Eighty years of maize breeding alters plant nitrogen acquisition but not rhizosphere bacterial community composition

Linking rhizosphere microbiome composition of wild and domesticated Phaseolus vulgaris to genotypic and root phenotypic traits

(2017) Juan E Pérez-Jaramillo et al.   ISME Journal

Plant Phylogeny and Life History Shape Rhizosphere Bacterial Microbiome of Summer Annuals in an Agricultural Field

(2017) Bryan D. Emmett et al.   Frontiers in Microbiology

A Small Number of Low-abundance Bacteria Dominate Plant Species-specific Responses during Rhizosphere Colonization

(2017) Wayne Dawson et al.   Frontiers in Microbiology

Community Structure, Species Variation, and Potential Functions of Rhizosphere-Associated Bacteria of Different Winter Wheat (Triticum aestivum) Cultivars

(2017) Aaron K. Mahoney et al.   Frontiers in Plant Science

Corn Era Hybrid Response to Nitrogen Fertilization

(2016) Krishna P. Woli et al.   AGRONOMY JOURNAL

Climate and edaphic controllers influence rhizosphere community assembly for a wild annual grass

(2016) Erin E. Nuccio et al.   ECOLOGY

Dynamics of microbial community composition and soil organic carbon mineralization in soil following addition of pyrogenic and fresh organic matter

(2016) Thea Whitman et al.   ISME Journal

Least-Squares Means: TheRPackagelsmeans

(2016) Russell V. Lenth   Journal of Statistical Software

Plant domestication and the assembly of bacterial and fungal communities associated with strains of the common sunflower, Helianthus annuus

(2016) Jonathan W. Leff et al.   NEW PHYTOLOGIST

Unearthing the Ecology of Soil Microorganisms Using a High Resolution DNA-SIP Approach to Explore Cellulose and Xylose Metabolism in Soil

(2016) Charles Pepe-Ranney et al.   Frontiers in Microbiology

Using Ancient Traits to Convert Soil Health into Crop Yield: Impact of Selection on Maize Root and Rhizosphere Function

(2016) Jennifer E. Schmidt et al.   Frontiers in Plant Science

Whole genome analysis of halotolerant and alkalotolerant plant growth-promoting rhizobacterium Klebsiella sp. D5A

(2016) Wuxing Liu et al.   Scientific Reports

Evolution of US maize (Zea mays L.) root architectural and anatomical phenes over the past 100 years corresponds to increased tolerance of nitrogen stress

(2015) L. M. York et al.   JOURNAL OF EXPERIMENTAL BOTANY

Fitting Linear Mixed-Effects Models Usinglme4

(2015) Douglas Bates et al.   Journal of Statistical Software

Impact of plant domestication on rhizosphere microbiome assembly and functions

(2015) Juan E. Pérez-Jaramillo et al.   PLANT MOLECULAR BIOLOGY

Structure, variation, and assembly of the root-associated microbiomes of rice

(2015) Joseph Edwards et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Comparison of root system architecture and rhizosphere microbial communities of Balsas teosinte and domesticated corn cultivars

(2015) Márton Szoboszlay et al.   SOIL BIOLOGY & BIOCHEMISTRY

The Optimal Lateral Root Branching Density for Maize Depends on Nitrogen and Phosphorus Availability

(2014) J. A. Postma et al.   PLANT PHYSIOLOGY

Functional Potential of Soil Microbial Communities in the Maize Rhizosphere

(2014) Xiangzhen Li et al.   PLoS One

Rhizosphere priming effects on soil carbon and nitrogen mineralization

(2014) Biao Zhu et al.   SOIL BIOLOGY & BIOCHEMISTRY

Steep, cheap and deep: an ideotype to optimize water and N acquisition by maize root systems

(2013) Jonathan P. Lynch   ANNALS OF BOTANY

Development of a Dual-Index Sequencing Strategy and Curation Pipeline for Analyzing Amplicon Sequence Data on the MiSeq Illumina Sequencing Platform

