Extreme environments and the origins of biodiversity: Adaptation and speciation in sulphide spring fishes

Molecular evolution and expression of oxygen transport genes in livebearing fishes (Poeciliidae) from hydrogen sulfide rich springs

(2018) Nicholas Barts et al.   GENOME

Genome-scale data reveal that endemic Poecilia populations from small sulphidic springs display no evidence of inbreeding

(2017) Anthony P. Brown et al.   MOLECULAR ECOLOGY

Complexities of gene expression patterns in natural populations of an extremophile fish (Poecilia mexicana , Poeciliidae)

(2017) Courtney N. Passow et al.   MOLECULAR ECOLOGY

The roles of plasticity and evolutionary change in shaping gene expression variation in natural populations of extremophile fish

(2017) Courtney N. Passow et al.   MOLECULAR ECOLOGY

The origin and biogeographic diversification of fishes in the family Poeciliidae

(2017) David N. Reznick et al.   PLoS One

Convergent evolution of reduced energy demands in extremophile fish

(2017) Courtney N. Passow et al.   PLoS One

MicroRNAs as Important Regulators of Exercise Adaptation

(2017) Gustavo J.J. Silva et al.   PROGRESS IN CARDIOVASCULAR DISEASES

Trait Correlations in the Genomics Era

(2017) Julia B. Saltz et al.   TRENDS IN ECOLOGY & EVOLUTION

Intrasexual competition enhances reproductive isolation between locally adapted populations

(2017) David Bierbach et al.   Current Zoology

Integrative Approaches for Studying Mitochondrial and Nuclear Genome Co-evolution in Oxidative Phosphorylation

(2017) Paul Sunnucks et al.   Frontiers in Genetics

Contrasting effects of environment and genetics generate a continuum of parallel evolution

(2017) Yoel E. Stuart et al.   Nature Ecology & Evolution

Sex-specific evolution during the diversification of live-bearing fishes

(2017) Zachary W. Culumber et al.   Nature Ecology & Evolution

The Genome of the Trinidadian Guppy, Poecilia reticulata, and Variation in the Guanapo Population

(2017) Axel Künstner et al.   PLoS One

The Evolutionary Ecology of Animals Inhabiting Hydrogen Sulfide–Rich Environments

(2016) Michael Tobler et al.   Annual Review of Ecology Evolution and Systematics

Multiple Stressors in a Changing World: The Need for an Improved Perspective on Physiological Responses to the Dynamic Marine Environment

(2016) Alex R. Gunderson et al.   Annual Review of Marine Science

Habitat use by two extremophile, highly endemic, and critically endangered fish species (Gambusia eurystomaandPoecilia sulphuraria; Poeciliidae)

(2016) Zachary W. Culumber et al.   AQUATIC CONSERVATION-MARINE AND FRESHWATER ECOSYSTEMS

Extremophile Poeciliidae: multivariate insights into the complexity of speciation along replicated ecological gradients

(2016) Rüdiger Riesch et al.   BMC EVOLUTIONARY BIOLOGY

Does personality affect premating isolation between locally-adapted populations?

(2016) Carolin Sommer-Trembo et al.   BMC EVOLUTIONARY BIOLOGY

The predictability and magnitude of life-history divergence to ecological agents of selection: a meta-analysis in livebearing fishes

(2016) Michael P. Moore et al.   ECOLOGY LETTERS

Adaptive, but not condition-dependent, body shape differences contribute to assortative mating preferences during ecological speciation

(2016) Ryan Greenway et al.   EVOLUTION

Toxic hydrogen sulphide shapes brain anatomy: a comparative study of sulphide-adapted ecotypes in thePoecilia mexicanacomplex

(2016) T. Schulz-Mirbach et al.   JOURNAL OF ZOOLOGY

Mechanisms Underlying Adaptation to Life in Hydrogen Sulfide–Rich Environments

(2016) Joanna L. Kelley et al.   MOLECULAR BIOLOGY AND EVOLUTION

Phylogenetic analyses of the subgenus Mollienesia ( Poecilia , Poeciliidae, Teleostei) reveal taxonomic inconsistencies, cryptic biodiversity, and spatio-temporal aspects of diversification in Middle America

(2016) Maura Palacios et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

The seahorse genome and the evolution of its specialized morphology

(2016) Qiang Lin et al.   NATURE

Alternative splicing and the evolution of phenotypic novelty

(2016) Stephen J. Bush et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

The Role of Hydrogen Sulfide in Evolution and the Evolution of Hydrogen Sulfide in Metabolism and Signaling

