Inferring potential small molecule–miRNA association based on triple layer heterogeneous network

PSPEL: In Silico Prediction of Self-Interacting Proteins from Amino Acids Sequences Using Ensemble Learning

(2017) Jian-Qiang Li et al.   IEEE-ACM Transactions on Computational Biology and Bioinformatics

MicroRNA-146a induces immune suppression and drug-resistant colorectal cancer cells

(2017) Samaneh Khorrami et al.   TUMOR BIOLOGY

NRDTD: a database for clinically or experimentally supported non-coding RNAs and drug targets associations

(2017) Xing Chen et al.   Database-The Journal of Biological Databases and Curation

Translational reprogramming of colorectal cancer cells induced by 5-fluorouracil through a miRNA-dependent mechanism

(2017) Zeina Bash-Imam et al.   Oncotarget

PBMDA: A novel and effective path-based computational model for miRNA-disease association prediction

(2017) Zhu-Hong You et al.   PLoS Computational Biology

miR-221 Mediates Chemoresistance of Esophageal Adenocarcinoma by Direct Targeting of DKK2 Expression

(2016) Yan Wang et al.   ANNALS OF SURGERY

Sequence-based prediction of protein-protein interactions using weighted sparse representation model combined with global encoding

(2016) Yu-An Huang et al.   BMC BIOINFORMATICS

Small molecule compounds targeting miRNAs for cancer therapy

(2015) Paloma del C. Monroig et al.   ADVANCED DRUG DELIVERY REVIEWS

Identifying novel associations between small molecules and miRNAs based on integrated molecular networks

(2015) Yingli Lv et al.   BIOINFORMATICS

Drug–target interaction prediction: databases, web servers and computational models

(2015) Xing Chen et al.   BRIEFINGS IN BIOINFORMATICS

Targeting c-Met in Cancer by MicroRNAs: Potential Therapeutic Applications in Hepatocellular Carcinoma

(2015) Zeynep F. Karagonlar et al.   DRUG DEVELOPMENT RESEARCH

Drug repositioning by integrating target information through a heterogeneous network model

(2014) Wenhui Wang et al.   BIOINFORMATICS

A Small-Molecule Modulator of the Tumor-Suppressor miR34a Inhibits the Growth of Hepatocellular Carcinoma

(2014) Z. Xiao et al.   CANCER RESEARCH

Small Molecule Inhibitor of Myogenic microRNAs Leads to a Discovery of miR-221/222-myoD-myomiRs Regulatory Pathway

(2014) Su-Bee Tan et al.   CHEMISTRY & BIOLOGY

Extracellular Disposal of Tumor-Suppressor miRs-145 and -34a via Microvesicles and 5-FU Resistance of Human Colon Cancer Cells

(2014) Yukihiro Akao et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Inhibition of lactate dehydrogenase A by microRNA-34a resensitizes colon cancer cells to 5-fluorouracil

(2014) XIANGYONG LI et al.   Molecular Medicine Reports

Computational prediction of microRNA networks incorporating environmental toxicity and disease etiology

(2014) Jie Li et al.   Scientific Reports

MicroRNAs as novel biological targets for detection and regulation

(2013) Jinbo Li et al.   CHEMICAL SOCIETY REVIEWS

Allogeneic T cell responses are regulated by a specific miRNA-mRNA network

(2013) Yaping Sun et al.   JOURNAL OF CLINICAL INVESTIGATION

Constructing and characterizing a bioactive small molecule and microRNA association network for Alzheimer's disease

(2013) F. Meng et al.   Journal of the Royal Society Interface

17β-Estradiol up-regulates miR-155 expression and reduces TP53INP1 expression in MCF-7 breast cancer cells

(2013) Chunmei Zhang et al.   MOLECULAR AND CELLULAR BIOCHEMISTRY

First microRNA mimic enters clinic

(2013) Aaron Bouchie   NATURE BIOTECHNOLOGY

HMDD v2.0: a database for experimentally supported human microRNA and disease associations

(2013) Yang Li et al.   NUCLEIC ACIDS RESEARCH

Text Mining Effectively Scores and Ranks the Literature for Improving Chemical-Gene-Disease Curation at the Comparative Toxicogenomics Database

(2013) Allan Peter Davis et al.   PLoS One

Prediction of microRNAs Associated with Human Diseases Based on Weighted k Most Similar Neighbors

(2013) Ping Xuan et al.   PLoS One

SM2miR: a database of the experimentally validated small molecules' effects on microRNA expression

(2012) X. Liu et al.   BIOINFORMATICS

Iron Homeostasis Regulates the Activity of the MicroRNA Pathway through Poly(C)-Binding Protein 2

(2012) Yujing Li et al.   Cell Metabolism

Liver-specific microRNA-122: Biogenesis and function

(2012) Catherine Jopling   RNA Biology

Identification of links between small molecules and miRNAs in human cancers based on transcriptional responses

(2012) Wei Jiang et al.   Scientific Reports

Prediction of Drug-Target Interactions and Drug Repositioning via Network-Based Inference

(2012) Feixiong Cheng et al.   PLoS Computational Biology

The Tuberculosis Drug Streptomycin as a Potential Cancer Therapeutic: Inhibition of miR-21 Function by Directly Targeting Its Precursor

(2011) Debojit Bose et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

A novel method to quantify gene set functional association based on gene ontology

(2011) S. Lv et al.   Journal of the Royal Society Interface

PREDICT: a method for inferring novel drug indications with application to personalized medicine

(2011) A. Gottlieb et al.   Molecular Systems Biology

Therapeutic target database update 2012: a resource for facilitating target-oriented drug discovery

(2011) F. Zhu et al.   NUCLEIC ACIDS RESEARCH

KEGG for integration and interpretation of large-scale molecular data sets

(2011) M. Kanehisa et al.   NUCLEIC ACIDS RESEARCH

Small molecule enoxacin is a cancer-specific growth inhibitor that acts by enhancing TAR RNA-binding protein 2-mediated microRNA processing

(2011) S. Melo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Small Molecule Modifiers of MicroRNA miR-122 Function for the Treatment of Hepatitis C Virus Infection and Hepatocellular Carcinoma

(2010) Douglas D. Young et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Network medicine: a network-based approach to human disease

(2010) Albert-László Barabási et al.   NATURE REVIEWS GENETICS

DrugBank 3.0: a comprehensive resource for 'Omics' research on drugs

(2010) C. Knox et al.   NUCLEIC ACIDS RESEARCH

PhenomiR: a knowledgebase for microRNA expression in diseases and biological processes

(2010) Andreas Ruepp et al.   GENOME BIOLOGY

Small Molecule Modifiers of the microRNA and RNA Interference Pathway

(2009) Alexander Deiters   AAPS Journal

Clustering of cancer among families of cases with Hodgkin Lymphoma (HL), Multiple Myeloma (MM), Non-Hodgkin's Lymphoma (NHL), Soft Tissue Sarcoma (STS) and control subjects

(2009) Helen H McDuffie et al.   BMC CANCER

MicroRNAs: Target Recognition and Regulatory Functions

(2009) David P. Bartel   CELL

Systematic Evaluation of Drug–Disease Relationships to Identify Leads for Novel Drug Uses

(2009) A P Chiang et al.   CLINICAL PHARMACOLOGY & THERAPEUTICS

MicroRNAs as potential cancer therapeutics

(2009) P Trang et al.   ONCOGENE

Most mammalian mRNAs are conserved targets of microRNAs

(2008) R. C. Friedman et al.   GENOME RESEARCH

miR2Disease: a manually curated database for microRNA deregulation in human disease

(2008) Q. Jiang et al.   NUCLEIC ACIDS RESEARCH

miR-34a repression of SIRT1 regulates apoptosis

(2008) M. Yamakuchi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA