Genome Scans for Detecting Footprints of Local Adaptation Using a Bayesian Factor Model
Published 2014 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Genome Scans for Detecting Footprints of Local Adaptation Using a Bayesian Factor Model
Authors
Keywords
-
Journal
MOLECULAR BIOLOGY AND EVOLUTION
Volume 31, Issue 9, Pages 2483-2495
Publisher
Oxford University Press (OUP)
Online
2014-06-05
DOI
10.1093/molbev/msu182
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Modeling Recent Human Evolution in Mice by Expression of a Selected EDAR Variant
- (2013) Yana G. Kamberov et al. CELL
- Population structure, migration and diversifying selection in the Netherlands
- (2013) Abdel Abdellaoui et al. EUROPEAN JOURNAL OF HUMAN GENETICS
- Detecting and Measuring Selection from Gene Frequency Data
- (2013) R. Vitalis et al. GENETICS
- Detecting Signatures of Selection Through Haplotype Differentiation Among Hierarchically Structured Populations
- (2013) M. I. Fariello et al. GENETICS
- Robust Identification of Local Adaptation from Allele Frequencies
- (2013) T. Gunther et al. GENETICS
- Testing for Associations between Loci and Environmental Gradients Using Latent Factor Mixed Models
- (2013) Eric Frichot et al. MOLECULAR BIOLOGY AND EVOLUTION
- Is local selection so widespread in river organisms? Fractal geometry of river networks leads to high bias in outlier detection
- (2013) Yoan Fourcade et al. MOLECULAR ECOLOGY
- The NHGRI GWAS Catalog, a curated resource of SNP-trait associations
- (2013) Danielle Welter et al. NUCLEIC ACIDS RESEARCH
- Ten years of landscape genetics
- (2013) Stéphanie Manel et al. TRENDS IN ECOLOGY & EVOLUTION
- Molecular Phylogeography of a Human Autosomal Skin Color Locus Under Natural Selection
- (2013) Victor A. Canfield et al. G3-Genes Genomes Genetics
- The Light Skin Allele of SLC24A5 in South Asians and Europeans Shares Identity by Descent
- (2013) Chandana Basu Mallick et al. PLoS Genetics
- Next-Generation Statistical Genetics: Modeling, Penalization, and Optimization in High-Dimensional Data
- (2013) Kenneth Lange et al. Annual Review of Statistics and Its Application
- Gowinda: unbiased analysis of gene set enrichment for genome-wide association studies
- (2012) R. Kofler et al. BIOINFORMATICS
- RP1L1Variants are Associated with a Spectrum of Inherited Retinal Diseases Including Retinitis Pigmentosa and Occult Macular Dystrophy
- (2012) Alice E. Davidson et al. HUMAN MUTATION
- Patterns of Ancestry, Signatures of Natural Selection, and Genetic Association with Stature in Western African Pygmies
- (2012) Joseph P. Jarvis et al. PLoS Genetics
- Bayesian variable selection regression for genome-wide association studies and other large-scale problems
- (2011) Yongtao Guan et al. Annals of Applied Statistics
- A Hierarchical Bayesian Model for Next-Generation Population Genomics
- (2011) Z. Gompert et al. GENETICS
- Enhanced expression of retinoic acid-metabolizing enzyme CYP26A1 in sunlight-damaged human skin
- (2011) Makoto Osanai et al. Medical Molecular Morphology
- ALFRED: an allele frequency resource for research and teaching
- (2011) H. Rajeevan et al. NUCLEIC ACIDS RESEARCH
- Signatures of Environmental Genetic Adaptation Pinpoint Pathogens as the Main Selective Pressure through Human Evolution
- (2011) Matteo Fumagalli et al. PLoS Genetics
- Detecting Selection in Population Trees: The Lewontin and Krakauer Test Extended
- (2010) Maxime Bonhomme et al. GENETICS
- Likelihood-Free Inference of Population Structure and Local Adaptation in a Bayesian Hierarchical Model
- (2010) E. Bazin et al. GENETICS
- A Genome-Wide Search for Signals of High-Altitude Adaptation in Tibetans
- (2010) S. Xu et al. MOLECULAR BIOLOGY AND EVOLUTION
- Assessing population structure: FST and related measures
- (2010) PATRICK G. MEIRMANS et al. Molecular Ecology Resources
- Human adaptations to diet, subsistence, and ecoregion are due to subtle shifts in allele frequency
- (2010) A. M. Hancock et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Sequencing of 50 Human Exomes Reveals Adaptation to High Altitude
- (2010) X. Yi et al. SCIENCE
- Analysis of Population Structure: A Unifying Framework and Novel Methods Based on Sparse Factor Analysis
- (2010) Barbara E. Engelhardt et al. PLoS Genetics
- Identifiability of parameters in latent structure models with many observed variables
- (2009) Elizabeth S. Allman et al. ANNALS OF STATISTICS
- Signals of recent positive selection in a worldwide sample of human populations
- (2009) J. K. Pickrell et al. GENOME RESEARCH
- High-Dimensional Sparse Factor Modeling: Applications in Gene Expression Genomics
- (2009) Carlos M. Carvalho et al. JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION
- A Bayesian Hierarchical Model for Analysis of Single-Nucleotide Polymorphisms Diversity in Multilocus, Multipopulation Samples
- (2009) Feng Guo et al. JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION
- Genome-wide scans for footprints of natural selection
- (2009) T. K. Oleksyk et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Pervasive Natural Selection in the Drosophila Genome?
- (2009) Guy Sella et al. PLoS Genetics
- LOSITAN: A workbench to detect molecular adaptation based on a Fst-outlier method
- (2008) Tiago Antao et al. BMC BIOINFORMATICS
- HETEROGENEOUS GENOMIC DIFFERENTIATION BETWEEN WALKING-STICK ECOTYPES: "ISOLATION BY ADAPTATION" AND MULTIPLE ROLES FOR DIVERGENT SELECTION
- (2008) Patrik Nosil et al. EVOLUTION
- Bayesian Variable Selection for Detecting Adaptive Genomic Differences Among Populations
- (2008) A. Riebler et al. GENETICS
- A Genome-Scan Method to Identify Selected Loci Appropriate for Both Dominant and Codominant Markers: A Bayesian Perspective
- (2008) M. Foll et al. GENETICS
- Natural selection has driven population differentiation in modern humans
- (2008) Luis B Barreiro et al. NATURE GENETICS
- Interpreting principal component analyses of spatial population genetic variation
- (2008) John Novembre et al. NATURE GENETICS
- Worldwide Human Relationships Inferred from Genome-Wide Patterns of Variation
- (2008) J. Z. Li et al. SCIENCE
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started