Population genomics shows no distinction between pathogenic Candida krusei and environmental Pichia kudriavzevii: One species, four names
Published 2018 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Population genomics shows no distinction between pathogenic Candida krusei and environmental Pichia kudriavzevii: One species, four names
Authors
Keywords
Centromeres, Introns, Saccharomyces cerevisiae, Phylogenetic analysis, Sequence assembly tools, Candida albicans, Genetic loci, Yeast infections
Journal
PLoS Pathogens
Volume 14, Issue 7, Pages e1007138
Publisher
Public Library of Science (PLoS)
Online
2018-07-20
DOI
10.1371/journal.ppat.1007138
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Patterns of Genomic Variation in the Opportunistic Pathogen Candida glabrata Suggest the Existence of Mating and a Secondary Association with Humans
- (2018) Laia Carreté et al. CURRENT BIOLOGY
- Evolutionary instability of CUG-Leu in the genetic code of budding yeasts
- (2018) Tadeusz Krassowski et al. Nature Communications
- Transcriptome profiling of Issatchenkia orientalis under ethanol stress
- (2018) Yingjie Miao et al. AMB Express
- An Evolutionary Perspective on Yeast Mating-Type Switching
- (2017) Sara J. Hanson et al. GENETICS
- Role of Ectopic Gene Conversion in the Evolution of a Candida krusei Pleiotropic Drug Resistance Transporter Family
- (2017) Erwin Lamping et al. GENETICS
- Molecular basis of antifungal drug resistance in yeasts
- (2017) Florent Morio et al. INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS
- CD101, a long-acting echinocandin, and comparator antifungal agents tested against a global collection of invasive fungal isolates in the SENTRY 2015 Antifungal Surveillance Program
- (2017) Michael A. Pfaller et al. INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS
- Identification of a novel interspecific hybrid yeast from a metagenomic spontaneously inoculated beer sample using Hi-C
- (2017) Caiti Smukowski Heil et al. YEAST
- Whole Genome Sequence of the Heterozygous Clinical Isolate Candida krusei 81-B-5
- (2017) Christina A. Cuomo et al. G3-Genes Genomes Genetics
- An Evolutionary Perspective on Yeast Mating-Type Switching
- (2017) Sara J. Hanson et al. GENETICS
- Role of Ectopic Gene Conversion in the Evolution of a Candida krusei Pleiotropic Drug Resistance Transporter Family
- (2017) Erwin Lamping et al. GENETICS
- Executive Summary: Clinical Practice Guideline for the Management of Candidiasis: 2016 Update by the Infectious Diseases Society of America
- (2016) Peter G. Pappas et al. CLINICAL INFECTIOUS DISEASES
- Role of CgHOG1 in Stress Responses and Glycerol Overproduction of Candida glycerinogenes
- (2016) Hao Ji et al. CURRENT MICROBIOLOGY
- Centromeres of the YeastKomagataella phaffii(Pichia pastoris)Have a Simple Inverted-Repeat Structure
- (2016) Aisling Y. Coughlan et al. Genome Biology and Evolution
- Yeast diversity of sourdoughs and associated metabolic properties and functionalities
- (2016) Luc De Vuyst et al. INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY
- Comparative genomics of biotechnologically important yeasts
- (2016) Robert Riley et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Evaluation of antimicrobial activity and probiotic properties of wild-strainPichia kudriavzeviiisolated from frozenidlibatter
- (2016) Ramachandran Chelliah et al. YEAST
- Whole Genome Analysis of 132 Clinical Saccharomyces cerevisiae Strains Reveals Extensive Ploidy Variation
- (2016) Yuan O. Zhu et al. G3-Genes Genomes Genetics
- Reconstructing the Backbone of the Saccharomycotina Yeast Phylogeny Using Genome-Scale Data
- (2016) Xing-Xing Shen et al. G3-Genes Genomes Genetics
- Repeat-Associated Fission Yeast-Like Regional Centromeres in the Ascomycetous Budding Yeast Candida tropicalis
- (2016) Gautam Chatterjee et al. PLoS Genetics
- Hydrophobic properties of Candida spp. under the influence of selected essential oils
- (2015) Katarzyna Rajkowska et al. ACTA BIOCHIMICA POLONICA
- BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs
- (2015) Felipe A. Simão et al. BIOINFORMATICS
- Candida inconspicua and Candida norvegensis: New Insights into Identification in Relation to Sexual Reproduction and Genome Organization
- (2015) J. Guitard et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Antifungal activity of cathelicidin peptides against planktonic and biofilm cultures of Candida species isolated from vaginal infections
- (2015) Michele Scarsini et al. PEPTIDES
- Friends or foes: can we make a distinction between beneficial and harmful strains of the Stenotrophomonas maltophilia complex?
