The Complexity of Mitochondrial Complex IV: An Update of Cytochrome c Oxidase Biogenesis in Plants

Mitochondrial cytochrome c oxidase biogenesis: Recent developments

(2018) Alba Timón-Gómez et al.   SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY

Editing of Mitochondrial Transcripts nad3 and cox2 by Dek10 Is Essential for Mitochondrial Function and Maize Plant Development

(2017) Weiwei Qi et al.   GENETICS

Analysis of the Roles of the Arabidopsis nMAT2 and PMH2 Proteins Provided with New Insights into the Regulation of Group II Intron Splicing in Land-Plant Mitochondria

(2017) Michal Zmudjak et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Building the CuAsite of cytochromecoxidase: A complicated, redox-dependent process driven by a surprisingly large complement of accessory proteins

(2017) Kimberly A. Jett et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

The Cox1 C-terminal domain is a central regulator of cytochrome c oxidase biogenesis in yeast mitochondria

(2017) Rodolfo García-Villegas et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Cox16 protein is physically associated with Cox1p assembly intermediates and with cytochrome oxidase

(2017) Chen-Hsien Su et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Mutational Analysis of the QRRQ Motif in the Yeast Hig1 Type 2 Protein Rcf1 Reveals a Regulatory Role for the CytochromecOxidase Complex

(2017) Joshua Garlich et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Redox regulation of mitochondrial proteins and proteomes by cysteine thiol switches

(2017) Thomas Nietzel et al.   MITOCHONDRION

Systems Phytohormone Responses to Mitochondrial Proteotoxic Stress

(2017) Xu Wang et al.   MOLECULAR CELL

Tissue- and Condition-Specific Isoforms of Mammalian Cytochrome c Oxidase Subunits: From Function to Human Disease

(2017) Christopher A. Sinkler et al.   Oxidative Medicine and Cellular Longevity

Arabidopsis Seed Mitochondria Are Bioenergetically Active Immediately upon Imbibition and Specialize via Biogenesis in Preparation for Autotrophic Growth

(2017) Gaël Paszkiewicz et al.   PLANT CELL

The mitochondrial complexome of Arabidopsis thaliana

(2017) Jennifer Senkler et al.   PLANT JOURNAL

Regulation of Mammalian 13-Subunit Cytochrome c Oxidase and Binding of other Proteins: Role of NDUFA4

(2017) Bernhard Kadenbach   TRENDS IN ENDOCRINOLOGY AND METABOLISM

Learning To Breathe: Developmental Phase Transitions in Oxygen Status

(2017) Michael J. Considine et al.   TRENDS IN PLANT SCIENCE

MR-1S Interacts with PET100 and PET117 in Module-Based Assembly of Human Cytochrome c Oxidase

(2017) Sara Vidoni et al.   Cell Reports

Editing of Mitochondrial Transcripts nad3 and cox2 by Dek10 Is Essential for Mitochondrial Function and Maize Plant Development

(2017) Weiwei Qi et al.   GENETICS

Mitochondrial Cytochrome c Oxidase Biogenesis Is Regulated by the Redox State of a Heme-Binding Translational Activator

(2016) Iliana C. Soto et al.   ANTIOXIDANTS & REDOX SIGNALING

Structure of Mammalian Respiratory Supercomplex I 1 III 2 IV 1

(2016) Meng Wu et al.   CELL

Mitochondrial cytochrome c oxidase deficiency

(2016) M. Rak et al.   CLINICAL SCIENCE

A Novel Function of Pet54 in Regulation of Cox1 Synthesis inSaccharomyces cerevisiaeMitochondria

(2016) Juan Pablo Mayorga et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

The Assembly Factor Pet117 Couples Heme a Synthase Activity to Cytochrome Oxidase Assembly

(2016) Nicholas G. Taylor et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Enhancing cytokinin synthesis by overexpressingiptalleviated drought inhibition of root growth through activating ROS-scavenging systems inAgrostis stolonifera

(2016) Yi Xu et al.   JOURNAL OF EXPERIMENTAL BOTANY

New nodes and edges in the glucosinolate molecular network revealed by proteomics and metabolomics of Arabidopsis myb28 / 29 and cyp79B2 / B3 glucosinolate mutants

(2016) Islam Mostafa et al.   Journal of Proteomics

The architecture of the mammalian respirasome

(2016) Jinke Gu et al.   NATURE

SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations

(2016) Cornelia M. Hooper et al.   NUCLEIC ACIDS RESEARCH

Interaction between hormonal and mitochondrial signalling during growth, development and in plant defence responses

(2016) Oliver Berkowitz et al.   PLANT CELL AND ENVIRONMENT

The Unexpected Diversity of Plant Organelle RNA Editosomes

(2016) Tao Sun et al.   TRENDS IN PLANT SCIENCE

Overlap of copper and iron uptake systems in mitochondria inSaccharomyces cerevisiae

(2016) Katherine E. Vest et al.   Open Biology

Thiol switches in mitochondria: operation and physiological relevance

(2015) Jan Riemer et al.   BIOLOGICAL CHEMISTRY

Integrating Phosphoproteomics and Bioinformatics to Study Brassinosteroid-Regulated Phosphorylation Dynamics in Arabidopsis

(2015) Li-Ling Lin et al.   BMC GENOMICS

Cooperation between COA6 and SCO2 in COX2 Maturation during Cytochrome c Oxidase Assembly Links Two Mitochondrial Cardiomyopathies

(2015) David Pacheu-Grau et al.   Cell Metabolism

Novel links in the plant TOR kinase signaling network

(2015) Yan Xiong et al.   CURRENT OPINION IN PLANT BIOLOGY

COA6 is a mitochondrial complex IV assembly factor critical for biogenesis of mtDNA-encoded COX2

(2015) David A. Stroud et al.   HUMAN MOLECULAR GENETICS

AtCOX10, a protein involved in haemosynthesis during cytochromecoxidase biogenesis, is essential for plant embryogenesis and modulates the progression of senescence

(2015) Natanael Mansilla et al.   JOURNAL OF EXPERIMENTAL BOTANY

Quantitative Phosphoproteomics of the Ataxia Telangiectasia-Mutated (ATM) and Ataxia Telangiectasia-Mutated and Rad3-related (ATR) Dependent DNA Damage Response inArabidopsis thaliana

(2015) Elisabeth Roitinger et al.   MOLECULAR & CELLULAR PROTEOMICS

Redox-regulated dynamic interplay between Cox19 and the copper-binding protein Cox11 in the intermembrane space of mitochondria facilitates biogenesis of cytochrome c oxidase

(2015) Manuela Bode et al.   MOLECULAR BIOLOGY OF THE CELL

MEF13 Requires MORF3 and MORF8 for RNA Editing at Eight Targets in Mitochondrial mRNAs in Arabidopsis thaliana

(2015) Franziska Glass et al.   Molecular Plant

The cytochrome c oxidase biogenesis factor AtCOX17 modulates stress responses in Arabidopsis

(2015) Lucila Garcia et al.   PLANT CELL AND ENVIRONMENT

RNA Recognition Motif-Containing Protein ORRM4 Broadly Affects Mitochondrial RNA Editing and Impacts Plant Development and Flowering

(2015) Xiaowen Shi et al.   PLANT PHYSIOLOGY

Loop recognition and copper-mediated disulfide reduction underpin metal site assembly of CuAin human cytochrome oxidase

(2015) Marcos N. Morgada et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Arabidopsis COX11 Homolog is Essential for Cytochrome c Oxidase Activity

(2015) Ivan Radin et al.   Frontiers in Plant Science

Pentatricopeptide Repeat Proteins in Plants

(2014) Alice Barkan et al.   Annual Review of Plant Biology

Copper supplementation restores cytochrome c oxidase assembly defect in a mitochondrial disease model of COA6 deficiency

