Common garden experiments in the genomic era: new perspectives and opportunities

Heritability and quantitative genetic divergence of serotiny, a fire-persistence plant trait

(2014) Ana Hernández-Serrano et al.   ANNALS OF BOTANY

Marker-based estimates of relatedness and inbreeding coefficients: an assessment of current methods

(2014) J. Wang   JOURNAL OF EVOLUTIONARY BIOLOGY

Genome Scans for Detecting Footprints of Local Adaptation Using a Bayesian Factor Model

(2014) Nicolas Duforet-Frebourg et al.   MOLECULAR BIOLOGY AND EVOLUTION

Two are better than one: combining landscape genomics and common gardens for detecting local adaptation in forest trees

(2014) Olivier Lepais et al.   MOLECULAR ECOLOGY

Landscape genomics and a common garden trial reveal adaptive differentiation to temperature across Europe in the tree speciesAlnus glutinosa

(2014) Hanne De Kort et al.   MOLECULAR ECOLOGY

Evaluation of demographic history and neutral parameterization on the performance ofFSToutlier tests

(2014) Katie E. Lotterhos et al.   MOLECULAR ECOLOGY

Genome scan methods against more complex models: when and how much should we trust them?

(2014) Pierre de Villemereuil et al.   MOLECULAR ECOLOGY

Large-scale adaptive differentiation in the alpine perennial herbArabis alpina

(2014) Per Toräng et al.   NEW PHYTOLOGIST

Grand challenges in evolutionary and population genetics: the importance of integrating epigenetics, genomics, modeling, and experimentation

(2014) Samuel A. Cushman   Frontiers in Genetics

BRINGING HABITAT INFORMATION INTO STATISTICAL TESTS OF LOCAL ADAPTATION IN QUANTITATIVE TRAITS: A CASE STUDY OF NINE-SPINED STICKLEBACKS

(2013) M. Karhunen et al.   EVOLUTION

LANDSCAPE GENOMICS IN ATLANTIC SALMON (SALMO SALAR): SEARCHING FOR GENE-ENVIRONMENT INTERACTIONS DRIVING LOCAL ADAPTATION

(2013) Bourret Vincent et al.   EVOLUTION

Local adaptation to salinity in the three-spined stickleback?

(2013) J. DeFaveri et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Testing for Associations between Loci and Environmental Gradients Using Latent Factor Mixed Models

(2013) Eric Frichot et al.   MOLECULAR BIOLOGY AND EVOLUTION

Population genomic footprints of selection and associations with climate in natural populations ofArabidopsis hallerifrom the Alps

(2013) Martin C. Fischer et al.   MOLECULAR ECOLOGY

Investigation of the geographical scale of adaptive phenological variation and its underlying genetics in Arabidopsis thaliana

(2013) Benjamin Brachi et al.   MOLECULAR ECOLOGY

driftsel: an R package for detecting signals of natural selection in quantitative traits

(2013) M. Karhunen et al.   Molecular Ecology Resources

Ecological genomics of local adaptation

(2013) Outi Savolainen et al.   NATURE REVIEWS GENETICS

Genome-wide association studies and prediction of 17 traits related to phenology, biomass and cell wall composition in the energy grassMiscanthus sinensis

(2013) Gancho T. Slavov et al.   NEW PHYTOLOGIST

The advantages and limitations of trait analysis with GWAS: a review

(2013) Arthur Korte et al.   Plant Methods

Detecting correlation between allele frequencies and environmental variables as a signature of selection. A fast computational approach for genome-wide studies

(2013) Gilles Guillot et al.   Spatial Statistics

Biases in quantitative genetic analyses using open-pollinated progeny tests from natural tree populations

(2013) Julie Gauzere et al.   ACTA BOTANICA GALLICA

Estimating Population-Level Coancestry Coefficients by an Admixture F Model

(2012) M. Karhunen et al.   GENETICS

Computationally Efficient Sibship and Parentage Assignment from Multilocus Marker Data

(2012) J. Wang   GENETICS

Reciprocal transplants demonstrate strong adaptive differentiation of the model organism Arabidopsis thaliana in its native range

(2012) Jon Ågren et al.   NEW PHYTOLOGIST

A New Method to Uncover Signatures of Divergent and Stabilizing Selection in Quantitative Traits

(2011) Otso Ovaskainen et al.   GENETICS

Adaptive responses for seed and leaf phenology in natural populations of sessile oak along an altitudinal gradient

(2011) F. ALBERTO et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Natural selection drives clinal life history patterns in the perennial sunflower species, Helianthus maximiliani

(2011) TAKESHI KAWAKAMI et al.   MOLECULAR ECOLOGY

Comparisons between QST and FST-how wrong have we been?

(2011) PIM EDELAAR et al.   MOLECULAR ECOLOGY

A Robust, Simple Genotyping-by-Sequencing (GBS) Approach for High Diversity Species

(2011) Robert J. Elshire et al.   PLoS One

Detecting Selection in Population Trees: The Lewontin and Krakauer Test Extended

(2010) Maxime Bonhomme et al.   GENETICS

Using Environmental Correlations to Identify Loci Underlying Local Adaptation

(2010) G. Coop et al.   GENETICS

Back to nature: ecological genomics of loblolly pine (Pinus taeda, Pinaceae)

(2010) ANDREW J. ECKERT et al.   MOLECULAR ECOLOGY

Quantifying population structure using the F-model

(2010) OSCAR E. GAGGIOTTI et al.   Molecular Ecology Resources

Local adaptation in Trinidadian guppies alters ecosystem processes

(2010) Ronald D. Bassar et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Basal metabolism is correlated with habitat productivity among populations of degus (Octodon degus)

(2009) Francisco Bozinovic et al.   COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY A-MOLECULAR & INTEGRATIVE PHYSIOLOGY

An ecologist’s guide to the animal model

(2009) Alastair J. Wilson et al.   JOURNAL OF ANIMAL ECOLOGY

A practical guide to methods of parentage analysis

(2009) ADAM G. JONES et al.   Molecular Ecology Resources

COLONY: a program for parentage and sibship inference from multilocus genotype data

(2009) OWEN R. JONES et al.   Molecular Ecology Resources

Land ahead: using genome scans to identify molecular markers of adaptive relevance

(2009) Rolf Holderegger et al.   Plant Ecology & Diversity

A simple method for distinguishing within- versus between-subject effects using mixed models

(2008) Martijn van de Pol et al.   ANIMAL BEHAVIOUR

A Genome-Scan Method to Identify Selected Loci Appropriate for Both Dominant and Codominant Markers: A Bayesian Perspective

(2008) M. Foll et al.   GENETICS

Rapid SNP Discovery and Genetic Mapping Using Sequenced RAD Markers

(2008) Nathan A. Baird et al.   PLoS One