Experimental assessment of the accuracy of genomic selection in sugarcane

MCMC Methods for Multi-Response Generalized Linear Mixed Models: TheMCMCglmmRPackage

(2015) Jarrod D. Hadfield   Journal of Statistical Software

Accuracy of Genomic Selection Methods in a Standard Data Set of Loblolly Pine (Pinus taeda L.)

(2012) M. F. R. Resende et al.   GENETICS

Whole-Genome Regression and Prediction Methods Applied to Plant and Animal Breeding

(2012) G. de los Campos et al.   GENETICS

Rapid Prediction of the Lignocellulosic Compounds of Sugarcane Biomass by near Infrared Reflectance Spectroscopy: Comparing Classical and Independent Cross-Validation

(2012) Damien Sabatier et al.   JOURNAL OF NEAR INFRARED SPECTROSCOPY

Utilization of a major brown rust resistance gene in sugarcane breeding

(2012) Neil C. Glynn et al.   MOLECULAR BREEDING

Genomic selection for growth and wood quality in Eucalyptus: capturing the missing heritability and accelerating breeding for complex traits in forest trees

(2012) Marcos D. V. Resende et al.   NEW PHYTOLOGIST

A major quantitative trait allele for resistance to theSugarcane yellow leaf virus(Luteoviridae)

(2012) Laurent Costet et al.   PLANT BREEDING

Haplotype structure around Bru1 reveals a narrow genetic basis for brown rust resistance in modern sugarcane cultivars

(2012) L. Costet et al.   THEORETICAL AND APPLIED GENETICS

Efficiency of genomic selection with models including dominance effect in the context of Eucalyptus breeding

(2012) Marie Denis et al.   Tree Genetics & Genomes

Evaluation of Genomic Prediction Methods for Fusarium Head Blight Resistance in Wheat

(2012) Jessica Rutkoski et al.   Plant Genome

Genomic selection in plant breeding: from theory to practice

(2011) J.-L. Jannink et al.   Briefings in Functional Genomics

Genomic Selection in Plant Breeding: A Comparison of Models

(2011) Nicolas Heslot et al.   CROP SCIENCE

Evaluation of genome-wide selection efficiency in maize nested association mapping populations

(2011) Zhigang Guo et al.   THEORETICAL AND APPLIED GENETICS

Ridge Regression and Other Kernels for Genomic Selection with R Package rrBLUP

(2011) Jeffrey B. Endelman   Plant Genome

Sugarcane (Saccharum X officinarum): A Reference Study for the Regulation of Genetically Modified Cultivars in Brazil

(2011) Adriana Cheavegatti-Gianotto et al.   Tropical Plant Biology

Prediction of Genetic Values of Quantitative Traits in Plant Breeding Using Pedigree and Molecular Markers

(2010) J. Crossa et al.   GENETICS

Simultaneously accounting for population structure, genotype by environment interaction, and spatial variation in marker–trait associations in sugarcaneThis article is one of a selection of papers from the conference “Exploiting Genome-wide Association in Oilseed Brassicas: a model for genetic improvement of major OECD crops for sustainable farming”.

(2010) Xianming Wei et al.   GENOME

Diversity Arrays Technology effectively reveals DNA polymorphism in a large and complex genome of sugarcane

(2010) Katarzyna Heller-Uszynska et al.   MOLECULAR BREEDING

Genomic-Enabled Prediction Based on Molecular Markers and Pedigree Using the Bayesian Linear Regression Package in R

(2010) Paulino Pérez et al.   Plant Genome

Analysis of genomic and functional RFLP derived markers associated with sucrose content, fiber and yield QTLs in a sugarcane (Saccharum spp.) commercial cross

(2009) L. R. Pinto et al.   EUPHYTICA

Factors Affecting Accuracy From Genomic Selection in Populations Derived From Multiple Inbred Lines: A Barley Case Study

(2009) S. Zhong et al.   GENETICS

The Accuracy of Genomic Selection in Norwegian Red Cattle Assessed by Cross-Validation

(2009) T. Luan et al.   GENETICS

Accuracy of Genomic Selection Using Different Methods to Define Haplotypes

(2008) M. P. L. Calus et al.   GENETICS

Linkage Disequilibrium and Persistence of Phase in Holstein-Friesian, Jersey and Angus Cattle

(2008) A. P. W. de Roos et al.   GENETICS

Genomic selection using different marker types and densities

(2008) T. R. Solberg et al.   JOURNAL OF ANIMAL SCIENCE

Invited Review: Reliability of genomic predictions for North American Holstein bulls

(2008) P.M. VanRaden et al.   JOURNAL OF DAIRY SCIENCE

The Bayesian Lasso

(2008) Trevor Park et al.   JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION

Analysis of genome-wide linkage disequilibrium in the highly polyploid sugarcane

(2008) Louis-Marie Raboin et al.   THEORETICAL AND APPLIED GENETICS

Genetic control of yield related stalk traits in sugarcane

(2008) K. S. Aitken et al.   THEORETICAL AND APPLIED GENETICS

Marker-assisted selection: an approach for precision plant breeding in the twenty-first century

(2007) B. C.Y Collard et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES