicken lines

(2009) F. Calenge et al.   ANIMAL GENETICS

The Role of Probiotics in the Poultry Industry

(2009) S. M. Lutful Kabir   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Mitochondrial proton leak kinetics and relationship with feed efficiency within a single genetic line of male broilers

(2009) W. Bottje et al.   POULTRY SCIENCE

High-throughput gene expression analysis of intestinal intraepithelial lymphocytes after oral feeding of carvacrol, cinnamaldehyde, or Capsicum oleoresin

(2009) D. K. Kim et al.   POULTRY SCIENCE

Transcriptional analysis of host responses to Marek’s disease virus infection in genetically resistant and susceptible chickens

(2008) A. J. Sarson et al.   ANIMAL GENETICS

Association of mitochondrial function and feed efficiency in poultry and livestock species1

(2008) W. G. Bottje et al.   JOURNAL OF ANIMAL SCIENCE

Effects of zinc bacitracin, bird age and access to range on bacterial microbiota in the ileum and caeca of broiler chickens

(2008) J. Gong et al.   JOURNAL OF APPLIED MICROBIOLOGY

Daily Variations in Dietary Lysine Content Alter the Expression of Genes Related to Proteolysis in Chicken Pectoralis major Muscle

(2008) Sophie Tesseraud et al.   JOURNAL OF NUTRITION

Increasing Dietary Lysine Increases Final pH and Decreases Drip Loss of Broiler Breast Meat

(2008) C. Berri et al.   POULTRY SCIENCE