Image co-localization – co-occurrence versus correlation

Turning single-molecule localization microscopy into a quantitative bioanalytical tool

(2017) Philip R Nicovich et al.   Nature Protocols

Decoupling global biases and local interactions between cell biological variables

(2017) Assaf Zaritsky et al.   eLife

Regulation of Cancer Cell Behavior by the Small GTPase Rab13

(2016) Maria S. Ioannou et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Nanometer resolved single-molecule colocalization of nuclear factors by two-color super resolution microscopy imaging

(2016) Mariya Georgieva et al.   METHODS

Statistical analysis of molecule colocalization in bioimaging

(2015) Thibault Lagache et al.   CYTOMETRY PART A

A general method to improve fluorophores for live-cell and single-molecule microscopy

(2015) Jonathan B Grimm et al.   NATURE METHODS

Quantitative analysis of single-molecule superresolution images

(2014) Carla Coltharp et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Method for co-cluster analysis in multichannel single-molecule localisation data

(2014) Jérémie Rossy et al.   HISTOCHEMISTRY AND CELL BIOLOGY

Chronic enrichment of hepatic endoplasmic reticulum–mitochondria contact leads to mitochondrial dysfunction in obesity

(2014) Ana Paula Arruda et al.   NATURE MEDICINE

Vinculin Regulates the Recruitment and Release of Core Focal Adhesion Proteins in a Force-Dependent Manner

(2013) Alex Carisey et al.   CURRENT BIOLOGY

Instant super-resolution imaging in live cells and embryos via analog image processing

(2013) Andrew G York et al.   NATURE METHODS

Integrin-dependent force transmission to the extracellular matrix by  -actinin triggers adhesion maturation

(2013) P. Roca-Cusachs et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Bridging the gap between qualitative and quantitative colocalization results in fluorescence microscopy studies

(2013) Vadim Zinchuk et al.   Scientific Reports

Patchwork organization of the yeast plasma membrane into numerous coexisting domains

(2012) Felix Spira et al.   NATURE CELL BIOLOGY

A practical guide to evaluating colocalization in biological microscopy

(2011) Kenneth W. Dunn et al.   AMERICAN JOURNAL OF PHYSIOLOGY-CELL PHYSIOLOGY

Advances in the chemistry of small molecule fluorescent probes

(2011) Laura M Wysocki et al.   CURRENT OPINION IN CHEMICAL BIOLOGY

Coordinate-based colocalization analysis of single-molecule localization microscopy data

(2011) Sebastian Malkusch et al.   HISTOCHEMISTRY AND CELL BIOLOGY

Increased ER-mitochondrial coupling promotes mitochondrial respiration and bioenergetics during early phases of ER stress

(2011) R. Bravo et al.   JOURNAL OF CELL SCIENCE

Mitochondrial Parkin Recruitment Is Impaired in Neurons Derived from Mutant PINK1 Induced Pluripotent Stem Cells

(2011) P. Seibler et al.   JOURNAL OF NEUROSCIENCE

Mitochondrial-associated endoplasmic reticulum membranes (MAM) form innate immune synapses and are targeted by hepatitis C virus

(2011) S. M. Horner et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Beyond co-localization: inferring spatial interactions between sub-cellular structures from microscopy images

(2010) Jo A Helmuth et al.   BMC BIOINFORMATICS

Viral Reorganization of the Secretory Pathway Generates Distinct Organelles for RNA Replication

(2010) Nai-Yun Hsu et al.   CELL

Quantifying colocalization by correlation: The Pearson correlation coefficient is superior to the Mander's overlap coefficient

(2010) Jeremy Adler et al.   CYTOMETRY PART A

Image Scanning Microscopy

(2010) Claus B. Müller et al.   PHYSICAL REVIEW LETTERS

Fluorescent Proteins and Their Applications in Imaging Living Cells and Tissues

(2010) Dmitriy M. Chudakov et al.   PHYSIOLOGICAL REVIEWS

On the Use of Ripley's K-Function and Its Derivatives to Analyze Domain Size

(2009) Maria A. Kiskowski et al.   BIOPHYSICAL JOURNAL

Accuracy and precision in quantitative fluorescence microscopy

(2009) Jennifer C. Waters   JOURNAL OF CELL BIOLOGY

Three-Dimensional Resolution Doubling in Wide-Field Fluorescence Microscopy by Structured Illumination

(2008) Mats G.L. Gustafsson et al.   BIOPHYSICAL JOURNAL

Ordered Assembly of the ESCRT-III Complex on Endosomes Is Required to Sequester Cargo during MVB Formation

(2008) David Teis et al.   DEVELOPMENTAL CELL

Replicate-based noise corrected correlation for accurate measurements of colocalization

(2008) J. ADLER et al.   JOURNAL OF MICROSCOPY

Membrane Phosphatidylserine Regulates Surface Charge and Protein Localization

(2008) T. Yeung et al.   SCIENCE

Subdiffraction Multicolor Imaging of the Nuclear Periphery with 3D Structured Illumination Microscopy

(2008) L. Schermelleh et al.   SCIENCE

Simultaneous Transport of Different Localized mRNA Species Revealed by Live-Cell Imaging

(2008) Susanne Lange et al.   TRAFFIC