A guide to automated apoptosis detection: How to make sense of imaging flow cytometry data

An open-source solution for advanced imaging flow cytometry data analysis using machine learning

(2017) Holger Hennig et al.   METHODS

Flow Cytometric Single-Cell Identification of Populations in Synthetic Bacterial Communities

(2017) Peter Rubbens et al.   PLoS One

Label-free detection of cellular drug responses by high-throughput bright-field imaging and machine learning

(2017) Hirofumi Kobayashi et al.   Scientific Reports

High-throughput time-stretch imaging flow cytometry for multi-class classification of phytoplankton

(2016) Queenie T. K. Lai et al.   OPTICS EXPRESS

Label-free cell cycle analysis for high-throughput imaging flow cytometry

(2016) Thomas Blasi et al.   Nature Communications

Quantification of CD95-induced apoptosis and NF-κB activation at the single cell level

(2015) Jörn H. Schmidt et al.   JOURNAL OF IMMUNOLOGICAL METHODS

Quantification of apoptosis and necroptosis at the single cell level by a combination of Imaging Flow Cytometry with classical Annexin V/propidium iodide staining

(2015) Sabine Pietkiewicz et al.   JOURNAL OF IMMUNOLOGICAL METHODS

Quantifying small molecule phenotypic effects using mitochondrial morpho-functional fingerprinting and machine learning

(2015) Lionel Blanchet et al.   Scientific Reports

CTLA-4 Blockade Synergizes Therapeutically with PARP Inhibition in BRCA1-Deficient Ovarian Cancer

(2015) T. Higuchi et al.   Cancer Immunology Research

Single-cell technologies for monitoring immune systems

(2014) Pratip K Chattopadhyay et al.   NATURE IMMUNOLOGY

Systems biology of death receptor networks: live and let die

(2014) I N Lavrik   Cell Death & Disease

Challenges of Big Data analysis

(2014) Jianqing Fan et al.   National Science Review

Measuring apoptosis by microscopy and flow cytometry

(2013) Conor M. Henry et al.   METHODS

Class-imbalanced classifiers for high-dimensional data

(2012) W.-J. Lin et al.   BRIEFINGS IN BIOINFORMATICS

A review of feature selection methods on synthetic data

(2012) Verónica Bolón-Canedo et al.   KNOWLEDGE AND INFORMATION SYSTEMS

Distance metrics for high dimensional nearest neighborhood recovery: Compression and normalization

(2011) Stephen L. France et al.   INFORMATION SCIENCES

Dynamics within the CD95 death-inducing signaling complex decide life and death of cells

(2010) Leo Neumann et al.   Molecular Systems Biology

Learning from Imbalanced Data

(2009) Haibo He et al.   IEEE TRANSACTIONS ON KNOWLEDGE AND DATA ENGINEERING

Support Vector Machines and Kernels for Computational Biology

(2008) Asa Ben-Hur et al.   PLoS Computational Biology