Impact of plant domestication on rhizosphere microbiome assembly and functions

Crop Domestication and Its Impact on Naturally Selected Trophic Interactions

(2015) Yolanda H. Chen et al.   Annual Review of Entomology

Glomeromycota associated with Mexican native maize landraces in Los Tuxtlas, Mexico

(2015) Wendy Sangabriel-Conde et al.   APPLIED SOIL ECOLOGY

Structure and Function of the Bacterial Root Microbiota in Wild and Domesticated Barley

(2015) Davide Bulgarelli et al.   Cell Host & Microbe

Long-term nitrogen addition causes the evolution of less-cooperative mutualists

(2015) Dylan J. Weese et al.   EVOLUTION

Comparison of root system architecture and rhizosphere microbial communities of Balsas teosinte and domesticated corn cultivars

(2015) Márton Szoboszlay et al.   SOIL BIOLOGY & BIOCHEMISTRY

Wild barley introgression lines revealed novel QTL alleles for root and related shoot traits in the cultivated barley (Hordeum vulgareL.)

(2014) Ali Ahmad Naz et al.   BMC GENETICS

Pyrosequencing assessment of rhizosphere fungal communities from a soybean field

(2014) Akifumi Sugiyama et al.   CANADIAN JOURNAL OF MICROBIOLOGY

Root microbiome relates to plant host evolution in maize and other Poaceae

(2014) Marie-Lara Bouffaud et al.   ENVIRONMENTAL MICROBIOLOGY

Plant age and genotype affect the bacterial community composition in the tuber rhizosphere of field-grown sweet potato plants

(2014) Joana M. Marques et al.   FEMS MICROBIOLOGY ECOLOGY

Phylogenetic diversity of Mesorhizobium in chickpea

(2014) Dong Hyun Kim et al.   JOURNAL OF BIOSCIENCES

Functional Soil Microbiome: Belowground Solutions to an Aboveground Problem

(2014) V. Lakshmanan et al.   PLANT PHYSIOLOGY

Changes in the Bacterial Community of Soybean Rhizospheres during Growth in the Field

(2014) Akifumi Sugiyama et al.   PLoS One

Root exudates mediated interactions belowground

(2014) Feth el Zahar Haichar et al.   SOIL BIOLOGY & BIOCHEMISTRY

Differences between the rhizosphere microbiome of Beta vulgaris ssp. maritima—ancestor of all beet crops—and modern sugar beets

(2014) Christin Zachow et al.   Frontiers in Microbiology

Amino acids in the rhizosphere: From plants to microbes

(2013) Luke A. Moe   AMERICAN JOURNAL OF BOTANY

Structure and Functions of the Bacterial Microbiota of Plants

(2013) Davide Bulgarelli et al.   Annual Review of Plant Biology

Native maize landraces from Los Tuxtlas, Mexico show varying mycorrhizal dependency for P uptake

(2013) Wendy Sangabriel-Conde et al.   BIOLOGY AND FERTILITY OF SOILS

Host signature effect on plant root-associated microbiomes revealed through analyses of residentvs. active communities

(2013) Maya Ofek et al.   ENVIRONMENTAL MICROBIOLOGY

Comparative metatranscriptomics reveals kingdom level changes in the rhizosphere microbiome of plants

(2013) Thomas R Turner et al.   ISME Journal

Rhizosphere microbiome assemblage is affected by plant development

(2013) Jacqueline M Chaparro et al.   ISME Journal

Application of Natural Blends of Phytochemicals Derived from the Root Exudates ofArabidopsisto the Soil Reveal That Phenolic-related Compounds Predominantly Modulate the Soil Microbiome

(2013) Dayakar V. Badri et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Flavonoids: Their Structure, Biosynthesis and Role in the Rhizosphere, Including Allelopathy

(2013) Leslie A. Weston et al.   JOURNAL OF CHEMICAL ECOLOGY

Side-effects of plant domestication: ecosystem impacts of changes in litter quality

(2013) Pablo García-Palacios et al.   NEW PHYTOLOGIST

Effects of different plant root exudates and their organic acid components on chemotaxis, biofilm formation and colonization by beneficial rhizosphere-associated bacterial strains

(2013) Nan Zhang et al.   PLANT AND SOIL

Introgression of Novel Traits from a Wild Wheat Relative Improves Drought Adaptation in Wheat

(2013) D. F. Placido et al.   PLANT PHYSIOLOGY

Diversity and heritability of the maize rhizosphere microbiome under field conditions

(2013) J. A. Peiffer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Reconstructing the Microbial Diversity and Function of Pre-Agricultural Tallgrass Prairie Soils in the United States

(2013) N. Fierer et al.   SCIENCE

Root exudates: the hidden part of plant defense

(2013) Ulrike Baetz et al.   TRENDS IN PLANT SCIENCE

Identification of QTLs conferring resistance to downy mildew in legacy cultivars of lettuce

(2013) Ivan Simko et al.   Scientific Reports

A Common Signaling Process that Promotes Mycorrhizal and Oomycete Colonization of Plants

(2012) Ertao Wang et al.   CURRENT BIOLOGY

Consistent effects of nitrogen amendments on soil microbial communities and processes across biomes

(2012) Kelly S. Ramirez et al.   GLOBAL CHANGE BIOLOGY

Molecular analysis of the parallel domestication of the common bean (Phaseolus vulgaris) in Mesoamerica and the Andes

(2012) Elena Bitocchi et al.   NEW PHYTOLOGIST

Mycorrhizal responsiveness trends in annual crop plants and their wild relatives—a meta-analysis on studies from 1981 to 2010

(2012) Anika Lehmann et al.   PLANT AND SOIL

Harnessing the rhizosphere microbiome through plant breeding and agricultural management

(2012) Matthew G. Bakker et al.   PLANT AND SOIL

Microbe-Associated Molecular Patterns-Triggered Root Responses Mediate Beneficial Rhizobacterial Recruitment in Arabidopsis

(2012) V. Lakshmanan et al.   PLANT PHYSIOLOGY

Benzoxazinoids in Root Exudates of Maize Attract Pseudomonas putida to the Rhizosphere

(2012) Andrew L. Neal et al.   PLoS One

Conversion of the Amazon rainforest to agriculture results in biotic homogenization of soil bacterial communities

(2012) J. L. M. Rodrigues et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Mesoamerican origin of the common bean (Phaseolus vulgaris L.) is revealed by sequence data

(2012) E. Bitocchi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The rhizosphere microbiome and plant health

(2012) Roeland L. Berendsen et al.   TRENDS IN PLANT SCIENCE

Plant- and Microbe-Derived Compounds Affect the Expression of Genes Encoding Antifungal Compounds in a Pseudomonad with Biocontrol Activity

(2011) Patrice de Werra et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Identification and role of organic acids in watermelon root exudates for recruiting Paenibacillus polymyxa SQR-21 in the rhizosphere

(2011) Ning Ling et al.   EUROPEAN JOURNAL OF SOIL BIOLOGY

Effects of selected root exudate components on soil bacterial communities

(2011) Shengjing Shi et al.   FEMS MICROBIOLOGY ECOLOGY

Comparative Analysis of Bacterial Communities in a Potato Field as Determined by Pyrosequencing

(2011) Özgül İnceoğlu et al.   PLoS One

Mutualism breakdown in breadfruit domestication

(2011) X. Xing et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Deciphering the Rhizosphere Microbiome for Disease-Suppressive Bacteria

(2011) R. Mendes et al.   SCIENCE

Genotypic diversity among rhizospheric bacteria of three legumes assessed by cultivation-dependent and cultivation-independent techniques

(2011) Neelawan Pongsilp et al.   WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY

Effects of Plant Genotype and Growth Stage on the Betaproteobacterial Communities Associated with Different Potato Cultivars in Two Fields

(2010) O. Inceoglu et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Not a peripheral issue: secretion in plant–microbe interactions

(2010) Paweł Bednarek et al.   CURRENT OPINION IN PLANT BIOLOGY

PhyloChip hybridization uncovered an enormous bacterial diversity in the rhizosphere of different potato cultivars: many common and few cultivar-dependent taxa

(2010) Nicole Weinert et al.   FEMS MICROBIOLOGY ECOLOGY

Plants Respond to Pathogen Infection by Enhancing the Antifungal Gene Expression of Root-Associated Bacteria

(2010) Alexandre Jousset et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Genetic perspectives on crop domestication

(2010) Briana L. Gross et al.   TRENDS IN PLANT SCIENCE

Rhizosphere chemical dialogues: plant–microbe interactions

(2009) Dayakar V Badri et al.   CURRENT OPINION IN BIOTECHNOLOGY

Influence of Arabidopsis thaliana accessions on rhizobacterial communities and natural variation in root exudates

(2009) Shirley A. Micallef et al.   JOURNAL OF EXPERIMENTAL BOTANY

The nature of selection during plant domestication

(2009) Michael D. Purugganan et al.   NATURE

Temporal and Spatial Dynamics of Bacterial Community in the Rhizosphere of Soybean Genotypes Grown in a Black Soil

(2009) Jian JIN et al.   PEDOSPHERE

Carbon flow in the rhizosphere: carbon trading at the soil–root interface

(2009) D. L. Jones et al.   PLANT AND SOIL

Regulation and function of root exudates

(2009) DAYAKAR V. BADRI et al.   PLANT CELL AND ENVIRONMENT

Drought and salt tolerances in wild relatives for wheat and barley improvement

(2009) EVIATAR NEVO et al.   PLANT CELL AND ENVIRONMENT

Sanctions, Cooperation, and the Stability of Plant-Rhizosphere Mutualisms

(2008) E. Toby Kiers et al.   Annual Review of Ecology Evolution and Systematics

Disentangling the rhizosphere effect on nitrate reducers and denitrifiers: insight into the role of root exudates

(2008) S. Henry et al.   ENVIRONMENTAL MICROBIOLOGY

Plant host habitat and root exudates shape soil bacterial community structure

(2008) Feth el Zahar Haichar et al.   ISME Journal

Novel approaches in plant breeding for rhizosphere-related traits

(2008) Matthias Wissuwa et al.   PLANT AND SOIL

A Maize (E)- -Caryophyllene Synthase Implicated in Indirect Defense Responses against Herbivores Is Not Expressed in Most American Maize Varieties

(2008) T. G. Kollner et al.   PLANT CELL

Root-Secreted Malic Acid Recruits Beneficial Soil Bacteria

(2008) T. Rudrappa et al.   PLANT PHYSIOLOGY

Bacterial communities in soybean rhizosphere in response to soil type, soybean genotype, and their growth stage

(2008) Yanxia Xu et al.   SOIL BIOLOGY & BIOCHEMISTRY

Selecting a set of wild barley introgression lines and verification of QTL effects for resistance to powdery mildew and leaf rust

(2008) Inga Schmalenbach et al.   THEORETICAL AND APPLIED GENETICS