Climate and edaphic controllers influence rhizosphere community assembly for a wild annual grass

Structure and Function of the Bacterial Root Microbiota in Wild and Domesticated Barley

(2015) Davide Bulgarelli et al.   Cell Host & Microbe

Structure, variation, and assembly of the root-associated microbiomes of rice

(2015) Joseph Edwards et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Root surface as a frontier for plant microbiome research: Fig. 1.

(2015) Marcel G. A. van der Heijden et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Successional Trajectories of Rhizosphere Bacterial Communities over Consecutive Seasons

(2015) Shengjing Shi et al.   mBio

Selection on soil microbiomes reveals reproducible impacts on plant function

(2014) Kevin Panke-Buisse et al.   ISME Journal

Soil biodiversity and soil community composition determine ecosystem multifunctionality

(2014) C. Wagg et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Assembly of root-associated bacteria communities: interactions between abiotic and biotic factors

(2014) Sarah L Dean et al.   Environmental Microbiology Reports

Quantitative imaging of rhizosphere pH and CO2 dynamics with planar optodes

(2013) Stephan Blossfeld et al.   ANNALS OF BOTANY

Structure and Functions of the Bacterial Microbiota of Plants

(2013) Davide Bulgarelli et al.   Annual Review of Plant Biology

An arbuscular mycorrhizal fungus significantly modifies the soil bacterial community and nitrogen cycling during litter decomposition

(2013) Erin E. Nuccio et al.   ENVIRONMENTAL MICROBIOLOGY

Quantifying community assembly processes and identifying features that impose them

(2013) James C Stegen et al.   ISME Journal

Phylogenetic beta diversity in bacterial assemblages across ecosystems: deterministic versus stochastic processes

(2013) Jianjun Wang et al.   ISME Journal

Responses of soil bacterial and fungal communities to extreme desiccation and rewetting

(2013) Romain L Barnard et al.   ISME Journal

Patterns and Processes of Microbial Community Assembly

(2013) D. R. Nemergut et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Going back to the roots: the microbial ecology of the rhizosphere

(2013) Laurent Philippot et al.   NATURE REVIEWS MICROBIOLOGY

Diversity and heritability of the maize rhizosphere microbiome under field conditions

(2013) J. A. Peiffer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Quantitative divergence of the bacterial root microbiota in Arabidopsis thaliana relatives

(2013) K. Schlaeppi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Plant growth-promoting rhizobacteria and root system functioning

(2013) Jordan Vacheron et al.   Frontiers in Plant Science

Electing a candidate: a speculative history of the bacterial phylum OP10

(2012) Peter F. Dunfield et al.   ENVIRONMENTAL MICROBIOLOGY

Finer resolution observation and monitoring of global land cover: first mapping results with Landsat TM and ETM+ data

(2012) Peng Gong et al.   INTERNATIONAL JOURNAL OF REMOTE SENSING

Stochastic and deterministic assembly processes in subsurface microbial communities

(2012) James C Stegen et al.   ISME Journal

Defining the core Arabidopsis thaliana root microbiome

(2012) Derek S. Lundberg et al.   NATURE

Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota

(2012) Davide Bulgarelli et al.   NATURE

Impact of root exudates and plant defense signaling on bacterial communities in the rhizosphere. A review

(2011) Rogier F. Doornbos et al.   Agronomy for Sustainable Development

Verrucomicrobia subdivision 1 strains display a difference in the colonization of the leek (Allium porrum) rhizosphere

(2011) Ulisses Nunes da Rocha et al.   FEMS MICROBIOLOGY ECOLOGY

Phylogenetic community structure and phylogenetic turnover across space and edaphic gradients in western Amazonian tree communities

(2010) Paul V. A. Fine et al.   ECOGRAPHY

Are root exudates more important than other sources of rhizodeposits in structuring rhizosphere bacterial communities?

(2010) Paul G. Dennis et al.   FEMS MICROBIOLOGY ECOLOGY

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments

(2010) Morgan N. Price et al.   PLoS One

Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample

(2010) J. G. Caporaso et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Conceptual Synthesis in Community Ecology

(2010) Mark Vellend   QUARTERLY REVIEW OF BIOLOGY

In Situ Phylogenetic Structure and Diversity of Wild Bradyrhizobium Communities

(2009) J. L. Sachs et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Plant species and soil type cooperatively shape the structure and function of microbial communities in the rhizosphere

(2009) Gabriele Berg et al.   FEMS MICROBIOLOGY ECOLOGY

Despite strong seasonal responses, soil microbial consortia are more resilient to long-term changes in rainfall than overlying grassland

(2009) Karelyn Cruz-Martínez et al.   ISME Journal

Testing for local adaptation inAvena barbata: a classic example of ecotypic divergence

(2009) ROBERT G. LATTA   MOLECULAR ECOLOGY

Bacterial quorum sensing and nitrogen cycling in rhizosphere soil

(2008) Kristen M. DeAngelis et al.   FEMS MICROBIOLOGY ECOLOGY

Selective progressive response of soil microbial community to wild oat roots

(2008) Kristen M DeAngelis et al.   ISME Journal

Plant host habitat and root exudates shape soil bacterial community structure

(2008) Feth el Zahar Haichar et al.   ISME Journal

Distantly sampled soils carry few species in common

(2008) Roberta R Fulthorpe et al.   ISME Journal

Emerging patterns in the comparative analysis of phylogenetic community structure

(2008) S. M. VAMOSI et al.   MOLECULAR ECOLOGY

Rapid shifts in plant distribution with recent climate change

(2008) A. E. Kelly et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Rhizosphere priming effect: Its functional relationships with microbial turnover, evapotranspiration, and C–N budgets

(2008) Weixin Cheng   SOIL BIOLOGY & BIOCHEMISTRY