Genomic selection for grain yield and quality traits in durum wheat

Predicting genomic selection efficiency to optimize calibration set and to assess prediction accuracy in highly structured populations

(2017) R. Rincent et al.   THEORETICAL AND APPLIED GENETICS

Genomic Selection in Plant Breeding: Methods, Models, and Perspectives

(2017) José Crossa et al.   TRENDS IN PLANT SCIENCE

Genome-Wide Association and Prediction of Grain and Semolina Quality Traits in Durum Wheat Breeding Populations

(2017) Jason D. Fiedler et al.   Plant Genome

Genomic Selection for Drought Tolerance Using Genome-Wide SNPs in Maize

(2017) Mittal Shikha et al.   Frontiers in Plant Science

Single Marker and Haplotype-Based Association Analysis of Semolina and Pasta Colour in Elite Durum Wheat Breeding Lines Using a High-Density Consensus Map

(2017) Amidou N’Diaye et al.   PLoS One

Genomic Selection Accuracy using Multifamily Prediction Models in a Wheat Breeding Program

(2017) Elliot L. Heffner et al.   Plant Genome

Breeding schemes for the implementation of genomic selection in wheat ( Triticum spp . )

(2016) Filippo M. Bassi et al.   PLANT SCIENCE

Genomic Prediction of Gene Bank Wheat Landraces

(2016) José Crossa et al.   G3-Genes Genomes Genetics

Genomic Selection for Processing and End-Use Quality Traits in the CIMMYT Spring Bread Wheat Breeding Program

(2016) Sarah D. Battenfield et al.   Plant Genome

Accuracy of genomic selection for alfalfa biomass yield in different reference populations

(2015) Paolo Annicchiarico et al.   BMC GENOMICS

Multienvironment Validation of the Effectiveness of Phenotypic and Genomewide Selection within Biparental Maize Populations

(2015) Lisa-Marie Krchov et al.   CROP SCIENCE

Perspectives for Genomic Selection Applications and Research in Plants

(2015) Nicolas Heslot et al.   CROP SCIENCE

Joint prediction of multiple quantitative traits using a Bayesian multivariate antedependence model

(2015) J Jiang et al.   HEREDITY

Association mapping and genomic prediction for resistance to sudden death syndrome in early maturing soybean germplasm

(2015) Yong Bao et al.   MOLECULAR BREEDING

Prediction of malting quality traits in barley based on genome-wide marker data to assess the potential of genomic selection

(2015) Malthe Schmidt et al.   THEORETICAL AND APPLIED GENETICS

Multiple-trait- and selection indices-genomic predictions for grain yield and protein content in rye for feeding purposes

(2015) Albert Wilhelm Schulthess et al.   THEORETICAL AND APPLIED GENETICS

Comparison of Genomic Selection Models to Predict Flowering Time and Spike Grain Number in Two Hexaploid Wheat Doubled Haploid Populations

(2015) Saravanan Thavamanikumar et al.   G3-Genes Genomes Genetics

Assessing Genomic Selection Prediction Accuracy in a Dynamic Barley Breeding Population

(2015) A. H. Sallam et al.   Plant Genome

Efficient Use of Historical Data for Genomic Selection: A Case Study of Stem Rust Resistance in Wheat

(2015) J. Rutkoski et al.   Plant Genome

Genomic Selection and Association Mapping in Rice (Oryza sativa): Effect of Trait Genetic Architecture, Training Population Composition, Marker Number and Statistical Model on Accuracy of Rice Genomic Selection in Elite, Tropical Rice Breeding Lines

(2015) Jennifer Spindel et al.   PLoS Genetics

Genomic Tools in Pea Breeding Programs: Status and Perspectives

(2015) Nadim Tayeh et al.   Frontiers in Plant Science

GplusE: beyond genomic selection

(2015) Ian Mackay et al.   Food and Energy Security

Comparison of single-trait and multiple-trait genomic prediction models

(2014) Gang Guo et al.   BMC GENETICS

The accuracy of prediction of genomic selection in elite hybrid rye populations surpasses the accuracy of marker-assisted selection and is equally augmented by multiple field evaluation locations and test years

(2014) Yu Wang et al.   BMC GENOMICS

Evaluation of Genomic Selection Training Population Designs and Genotyping Strategies in Plant Breeding Programs Using Simulation

(2014) John M. Hickey et al.   CROP SCIENCE

Genome-Wide Regression and Prediction with the BGLR Statistical Package

(2014) P. Perez et al.   GENETICS

Durum wheat genomics comes of age

(2014) Roberto Tuberosa et al.   MOLECULAR BREEDING

Genome-wide prediction of three important traits in bread wheat

(2014) Gilles Charmet et al.   MOLECULAR BREEDING

A high-density, SNP-based consensus map of tetraploid wheat as a bridge to integrate durum and bread wheat genomics and breeding

(2014) Marco Maccaferri et al.   PLANT BIOTECHNOLOGY JOURNAL

Genomic prediction for rust resistance in diverse wheat landraces

(2014) Hans D. Daetwyler et al.   THEORETICAL AND APPLIED GENETICS

A Bayesian method and its variational approximation for prediction of genomic breeding values in multiple traits

(2013) Takeshi Hayashi et al.   BMC BIOINFORMATICS

Genomic selection in sugar beet breeding populations

(2013) Tobias Würschum et al.   BMC GENETICS

Genomic Predictability of Interconnected Biparental Maize Populations

(2013) C. Riedelsheimer et al.   GENETICS

Experimental assessment of the accuracy of genomic selection in sugarcane

(2013) M. Gouy et al.   THEORETICAL AND APPLIED GENETICS

Increased Genomic Prediction Accuracy in Wheat Breeding Through Spatial Adjustment of Field Trial Data