(2016) Kenneth R. Olson et al.   PHYSIOLOGY

Hypoxia and metabolic adaptation of cancer cells

(2016) K L Eales et al.   Oncogenesis

Convergent changes in the trophic ecology of extremophile fish along replicated environmental gradients

(2015) Michael Tobler et al.   FRESHWATER BIOLOGY

Unique evolutionary trajectories in repeated adaptation to hydrogen sulphide-toxic habitats of a neotropical fish (Poecilia mexicana)

(2015) Markus Pfenninger et al.   MOLECULAR ECOLOGY

Hydrogen sulfide-based therapeutics: exploiting a unique but ubiquitous gasotransmitter

(2015) John L. Wallace et al.   NATURE REVIEWS DRUG DISCOVERY

Methods of integrating data to uncover genotype–phenotype interactions

(2015) Marylyn D. Ritchie et al.   NATURE REVIEWS GENETICS

High-throughput functional genomics using CRISPR–Cas9

(2015) Ophir Shalem et al.   NATURE REVIEWS GENETICS

Reduction of Energetic Demands through Modification of Body Size and Routine Metabolic Rates in Extremophile Fish

(2015) Courtney N. Passow et al.   PHYSIOLOGICAL AND BIOCHEMICAL ZOOLOGY

Melanocortin 4 receptor mutations contribute to the adaptation of cavefish to nutrient-poor conditions

(2015) Ariel C. Aspiras et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Eco-evolutionary dynamics in an urbanizing planet

(2015) Marina Alberti   TRENDS IN ECOLOGY & EVOLUTION

The Molecular Basis of Phenotypic Convergence

(2014) Erica Bree Rosenblum et al.   Annual Review of Ecology Evolution and Systematics

The Aryl Hydrocarbon Receptor: Multitasking in the Immune System

(2014) Brigitta Stockinger et al.   Annual Review of Immunology

Highly efficient multiplex targeted mutagenesis and genomic structure variation in Bombyx mori cells using CRISPR/Cas9

(2014) Yuanyuan Liu et al.   INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY

Selection from parasites favours immunogenetic diversity but not divergence among locally adapted host populations

(2014) M. Tobler et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Mitonuclear interactions: evolutionary consequences over multiple biological scales

(2014) J. N. Wolff et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Applying evolutionary biology to address global challenges

(2014) S. P. Carroll et al.   SCIENCE

The new frontier of genome engineering with CRISPR-Cas9

(2014) J. A. Doudna et al.   SCIENCE

Parallel evolution of cox genes in H2S-tolerant fish as key adaptation to a toxic environment

(2014) Markus Pfenninger et al.   Nature Communications

Cytonuclear Genomic Interactions and Hybrid Breakdown

(2013) Ronald S. Burton et al.   Annual Review of Ecology Evolution and Systematics

Beyond the zebrafish: diverse fish species for modeling human disease

(2013) M. Schartl   Disease Models & Mechanisms

Colonisation of toxic environments drives predictable life-history evolution in livebearing fishes (Poeciliidae)

(2013) Rüdiger Riesch et al.   ECOLOGY LETTERS

GENETIC DIFFERENTIATION AND SELECTION AGAINST MIGRANTS IN EVOLUTIONARILY REPLICATED EXTREME ENVIRONMENTS

(2013) Martin Plath et al.   EVOLUTION

Social insect genomes exhibit dramatic evolution in gene composition and regulation while preserving regulatory features linked to sociality

(2013) D. F. Simola et al.   GENOME RESEARCH

The Role of Methylation of DNA in Environmental Adaptation

(2013) K. B. Flores et al.   INTEGRATIVE AND COMPARATIVE BIOLOGY

Physiological Responses to Shifts in Multiple Environmental Stressors: Relevance in a Changing World

(2013) A. E. Todgham et al.   INTEGRATIVE AND COMPARATIVE BIOLOGY

Bridging the genotype-phenotype gap: what does it take?

