Natural Yeast Promoter Variants Reveal Epistasis in the Generation of Transcriptional-Mediated Noise and Its Potential Benefit in Stressful Conditions

Oxidative stress response and nitrogen utilization are strongly variable in Saccharomyces cerevisiae wine strains with different fermentation performances

(2014) Laura Treu et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Probing the effect of promoters on noise in gene expression using thousands of designed sequences

(2014) Eilon Sharon et al.   GENOME RESEARCH

Regulation of Noise in Gene Expression

(2013) Alvaro Sanchez et al.   Annual Review of Biophysics

Differential adaptation to multi-stressed conditions of wine fermentation revealed by variations in yeast regulatory networks

(2013) Christian Brion et al.   BMC GENOMICS

The molecular basis of phenotypic variation in yeast

(2013) Justin C Fay   CURRENT OPINION IN GENETICS & DEVELOPMENT

Polygenic Molecular Architecture Underlying Non-Sexual Cell Aggregation in Budding Yeast

(2013) J. Li et al.   DNA RESEARCH

Phenotypic heterogeneity is a selected trait in natural yeast populations subject to environmental stress

(2013) Sara L. Holland et al.   ENVIRONMENTAL MICROBIOLOGY

Two DNA-encoded strategies for increasing expression with opposing effects on promoter dynamics and transcriptional noise

(2013) M. Dadiani et al.   GENOME RESEARCH

Natural sequence variants of yeast environmental sensors confer cell-to-cell expression variability

(2013) S. Fehrmann et al.   Molecular Systems Biology

Adaptive noise

(2013) M. Viney et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Genetic Determinants and Cellular Constraints in Noisy Gene Expression

(2013) A. Sanchez et al.   SCIENCE

Promoter Sequence Determines the Relationship between Expression Level and Noise

(2013) Lucas B. Carey et al.   PLOS BIOLOGY

Dynamic Large-Scale Chromosomal Rearrangements Fuel Rapid Adaptation in Yeast Populations

(2013) Shang-Lin Chang et al.   PLoS Genetics

Comparative genomics: a revolutionary tool for wine yeast strain development

(2012) Anthony R Borneman et al.   CURRENT OPINION IN BIOTECHNOLOGY

Noise-mean relationship in mutated promoters

(2012) G. Hornung et al.   GENOME RESEARCH

Analysis of the Saccharomyces cerevisiae pan-genome reveals a pool of copy number variants distributed in diverse yeast strains from differing industrial environments

(2012) B. Dunn et al.   GENOME RESEARCH

Microbial individuality in the natural environment

(2012) M Ackermann   ISME Journal

Amplification of the CUP1 gene is associated with evolution of copper tolerance in Saccharomyces cerevisiae

(2012) G. M. Adamo et al.   MICROBIOLOGY-SGM

The Genetic Basis of Natural Variation in Oenological Traits in Saccharomyces cerevisiae

(2012) Francisco Salinas et al.   PLoS One

Interplay between gene expression noise and regulatory network architecture

(2012) Guilhem Chalancon et al.   TRENDS IN GENETICS

Advances in Quantitative Trait Analysis in Yeast

(2012) Gianni Liti et al.   PLoS Genetics

Expression variability of co-regulated genes differentiates Saccharomyces cerevisiae strains

(2011) Laura Carreto et al.   BMC GENOMICS

Cellular Decision Making and Biological Noise: From Microbes to Mammals

(2011) Gábor Balázsi et al.   CELL

The genomes of fermentative Saccharomyces

(2011) Sylvie Dequin et al.   COMPTES RENDUS BIOLOGIES

Deciphering the Molecular Basis of Wine Yeast Fermentation Traits Using a Combined Genetic and Genomic Approach

(2011) Chloé Ambroset et al.   G3-Genes Genomes Genetics

The role of physiological heterogeneity in microbial population behavior

(2010) Mary E Lidstrom et al.   Nature Chemical Biology

Tuning and controlling gene expression noise in synthetic gene networks

(2010) Kevin F. Murphy et al.   NUCLEIC ACIDS RESEARCH

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

A chance at survival: gene expression noise and phenotypic diversification strategies

(2009) Dawn Fraser et al.   MOLECULAR MICROBIOLOGY

Positive selection for elevated gene expression noise in yeast

(2009) Zhihua Zhang et al.   Molecular Systems Biology

How selection affects phenotypic fluctuation

(2009) Yoichiro Ito et al.   Molecular Systems Biology

Eukaryote-to-eukaryote gene transfer events revealed by the genome sequence of the wine yeast Saccharomyces cerevisiae EC1118

(2009) M. Novo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Nature, Nurture, or Chance: Stochastic Gene Expression and Its Consequences

(2008) Arjun Raj et al.   CELL

Selection to minimise noise in living systems and its implications for the evolution of gene expression

(2008) Ben Lehner   Molecular Systems Biology

Stochastic switching as a survival strategy in fluctuating environments

(2008) Murat Acar et al.   NATURE GENETICS

Concurrent Fast and Slow Cycling of a Transcriptional Activator at an Endogenous Promoter

(2008) T. S. Karpova et al.   SCIENCE

Cell-to-Cell Stochastic Variation in Gene Expression Is a Complex Genetic Trait

(2008) Juliet Ansel et al.   PLoS Genetics

A Simple Screen to Identify Promoters Conferring High Levels of Phenotypic Noise

(2008) Nikki E. Freed et al.   PLoS Genetics