Comprehensive Characterization of Simple Sequence Repeats in Eggplant (Solanum melongena L.) Genome and Construction of a Web Resource

Comparison of transcriptome-derived simple sequence repeat (SSR) and single nucleotide polymorphism (SNP) markers for genetic fingerprinting, diversity evaluation, and establishment of relationships in eggplants

(2017) Pietro Gramazio et al.   EUPHYTICA

Coding SNPs analysis highlights genetic relationships and evolution pattern in eggplant complexes

(2017) Alberto Acquadro et al.   PLoS One

Transcriptome analysis and molecular marker discovery in Solanum incanum and S. aethiopicum, two close relatives of the common eggplant (Solanum melongena) with interest for breeding

(2016) P. Gramazio et al.   BMC GENOMICS

Transcriptome analysis of Solanum melongena L. (eggplant) fruit to identify putative allergens and their epitopes

(2016) Kumar Ramagoni Ramesh et al.   GENE

A comprehensive characterization of simple sequence repeats in pepper genomes provides valuable resources for marker development in Capsicum

(2016) Jiaowen Cheng et al.   Scientific Reports

A Genome-Wide Survey of the Microsatellite Content of the Globe Artichoke Genome and the Development of a Web-Based Database

(2016) Ezio Portis et al.   PLoS One

The genome sequence of the outbreeding globe artichoke constructed de novo incorporating a phase-aware low-pass sequencing strategy of F1 progeny

(2016) Davide Scaglione et al.   Scientific Reports

Development and Characterization of Transcription Factor Gene-Derived Microsatellite (TFGM) Markers in Medicago truncatula and Their Transferability in Leguminous and Non-Leguminous Species

(2015) Wenxian Liu et al.   MOLECULES

Comparative transcriptome analysis of eggplant (Solanum melongena L.) and turkey berry (Solanum torvum Sw.): phylogenomics and disease resistance analysis

(2014) Xu Yang et al.   BMC GENOMICS

Motif mismatches in microsatellites: insights from genome-wide investigation among 20 insect species

(2014) S. K. Behura et al.   DNA RESEARCH

Draft Genome Sequence of Eggplant (Solanum melongena L.): the Representative Solanum Species Indigenous to the Old World

(2014) Hideki Hirakawa et al.   DNA RESEARCH

Genome sequence of the hot pepper provides insights into the evolution of pungency in Capsicum species

(2014) Seungill Kim et al.   NATURE GENETICS

First whole genome based microsatellite DNA marker database of tomato for mapping and variety identification

(2013) Mir A Iquebal et al.   BMC PLANT BIOLOGY

Functionally Relevant Microsatellite Markers From Chickpea Transcription Factor Genes for Efficient Genotyping Applications and Trait Association Mapping

(2013) A. Kujur et al.   DNA RESEARCH

Development and Characterization of Simple Sequence Repeat Markers Providing Genome-Wide Coverage and High Resolution in Maize

(2013) J. Xu et al.   DNA RESEARCH

Revisiting an important component of plant genomes: microsatellites

(2013) Caihua Gao et al.   FUNCTIONAL PLANT BIOLOGY

The Unstable Repeats—Three Evolving Faces of Neurological Disease

(2013) David L. Nelson et al.   NEURON

Microsatellite Tandem Repeats Are Abundant in Human Promoters and Are Associated with Regulatory Elements

(2013) Sterling Sawaya et al.   PLoS One

Evolutionary Dynamics of Microsatellite Distribution in Plants: Insight from the Comparison of Sequenced Brassica, Arabidopsis and Other Angiosperm Species

(2013) Jiaqin Shi et al.   PLoS One

The Population Structure and Diversity of Eggplant from Asia and the Mediterranean Basin

(2013) Fabio Cericola et al.   PLoS One

Coevolution between simple sequence repeats (SSRs) and virus genome size

(2012) Xiangyan Zhao et al.   BMC GENOMICS

Characterization of interspecific hybrids and first backcross generations from crosses between two cultivated eggplants (Solanum melongena and S. aethiopicum Kumba group) and implications for eggplant breeding

(2012) Jaime Prohens et al.   EUPHYTICA

Phylogeographic relationships among Asian eggplants and new perspectives on eggplant domestication

(2012) Rachel S. Meyer et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

The tomato genome sequence provides insights into fleshy fruit evolution

(2012)   NATURE

A RAD Tag Derived Marker Based Eggplant Linkage Map and the Location of QTLs Determining Anthocyanin Pigmentation

(2012) Lorenzo Barchi et al.   PLoS One

Diversity and Relationships of Eggplants from Three Geographically Distant Secondary Centers of Diversity

(2012) Maria Hurtado et al.   PLoS One

Development of gene-based markers and construction of an integrated linkage map in eggplant by using Solanum orthologous (SOL) gene sets

(2012) Hiroyuki Fukuoka et al.   THEORETICAL AND APPLIED GENETICS

Identification of SNP and SSR markers in eggplant using RAD tag sequencing

(2011) Lorenzo Barchi et al.   BMC GENOMICS

Development and characterization of genomic simple sequence repeat markers in eggplant and their application to the study of diversity and relationships in a collection of different cultivar types and origins

(2011) Santiago Vilanova et al.   MOLECULAR BREEDING

Genome sequence and analysis of the tuber crop potato

(2011) Xun Xu et al.   NATURE

Diversity, relationships, and genetic fingerprinting of the Listada de Gandía eggplant landrace using genomic SSRs and EST-SSRs

(2011) Julio E. Muñoz-Falcón et al.   SCIENTIA HORTICULTURAE

Genome-wide characterization of simple sequence repeats in cucumber (Cucumis sativus L.)

(2010) Pablo F Cavagnaro et al.   BMC GENOMICS

Segregation distortion and linkage analysis in eggplant (Solanum melongena L.)

(2010) Lorenzo Barchi et al.   GENOME

Microsatellite Instability in Arabidopsis Increases with Plant Development

(2010) A. Golubov et al.   PLANT PHYSIOLOGY

Microsatellite repeat instability and neurological disease

(2009) Judith R. Brouwer et al.   BIOESSAYS

Every microsatellite is different: Intrinsic DNA features dictate mutagenesis of common microsatellites present in the human genome

(2009) Kristin A. Eckert et al.   MOLECULAR CARCINOGENESIS

Functional Domain Marker (FDM): an In Silico Demonstration in Solanaceae Using Simple Sequence Repeats (SSRs)

(2009) Ju-Kyung Yu et al.   PLANT MOLECULAR BIOLOGY REPORTER

Gene-based microsatellite development for mapping and phylogeny studies in eggplant

(2008) Anikò Stàgel et al.   BMC GENOMICS