(2013) Arne B. Gjuvsland et al.   JOURNAL OF PHYSIOLOGY-LONDON

The genome of the platyfish, Xiphophorus maculatus, provides insights into evolutionary adaptation and several complex traits

(2013) Manfred Schartl et al.   NATURE GENETICS

The Rediscovery of a Long Described Species Reveals Additional Complexity in Speciation Patterns of Poeciliid Fishes in Sulfide Springs

(2013) Maura Palacios et al.   PLoS One

Cryptic Variation in Morphological Evolution: HSP90 as a Capacitor for Loss of Eyes in Cavefish

(2013) N. Rohner et al.   SCIENCE

Genomic resources for a model in adaptation and speciation research: characterization of the Poecilia mexicana transcriptome

(2012) Joanna L Kelley et al.   BMC GENOMICS

Comparative genomics in ecological physiology: toward a more nuanced understanding of acclimation and adaptation

(2012) A. Whitehead   JOURNAL OF EXPERIMENTAL BIOLOGY

Phylogeny and biogeography of the Poecilia sphenops species complex (Actinopterygii, Poeciliidae) in Central America

(2012) Fernando Alda et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Butterfly genome reveals promiscuous exchange of mimicry adaptations among species

(2012) Kanchon K. Dasmahapatra et al.   NATURE

Physiological Implications of Hydrogen Sulfide: A Whiff Exploration That Blossomed

(2012) Rui Wang   PHYSIOLOGICAL REVIEWS

Constraint shapes convergence in tetrodotoxin-resistant sodium channels of snakes

(2012) C. R. Feldman et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Evolutionary and comparative aspects of nitric oxide, carbon monoxide and hydrogen sulfide

(2012) Kenneth R. Olson et al.   RESPIRATORY PHYSIOLOGY & NEUROBIOLOGY

What is needed for next-generation ecological and evolutionary genomics?

(2012) Scott A. Pavey et al.   TRENDS IN ECOLOGY & EVOLUTION

Eco-evolutionary responses of biodiversity to climate change

(2012) Jon Norberg et al.   Nature Climate Change

The therapeutic potential of hydrogen sulfide: separating hype from hope

(2011) Kenneth R. Olson   AMERICAN JOURNAL OF PHYSIOLOGY-REGULATORY INTEGRATIVE AND COMPARATIVE PHYSIOLOGY

A Model for Optimal Offspring Size in Fish, Including Live-Bearing and Parental Effects

(2011) Christian Jørgensen et al.   AMERICAN NATURALIST

Hydrogen Sulfide and Cell Signaling

(2011) Ling Li et al.   Annual Review of Pharmacology and Toxicology

Modulation of Ion Channels by Hydrogen Sulfide

(2011) Chris Peers et al.   ANTIOXIDANTS & REDOX SIGNALING

Hydrogen sulfide, bacteria, and fish: a unique, subterranean food chain

(2011) Katherine A. Roach et al.   ECOLOGY

Quantitative genetics approaches to study evolutionary processes in ecotoxicology; a perspective from research on the evolution of resistance

(2011) Paul L. Klerks et al.   ECOTOXICOLOGY

PARALLEL AND NONPARALLEL ASPECTS OF ECOLOGICAL, PHENOTYPIC, AND GENETIC DIVERGENCE ACROSS REPLICATE POPULATION PAIRS OF LAKE AND STREAM STICKLEBACK

(2011) Renaud Kaeuffer et al.   EVOLUTION

EVOLUTION IN EXTREME ENVIRONMENTS: REPLICATED PHENOTYPIC DIFFERENTIATION IN LIVEBEARING FISH INHABITING SULFIDIC SPRINGS

(2011) Michael Tobler et al.   EVOLUTION

Convergent Patterns of Body Shape Differentiation in Four Different Clades of Poeciliid Fishes Inhabiting Sulfide Springs

(2011) Michael Tobler et al.   Evolutionary Biology

Evolution Under Environmental Stress at Macro- and Microscales

(2011) Eviatar Nevo   Genome Biology and Evolution

Magic traits in speciation: ‘magic’ but not rare?