- (2015) Gabriele Berg et al. Frontiers in Microbiology
- Declining Incidence of Candidemia and the Shifting Epidemiology of Candida Resistance in Two US Metropolitan Areas, 2008–2013: Results from Population-Based Surveillance
- (2015) Angela Ahlquist Cleveland et al. PLoS One
- Overexpression of Both ERG11 and ABC2 Genes Might Be Responsible for Itraconazole Resistance in Clinical Isolates of Candida krusei
- (2015) Xiaoyuan He et al. PLoS One
- Echinocandin Failure Case Due to a Previously UnreportedFKS1Mutation in Candida krusei
- (2014) Rasmus Hare Jensen et al. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY
- Analyzing the relation between the microbial diversity of DaQu and the turbidity spoilage of traditional Chinese vinegar
- (2014) Pan Li et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- Development of echinocandin resistance in Candida krusei isolates following exposure to micafungin and caspofungin in a BM transplant unit
- (2014) E Tavernier et al. BONE MARROW TRANSPLANTATION
- Comparison of EUCAST and CLSI broth microdilution methods for the susceptibility testing of 10 Systemically active antifungal agents when tested against Candida spp.
- (2014) Michael A. Pfaller et al. DIAGNOSTIC MICROBIOLOGY AND INFECTIOUS DISEASE
- Genetic and phenotypic intra-species variation inCandida albicans
- (2014) Matthew P. Hirakawa et al. GENOME RESEARCH
- Exploiting Issatchenkia orientalis SD108 for succinic acid production
- (2014) Han Xiao et al. Microbial Cell Factories
- IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies
- (2014) Lam-Tung Nguyen et al. MOLECULAR BIOLOGY AND EVOLUTION
- Pilon: An Integrated Tool for Comprehensive Microbial Variant Detection and Genome Assembly Improvement
- (2014) Bruce J. Walker et al. PLoS One
- Complete DNA Sequence of Kuraishia capsulata Illustrates Novel Genomic Features among Budding Yeasts (Saccharomycotina)
- (2013) Lucia Morales et al. Genome Biology and Evolution
- Candida albicans Is Not Always the Preferential Yeast Colonizing Humans: A Study in Wayampi Amerindians
- (2013) Cécile Angebault et al. JOURNAL OF INFECTIOUS DISEASES
- Ignoring Heterozygous Sites Biases Phylogenomic Estimates of Divergence Times: Implications for the Evolutionary History of Microtus Voles
- (2013) Heidi E.L. Lischer et al. MOLECULAR BIOLOGY AND EVOLUTION
- MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
- (2013) K. Katoh et al. MOLECULAR BIOLOGY AND EVOLUTION
- A pipeline for automated annotation of yeast genome sequences by a conserved-synteny approach
- (2012) Estelle Proux-Wéra et al. BMC BIOINFORMATICS
- The Construction of a New Integrative Vector with a New Selective Marker of Copper Resistance for Glycerol Producer Candida glycerinogenes
- (2012) Xiaona Gao et al. CURRENT MICROBIOLOGY
- Genome Sequence of Pichia kudriavzevii M12, a Potential Producer of Bioethanol and Phytase
- (2012) Giek Far Chan et al. EUKARYOTIC CELL
- SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing
- (2012) Anton Bankevich et al. JOURNAL OF COMPUTATIONAL BIOLOGY
- Introns within Ribosomal Protein Genes Regulate the Production and Function of Yeast Ribosomes
- (2011) Julie Parenteau et al. CELL
- The intronome of budding yeasts
- (2011) Cécile Neuvéglise et al. COMPTES RENDUS BIOLOGIES
- Food fermentations: Microorganisms with technological beneficial use
- (2011) François Bourdichon et al. INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY
- One Fungus = One Name: DNA and fungal nomenclature twenty years after PCR
- (2011) John W. Taylor IMA Fungus
- ClinicalCandida kruseiisolates remain susceptible during extensive exposure to antifungal drugs
- (2010) Timo Hautala et al. MEDICAL MYCOLOGY
- New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0
- (2010) Stéphane Guindon et al. SYSTEMATIC BIOLOGY
- The Sequence Alignment/Map format and SAMtools
- (2009) H. Li et al. BIOINFORMATICS
- Fast and accurate short read alignment with Burrows-Wheeler transform
- (2009) H. Li et al. BIOINFORMATICS
- MEME SUITE: tools for motif discovery and searching
- (2009) T. L. Bailey et al. NUCLEIC ACIDS RESEARCH
- Abc1p Is a Multidrug Efflux Transporter That Tips the Balance in Favor of Innate Azole Resistance in Candida krusei
- (2008) E. Lamping et al. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY
- EUCAST Definitive Document EDef 7.1: method for the determination of broth dilution MICs of antifungal agents for fermentative yeasts
- (2008) J.L. Rodriguez-Tudela et al. CLINICAL MICROBIOLOGY AND INFECTION
- Phylogenetic relationships among species ofPichia, IssatchenkiaandWilliopsisdetermined from multigene sequence analysis, and the proposal ofBarnettozymagen. nov.,Lindneragen. nov. andWickerhamomycesgen. nov.
- (2008) Cletus P. Kurtzman et al. FEMS YEAST RESEARCH
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreAdd your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload Now