(2014) A. Ghosh et al.   HUMAN MOLECULAR GENETICS

Human COX20 cooperates with SCO1 and SCO2 to mature COX2 and promote the assembly of cytochrome c oxidase

(2014) Myriam Bourens et al.   HUMAN MOLECULAR GENETICS

The pentatricopeptide repeat protein MEF26 participates in RNA editing in mitochondrial cox3 and nad4 transcripts

(2014) Anita Arenas-M. et al.   MITOCHONDRION

Mitochondria and copper homeostasis in plants

(2014) Lucila Garcia et al.   MITOCHONDRION

Plant mitochondria under pathogen attack: A sigh of relief or a last breath?

(2014) Francisco Colombatti et al.   MITOCHONDRION

Perturbation of Auxin Homeostasis Caused by Mitochondrial FtSH4 Gene-Mediated Peroxidase Accumulation Regulates Arabidopsis Architecture

(2014) Shengchun Zhang et al.   Molecular Plant

The mitochondrial outer membrane AAA ATPase AtOM66 affects cell death and pathogen resistance inArabidopsis thaliana

(2014) Botao Zhang et al.   PLANT JOURNAL

Disruption of the CYTOCHROME C OXIDASE DEFICIENT1 Gene Leads to Cytochrome c Oxidase Depletion and Reorchestrated Respiratory Metabolism in Arabidopsis

(2014) J. Dahan et al.   PLANT PHYSIOLOGY

Decreasing Electron Flux through the Cytochrome and/or Alternative Respiratory Pathways Triggers Common and Distinct Cellular Responses Dependent on Growth Conditions

(2014) Kristina Kühn et al.   PLANT PHYSIOLOGY

Divergent functions of the Arabidopsis mitochondrial SCO proteins: HCC1 is essential for COX activity while HCC2 is involved in the UV-B stress response

(2014) Iris Steinebrunner et al.   Frontiers in Plant Science

Coordination of plant mitochondrial biogenesis: keeping pace with cellular requirements

(2014) Elina Welchen et al.   Frontiers in Plant Science

Surrogate mutants for studying mitochondrially encoded functions

(2013) Catherine Colas des Francs-Small et al.   BIOCHIMIE

Quantitative Phosphoproteomics after Auxin-stimulated Lateral Root Induction Identifies an SNX1 Protein Phosphorylation Site Required for Growth

(2013) Hongtao Zhang et al.   MOLECULAR & CELLULAR PROTEOMICS

COX19 mediates the transduction of a mitochondrial redox signal from SCO1 that regulates ATP7A-mediated cellular copper efflux

(2013) Scot C. Leary et al.   MOLECULAR BIOLOGY OF THE CELL

Protein import and oxidative folding in the mitochondrial intermembrane space of intact mammalian cells

(2013) Manuel Fischer et al.   MOLECULAR BIOLOGY OF THE CELL

mCSF1, a nucleus-encoded CRM protein required for the processing of many mitochondrial introns, is involved in the biogenesis of respiratory complexes I and IV in Arabidopsis

(2013) Michal Zmudjak et al.   NEW PHYTOLOGIST

Pentatricopeptide repeat proteins involved in plant organellar RNA editing

(2013) Yusuke Yagi et al.   RNA Biology

Cardiac mitochondrial matrix and respiratory complex protein phosphorylation

(2012) Raul Covian et al.   AMERICAN JOURNAL OF PHYSIOLOGY-HEART AND CIRCULATORY PHYSIOLOGY

Redox and Reactive Oxygen Species Regulation of Mitochondrial Cytochrome c Oxidase Biogenesis

(2012) Myriam Bourens et al.   ANTIOXIDANTS & REDOX SIGNALING

Lack of cytochrome c in Arabidopsis decreases stability of Complex IV and modifies redox metabolism without affecting Complexes I and III