(2013) James J. Kozich et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Changes in Nitrogen Use Traits Associated with Genetic Improvement for Grain Yield of Maize Hybrids Released in Different Decades

(2013) Jason W. Haegele et al.   CROP SCIENCE

Comparative metatranscriptomics reveals kingdom level changes in the rhizosphere microbiome of plants

(2013) Thomas R Turner et al.   ISME Journal

Agricultural Management and Labile Carbon Additions Affect Soil Microbial Community Structure and Interact with Carbon and Nitrogen Cycling

(2013) Sean T. Berthrong et al.   MICROBIAL ECOLOGY

Going back to the roots: the microbial ecology of the rhizosphere

(2013) Laurent Philippot et al.   NATURE REVIEWS MICROBIOLOGY

Competition between roots and microorganisms for nitrogen: mechanisms and ecological relevance

(2013) Yakov Kuzyakov et al.   NEW PHYTOLOGIST

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

(2013) Paul J. McMurdie et al.   PLoS One

Diversity and heritability of the maize rhizosphere microbiome under field conditions

(2013) J. A. Peiffer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Rhizosphere priming: a nutrient perspective

(2013) Feike A. Dijkstra et al.   Frontiers in Microbiology

Physiological perspectives of changes over time in maize yield dependency on nitrogen uptake and associated nitrogen efficiencies: A review

(2012) Ignacio A. Ciampitti et al.   FIELD CROPS RESEARCH

Mycorrhizal responsiveness trends in annual crop plants and their wild relatives—a meta-analysis on studies from 1981 to 2010

(2012) Anika Lehmann et al.   PLANT AND SOIL

Nitrogen and water resources commonly limit crop yield increases, not necessarily plant genetics

(2012) Thomas R. Sinclair et al.   Global Food Security-Agriculture Policy Economics and Environment

Is diversification history of maize influencing selection of soil bacteria by roots?

(2011) MARIE-LARA BOUFFAUD et al.   MOLECULAR ECOLOGY

Plant regulation of microbial enzyme production in situ

(2011) Colin Averill et al.   SOIL BIOLOGY & BIOCHEMISTRY

Optimization of hydrolytic and oxidative enzyme methods for ecosystem studies

(2011) Donovan P. German et al.   SOIL BIOLOGY & BIOCHEMISTRY

Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample

(2010) J. G. Caporaso et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Plant genotype strongly modifies the structure and growth of maize rhizosphere microbial communities

(2010) Manuel Aira et al.   SOIL BIOLOGY & BIOCHEMISTRY

Metabolic analysis of the soil microbe Dechloromonas aromatica str. RCB: indications of a surprisingly complex life-style and cryptic anaerobic pathways for aromatic degradation

(2009) Kennan Salinero et al.   BMC GENOMICS

The fate of nitrogen in grain cropping systems: a meta-analysis of15N field experiments

(2009) Jennifer B. Gardner et al.   ECOLOGICAL APPLICATIONS

How does arbuscular mycorrhizal colonization vary with host plant genotype? An example based on maize (Zea mays) germplasms

(2009) G.-H. An et al.   PLANT AND SOIL

Nutrient Imbalances in Agricultural Development

(2009) P. M. Vitousek et al.   SCIENCE

Sanctions, Cooperation, and the Stability of Plant-Rhizosphere Mutualisms

(2008) E. Toby Kiers et al.   Annual Review of Ecology Evolution and Systematics

Biological nitrogen fixation in maize (Zea mays L.) by 15N isotope-dilution and identification of associated culturable diazotrophs

(2008) Adriana Montañez et al.   BIOLOGY AND FERTILITY OF SOILS

Characterizing nitrogen use efficiency in natural and agricultural ecosystems to improve the performance of cereal crops in low-input and organic agricultural systems

(2008) Julie C. Dawson et al.   FIELD CROPS RESEARCH

Selective progressive response of soil microbial community to wild oat roots

(2008) Kristen M DeAngelis et al.   ISME Journal

Novel approaches in plant breeding for rhizosphere-related traits

(2008) Matthias Wissuwa et al.   PLANT AND SOIL