(2011) Maria R. Servedio et al.   TRENDS IN ECOLOGY & EVOLUTION

Hydrogen Sulfide and Hemeproteins: Knowledge and Mysteries

(2010) Ruth Pietri et al.   ANTIOXIDANTS & REDOX SIGNALING

Speciation through cytonuclear incompatibility: Insights from yeast and implications for higher eukaryotes

(2010) Jui-Yu Chou et al.   BIOESSAYS

Extreme habitats are not refuges: poeciliids suffer from increased aerial predation risk in sulphidic southern Mexican habitats

(2010) RÜDIGER RIESCH et al.   BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

Locally adapted fish populations maintain small-scale genetic differentiation despite perturbation by a catastrophic flood event

(2010) Martin Plath et al.   BMC EVOLUTIONARY BIOLOGY

Conservation genetics of population bottlenecks: the role of chance, selection, and history

(2010) Juan L. Bouzat   CONSERVATION GENETICS

“SAME SAME BUT DIFFERENT”: REPLICATED ECOLOGICAL SPECIATION AT WHITE SANDS

(2010) Erica Bree Rosenblum et al.   EVOLUTION

INTEGRATING EVOLUTIONARY AND FUNCTIONAL APPROACHES TO INFER ADAPTATION AT SPECIFIC LOCI

(2010) Jay F. Storz et al.   EVOLUTION

Role of epibenthic resource opportunities in the parallel evolution of lake whitefish species pairs (Coregonus sp.)

(2010) L. LANDRY et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Dealing with methionine/homocysteine sulfur: cysteine metabolism to taurine and inorganic sulfur

(2010) Martha H. Stipanuk et al.   JOURNAL OF INHERITED METABOLIC DISEASE

Phenomics: the next challenge

(2010) David Houle et al.   NATURE REVIEWS GENETICS

Functional and Evolutionary Insights from the Genomes of Three Parasitoid Nasonia Species

(2010) J. H. Werren et al.   SCIENCE

Variation along the shy–bold continuum in extremophile fishes (Poecilia mexicana, Poecilia sulphuraria)

(2009) Rüdiger Riesch et al.   BEHAVIORAL ECOLOGY AND SOCIOBIOLOGY

Mitochondrial bioenergetics as a major motive force of speciation

(2009) Moran Gershoni et al.   BIOESSAYS

Threatened fishes of the world: Poecilia sulphuraria (Alvarez, 1948) (Poeciliidae)

(2009) Michael Tobler et al.   ENVIRONMENTAL BIOLOGY OF FISHES

Threatened fishes of the world: Gambusia eurystoma Miller, 1975 (Poeciliidae)

(2009) Michael Tobler et al.   ENVIRONMENTAL BIOLOGY OF FISHES

Linking genotypes to phenotypes and fitness: how mechanistic biology can inform molecular ecology

(2009) ANNE C. DALZIEL et al.   MOLECULAR ECOLOGY

Sequencing technologies — the next generation

(2009) Michael L. Metzker   NATURE REVIEWS GENETICS

Convergent life-history shifts: toxic environments result in big babies in two clades of poeciliids

(2009) Rüdiger Riesch et al.   NATURWISSENSCHAFTEN

On the Origin of Species by Natural and Sexual Selection

(2009) G. S. van Doorn et al.   SCIENCE

Adaptive Evolution of Pelvic Reduction in Sticklebacks by Recurrent Deletion of a Pitx1 Enhancer

(2009) Y. F. Chan et al.   SCIENCE

Evidence for Ecological Speciation and Its Alternative

(2009) D. Schluter   SCIENCE

H2S Signals Through Protein S-Sulfhydration

(2009) A. K. Mustafa et al.   Science Signaling

The great opportunity: Evolutionary applications to medicine and public health

(2008) Randolph M. Nesse et al.   Evolutionary Applications

Three enzymatic activities catalyze the oxidation of sulfide to thiosulfate in mammalian and invertebrate mitochondria

(2008) Tatjana M. Hildebrandt et al.   FEBS Journal

Statistical Power Analysis of Neutrality Tests Under Demographic Expansions, Contractions and Bottlenecks With Recombination

(2008) A. Ramirez-Soriano et al.   GENETICS

The inhibition of mitochondrial cytochrome oxidase by the gases carbon monoxide, nitric oxide, hydrogen cyanide and hydrogen sulfide: chemical mechanism and physiological significance

(2008) Chris E. Cooper et al.   JOURNAL OF BIOENERGETICS AND BIOMEMBRANES

Tuning gene expression to changing environments: from rapid responses to evolutionary adaptation

(2008) Luis López-Maury et al.   NATURE REVIEWS GENETICS

RNA-Seq: a revolutionary tool for transcriptomics

(2008) Zhong Wang et al.   NATURE REVIEWS GENETICS

Male mating behavior and costs of sexual harassment for females in cavernicolous and extremophile populations of Atlantic mollies (Poecilia mexicana)

(2007) Martin Plath   BEHAVIOUR