(2012) Elina Welchen et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Rcf1 Mediates Cytochrome Oxidase Assembly and Respirasome Formation, Revealing Heterogeneity of the Enzyme Complex

(2012) Milena Vukotic et al.   Cell Metabolism

Glutathione redox potential in the mitochondrial intermembrane space is linked to the cytosol and impacts the Mia40 redox state

(2012) Kerstin Kojer et al.   EMBO JOURNAL

SURF1-associated leigh syndrome: A case series and novel mutations

(2012) Inn-Chi Lee et al.   HUMAN MUTATION

Selective Oma1 Protease-mediated Proteolysis of Cox1 Subunit of Cytochrome Oxidase in Assembly Mutants

(2012) Oleh Khalimonchuk et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Oligomerization of HemeoSynthase in Cytochrome Oxidase Biogenesis Is Mediated by Cytochrome Oxidase Assembly Factor Coa2

(2012) Oleh Khalimonchuk et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

A large-scale protein phosphorylation analysis reveals novel phosphorylation motifs and phosphoregulatory networks in Arabidopsis

(2012) Xu Wang et al.   Journal of Proteomics

Modular assembly of yeast cytochrome oxidase

(2012) Gavin P. McStay et al.   MOLECULAR BIOLOGY OF THE CELL

PGDD: a database of gene and genome duplication in plants

(2012) Tae-Ho Lee et al.   NUCLEIC ACIDS RESEARCH

SLO2, a mitochondrial pentatricopeptide repeat protein affecting several RNA editing sites, is required for energy metabolism

(2012) Qiang Zhu et al.   PLANT JOURNAL

Delta subclass HD-Zip proteins and a B-3 AP2/ERF transcription factor interact with promoter elements required for expression of the Arabidopsis cytochrome c oxidase 5b-1 gene

(2012) Raúl N. Comelli et al.   PLANT MOLECULAR BIOLOGY

Loss of Lon1 in Arabidopsis Changes the Mitochondrial Proteome Leading to Altered Metabolite Profiles and Growth Retardation without an Accumulation of Oxidative Damage

(2012) C. Solheim et al.   PLANT PHYSIOLOGY

Nucleotide and RNA Metabolism Prime Translational Initiation in the Earliest Events of Mitochondrial Biogenesis during Arabidopsis Germination

(2012) S. R. Law et al.   PLANT PHYSIOLOGY

Arabidopsis thaliana Oxa proteins locate to mitochondria and fulfill essential roles during embryo development

(2012) Monique Benz et al.   PLANTA

RIP1, a member of an Arabidopsis protein family, interacts with the protein RARE1 and broadly affects RNA editing

(2012) S. Bentolila et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Multiple organellar RNA editing factor (MORF) family proteins are required for RNA editing in mitochondria and plastids of plants

(2012) M. Takenaka et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Multiple phosphorylations of cytochrome c oxidase and their functions

(2012) Stefan Helling et al.   PROTEOMICS

Cytochrome c oxidase: Evolution of control via nuclear subunit addition

(2011) Denis Pierron et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Biogenesis and assembly of eukaryotic cytochrome c oxidase catalytic core

(2011) Ileana C. Soto et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

The PPR-DYW proteins are required for RNA editing ofrps14,cox1andnad5transcripts inPhyscomitrella patensmitochondria

(2011) Masato Uchida et al.   FEBS LETTERS

The impact of impaired mitochondrial function on retrograde signalling: a meta-analysis of transcriptomic responses

(2011) Markus Schwarzländer et al.   JOURNAL OF EXPERIMENTAL BOTANY

Plants contain two SCO proteins that are differentially involved in cytochrome c oxidase function and copper and redox homeostasis

(2011) Carolina V. Attallah et al.   JOURNAL OF EXPERIMENTAL BOTANY

Phytozome: a comparative platform for green plant genomics

(2011) David M. Goodstein et al.   NUCLEIC ACIDS RESEARCH

Saccharomyces Genome Database: the genomics resource of budding yeast

(2011) J. M. Cherry et al.   NUCLEIC ACIDS RESEARCH

Stress homeostasis - the redox and auxin perspective

(2011) VANESA B. TOGNETTI et al.   PLANT CELL AND ENVIRONMENT

Assigning DYW-type PPR proteins to RNA editing sites in the funariid mosses Physcomitrella patens and Funaria hygrometrica

(2011) Mareike Rüdinger et al.   PLANT JOURNAL

A PORR domain protein required for rpl2 and ccmFC intron splicing and for the biogenesis of c-type cytochromes in Arabidopsis mitochondria

(2011) Catherine Colas des Francs-Small et al.   PLANT JOURNAL

Nitrate and ammonium lead to distinct global dynamic phosphorylation patterns when resupplied to nitrogen-starved Arabidopsis seedlings

(2011) Wolfgang R. Engelsberger et al.   PLANT JOURNAL

A PPR-DYW protein is required for splicing of a group II intron of cox1 pre-mRNA in Physcomitrella patens

(2011) Mizuho Ichinose et al.   PLANT JOURNAL

Defining the Protein Complex Proteome of Plant Mitochondria

(2011) J. Klodmann et al.   PLANT PHYSIOLOGY

Genomicus: a database and a browser to study gene synteny in modern and ancestral genomes

(2010) M. Muffato et al.   BIOINFORMATICS

Reverse Genetic Screening Identifies Five E-class PPR Proteins Involved in RNA Editing in Mitochondria ofArabidopsis thaliana

(2010) Mizuki Takenaka et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Cox25 Teams Up with Mss51, Ssc1, and Cox14 to Regulate Mitochondrial CytochromecOxidase Subunit 1 Expression and Assembly inSaccharomyces cerevisiae

(2010) Flavia Fontanesi et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Conserved and Novel Functions forArabidopsis thalianaMIA40 in Assembly of Proteins in Mitochondria and Peroxisomes

(2010) Chris Carrie et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Coa3 and Cox14 are essential for negative feedback regulation ofCOX1translation in mitochondria

(2010) David U. Mick et al.   JOURNAL OF CELL BIOLOGY

HCC1, the Arabidopsis homologue of the yeast mitochondrial copper chaperone SCO1, is essential for embryonic development

(2010) I. Steinebrunner et al.   JOURNAL OF EXPERIMENTAL BOTANY

Analysis of Leigh Syndrome Mutations in the Yeast SURF1 Homolog Reveals a New Member of the Cytochrome Oxidase Assembly Factor Family

(2010) M. Bestwick et al.   MOLECULAR AND CELLULAR BIOLOGY

Targeted Gene Disruption Identifies Three PPR-DYW Proteins Involved in RNA Editing for Five Editing Sites of the Moss Mitochondrial Transcripts

(2010) Shotaro Ohtani et al.   PLANT AND CELL PHYSIOLOGY

RNA PROCESSING FACTOR2 Is Required for 5' End Processing of nad9 and cox3 mRNAs in Mitochondria of Arabidopsis thaliana

(2010) C. Jonietz et al.   PLANT CELL

TCP Transcription Factors Link the Regulation of Genes Encoding Mitochondrial Proteins with the Circadian Clock inArabidopsis thaliana

(2010) Estelle Giraud et al.   PLANT CELL

MicroRNA-210 Controls Mitochondrial Metabolism during Hypoxia by Repressing the Iron-Sulfur Cluster Assembly Proteins ISCU1/2

(2009) Stephen Y. Chan et al.   Cell Metabolism

Human SCO2 is required for the synthesis of CO II and as a thiol-disulphide oxidoreductase for SCO1

(2009) Scot C. Leary et al.   HUMAN MOLECULAR GENETICS

Systematic Analysis of the Twin Cx9C Protein Family

(2009) Sebastian Longen et al.   JOURNAL OF MOLECULAR BIOLOGY

Formation of the Redox Cofactor Centers during Cox1 Maturation in Yeast Cytochrome Oxidase

(2009) O. Khalimonchuk et al.   MOLECULAR AND CELLULAR BIOLOGY

Mss51 and Ssc1 Facilitate Translational Regulation of Cytochrome c Oxidase Biogenesis

(2009) F. Fontanesi et al.   MOLECULAR AND CELLULAR BIOLOGY

RNA editing: only eleven sites are present in the Physcomitrella patens mitochondrial transcriptome and a universal nomenclature proposal

(2009) Mareike Rüdinger et al.   MOLECULAR GENETICS AND GENOMICS

Defining the Mitochondrial Stress Response in Arabidopsis thaliana

(2009) Olivier Van Aken et al.   Molecular Plant

MIA40 is an oxidoreductase that catalyzes oxidative protein folding in mitochondria

(2009) Lucia Banci et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

MEME SUITE: tools for motif discovery and searching

(2009) T. L. Bailey et al.   NUCLEIC ACIDS RESEARCH

Identification of regulatory elements involved in expression and induction by sucrose and UV-B light of theArabidopsis thaliana COX5b-2gene, encoding an isoform of cytochromecoxidase subunit 5b

(2009) Raúl N. Comelli et al.   PHYSIOLOGIA PLANTARUM

Common Sets of Promoter Elements Determine the Expression Characteristics of Three Arabidopsis Genes Encoding Isoforms of Mitochondrial Cytochrome c Oxidase Subunit 6b

(2009) Eduardo F. Mufarrege et al.   PLANT AND CELL PHYSIOLOGY

Phage-Type RNA Polymerase RPOTmp Performs Gene-Specific Transcription in Mitochondria of Arabidopsis thaliana

(2009) K. Kuhn et al.   PLANT CELL

Characterization of promoter elements required for expression and induction by sucrose of the Arabidopsis COX5b-1 nuclear gene, encoding the zinc-binding subunit of cytochrome c oxidase

(2009) Raúl N. Comelli et al.   PLANT MOLECULAR BIOLOGY

A survey of theArabidopsis thalianamitochondrial phosphoproteome

(2009) Jun Ito et al.   PROTEOMICS

How mitochondria produce reactive oxygen species

(2008) Michael P. Murphy   BIOCHEMICAL JOURNAL

Suppression mechanisms of COX assembly defects in yeast and human: Insights into the COX assembly process

(2008) Antoni Barrientos et al.   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH

Mitochondrial copper metabolism and delivery to cytochromec oxidase

(2008) Darryl Horn et al.   IUBMB LIFE

A segment containing a G-box and an ACGT motif confers differential expression characteristics and responses to the Arabidopsis Cytc-2 gene, encoding an isoform of cytochrome c

(2008) Elina Welchen et al.   JOURNAL OF EXPERIMENTAL BOTANY

Cmc1p Is a Conserved Mitochondrial Twin CX9C Protein Involved in Cytochrome c Oxidase Biogenesis

(2008) D. Horn et al.   MOLECULAR AND CELLULAR BIOLOGY

Repression of the Auxin Response Pathway Increases Arabidopsis Susceptibility to Necrotrophic Fungi

(2008) Francisco Llorente et al.   Molecular Plant

Role of Lon1 protease in post-germinative growth and maintenance of mitochondrial function in Arabidopsis thaliana

(2008) Stamatis Rigas et al.   NEW PHYTOLOGIST

Mapping Metabolic and Transcript Temporal Switches during Germination in Rice Highlights Specific Transcription Factors and the Role of RNA Instability in the Germination Process

(2008) K. A. Howell et al.   PLANT PHYSIOLOGY

The archaebacterial origin of eukaryotes

(2008) C. J. Cox et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA