Microbial diversity in two traditional bacterial douchi from Gansu province in northwest China using Illumina sequencing

Bacterial diversity in goat milk from the Guanzhong area of China

(2017) Fuxin Zhang et al.   JOURNAL OF DAIRY SCIENCE

New microbial resource: microbial diversity, function and dynamics in Chinese liquor starter

(2017) Yuhong Huang et al.   Scientific Reports

Microbial community compositions in different functional zones of Carrousel oxidation ditch system for domestic wastewater treatment

(2017) Dong Xu et al.   AMB Express

Cigarette smoking and the oral microbiome in a large study of American adults

(2016) Jing Wu et al.   ISME Journal

Characterization of microbiota in Plaisentif cheese by high-throughput sequencing

(2016) Alessandra Dalmasso et al.   LWT-FOOD SCIENCE AND TECHNOLOGY

The Microbiome and Metabolites in Fermented Pu-erh Tea as Revealed by High-Throughput Sequencing and Quantitative Multiplex Metabolite Analysis

(2016) Yongjie Zhang et al.   PLoS One

High-Throughput Sequencing of Microbial Community Diversity and Dynamics during Douchi Fermentation

(2016) Lin Yang et al.   PLoS One

Classification and identification of bacteria in the soil treated by AcMNPV using high-throughput sequencing technique

(2015) Yuejun Fu et al.   BIOTECHNOLOGY AND BIOPROCESS ENGINEERING

Microbial biogeography of the transnational fermented milk matsoni

(2015) Nicholas A. Bokulich et al.   FOOD MICROBIOLOGY

Bacterial diversity in typical Italian salami at different ripening stages as revealed by high-throughput sequencing of 16S rRNA amplicons

(2015) Justyna Połka et al.   FOOD MICROBIOLOGY

Identification of key micro-organisms involved in Douchi fermentation by statistical analysis and their use in an experimental fermentation

(2015) C. Chen et al.   JOURNAL OF APPLIED MICROBIOLOGY

The genus Weissella: taxonomy, ecology and biotechnological potential

(2015) Vincenzina Fusco et al.   Frontiers in Microbiology

Investigation of bacterial and fungal diversity in tarag using high-throughput sequencing

(2014) Zhihong Sun et al.   JOURNAL OF DAIRY SCIENCE

A Fine-Scale Phylogenetic Analysis of Free-Living Burkholderia Species in Sugarcane Field Soil

(2014) Kanako Tago et al.   MICROBES AND ENVIRONMENTS

Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences

(2013) Morgan G I Langille et al.   NATURE BIOTECHNOLOGY

Diversity of Microbial Communities in Production and Injection Waters of Algerian Oilfields Revealed by 16S rRNA Gene Amplicon 454 Pyrosequencing

(2013) Nesrine Lenchi et al.   PLoS One

Next-generation sequencing and its potential impact on food microbial genomics

(2012) Lisa Solieri et al.   ANNALS OF MICROBIOLOGY

Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms

(2012) J Gregory Caporaso et al.   ISME Journal

Application of denaturing gradient gel electrophoresis to microbial diversity analysis in Chinese Douchi

(2012) Tingtao Chen et al.   JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE

Microbial interactions: from networks to models

(2012) Karoline Faust et al.   NATURE REVIEWS MICROBIOLOGY

Using Candida oleophila as a biocontriol agens to prevent foodborne Escherichia coli O157 EHEC infections

(2012) Yujian Wang et al.   SpringerPlus

Compositions of microbial communities associated with oil and water in a mesothermic oil field

(2011) Yuriy Kryachko et al.   ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Molecular identification of microbial community in Chinese douchi during post-fermentation process

(2011) Tingtao Chen et al.   FOOD SCIENCE AND BIOTECHNOLOGY

Investigation of the microbial changes during koji-making process of Douchi by culture-dependent techniques and PCR-DGGE

(2011) Tingtao Chen et al.   INTERNATIONAL JOURNAL OF FOOD SCIENCE AND TECHNOLOGY

Defining seasonal marine microbial community dynamics

(2011) Jack A Gilbert et al.   ISME Journal

Using network analysis to explore co-occurrence patterns in soil microbial communities

(2011) Albert Barberán et al.   ISME Journal

Enterotypes of the human gut microbiome

(2011) Manimozhiyan Arumugam et al.   NATURE

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

The UNITE database for molecular identification of fungi - recent updates and future perspectives

(2010) Kessy Abarenkov et al.   NEW PHYTOLOGIST

The large-scale organization of the bacterial network of ecological co-occurrence interactions

(2010) Shiri Freilich et al.   NUCLEIC ACIDS RESEARCH

Functional Molecular Ecological Networks

(2010) J. Zhou et al.   mBio

Candidainfection and colonization among trauma patients

(2010) Dimitra Manolakaki et al.   Virulence

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

What is microbial community ecology?

(2009) Allan Konopka   ISME Journal