(2013) Bettina Lado et al.   G3-Genes Genomes Genetics

Genomic Selection Accuracy using Historical Data Generated in a Wheat Breeding Program

(2013) Eric Storlie et al.   Plant Genome

Comparison of whole-genome prediction models for traits with contrasting genetic architecture in a diversity panel of maize inbred lines

(2012) Christian Riedelsheimer et al.   BMC GENOMICS

Potential and Optimization of Genomic Selection for Fusarium Head Blight Resistance in Six-Row Barley

(2012) A. J. Lorenz et al.   CROP SCIENCE

Multiple-Trait Genomic Selection Methods Increase Genetic Value Prediction Accuracy

(2012) Yi Jia et al.   GENETICS

A major QTL for gluten strength in durum wheat (Triticum turgidum L. var. durum)

(2012) Ajay Kumar et al.   JOURNAL OF CEREAL SCIENCE

Potential for detection of marker–trait associations in durum wheat using unbalanced, historical phenotypic datasets

(2012) C. J. Pozniak et al.   MOLECULAR BREEDING

Genomic selection for growth and wood quality in Eucalyptus: capturing the missing heritability and accelerating breeding for complex traits in forest trees

(2012) Marcos D. V. Resende et al.   NEW PHYTOLOGIST

A high-density consensus map of A and B wheat genomes

(2012) Daniela Marone et al.   THEORETICAL AND APPLIED GENETICS

Genome-based prediction of test cross performance in two subsequent breeding cycles

(2012) Nina Hofheinz et al.   THEORETICAL AND APPLIED GENETICS

Evaluation of Genomic Prediction Methods for Fusarium Head Blight Resistance in Wheat

(2012) Jessica Rutkoski et al.   Plant Genome

Genomic Selection in Wheat Breeding using Genotyping-by-Sequencing

(2012) Jesse Poland et al.   Plant Genome

Genomic selection in plant breeding: from theory to practice

(2011) J.-L. Jannink et al.   Briefings in Functional Genomics

Forty-six years of genetic improvement in Canadian durum wheat cultivars

(2011) J.M. Clarke et al.   CANADIAN JOURNAL OF PLANT SCIENCE

Genomic Selection Accuracy for Grain Quality Traits in Biparental Wheat Populations

(2011) Elliot L. Heffner et al.   CROP SCIENCE

Genomic Selection in Plant Breeding: A Comparison of Models

(2011) Nicolas Heslot et al.   CROP SCIENCE

Mapping of main and epistatic effect QTLs associated to grain protein and gluten strength using a RIL population of durum wheat

(2011) Veronica Conti et al.   JOURNAL OF APPLIED GENETICS

Accuracy of genomic selection in European maize elite breeding populations

(2011) Yusheng Zhao et al.   THEORETICAL AND APPLIED GENETICS

Accuracy and Training Population Design for Genomic Selection on Quantitative Traits in Elite North American Oats

(2011) Franco G. Asoro et al.   Plant Genome

Ridge Regression and Other Kernels for Genomic Selection with R Package rrBLUP

(2011) Jeffrey B. Endelman   Plant Genome

Discriminant analysis of principal components: a new method for the analysis of genetically structured populations

(2010) Thibaut Jombart et al.   BMC GENETICS

Protein concentration inheritance and selection in durum wheat

(2010) F R Clarke et al.   CANADIAN JOURNAL OF PLANT SCIENCE

Gluten index compared with SDS-sedimentation volume for early generation selection for gluten strength in durum wheat

(2010) F R Clarke et al.   CANADIAN JOURNAL OF PLANT SCIENCE

The Impact of Genetic Architecture on Genome-Wide Evaluation Methods

(2010) H. D. Daetwyler et al.   GENETICS

Prediction of Genetic Values of Quantitative Traits in Plant Breeding Using Pedigree and Molecular Markers

(2010) J. Crossa et al.   GENETICS

Preliminary investigation on reliability of genomic estimated breeding values in the Danish Holstein population

(2010) G. Su et al.   JOURNAL OF DAIRY SCIENCE

Multi-trait BLUP in half-sib selection of annual crops

(2010) J. M. S. Viana et al.   PLANT BREEDING

Genomic-Enabled Prediction Based on Molecular Markers and Pedigree Using the Bayesian Linear Regression Package in R

(2010) Paulino Pérez et al.   Plant Genome

Factors Affecting Accuracy From Genomic Selection in Populations Derived From Multiple Inbred Lines: A Barley Case Study

(2009) S. Zhong et al.   GENETICS

Molecular mapping of QTLs for gluten strength as measured by sedimentation volume and mixograph in durum wheat (Triticum turgidum L. ssp durum)

(2009) R.M. Patil et al.   JOURNAL OF CEREAL SCIENCE

Invited review: Genomic selection in dairy cattle: Progress and challenges

(2009) B.J. Hayes et al.   JOURNAL OF DAIRY SCIENCE

Mapping genes for complex traits in domestic animals and their use in breeding programmes

(2009) Michael E. Goddard et al.   NATURE REVIEWS GENETICS

Efficient Methods to Compute Genomic Predictions

(2008) P.M. VanRaden   JOURNAL OF DAIRY SCIENCE

Invited Review: Reliability of genomic predictions for North American Holstein bulls

(2008) P.M. VanRaden et al.   JOURNAL OF DAIRY SCIENCE

The Bayesian Lasso

(2008) Trevor Park et al.   JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION