Transcriptome characterization of moso bamboo (Phyllostachys edulis) seedlings in response to exogenous gibberellin applications

Effects of Gibberellin and Gibberellin Biosynthesis Inhibitor (Paclobutrazol) Applications on Radish (Raphanus sativus) Taproot Expansion and the Presence of Authentic Hormones

(2017) Bashir Mohammed Omer Jabir   INTERNATIONAL JOURNAL OF AGRICULTURE AND BIOLOGY

Steviol glycosides correlation to genes transcription revealed in gibberellin and paclobutrazol-treated Stevia rebaudiana

(2017) Shokoofeh Hajihashemi et al.   JOURNAL OF PLANT BIOCHEMISTRY AND BIOTECHNOLOGY

Light Regulation of Alternative Pre-mRNA Splicing in Plants

(2017) Hangxiao Zhang et al.   PHOTOCHEMISTRY AND PHOTOBIOLOGY

Hormone Distribution and Transcriptome Profiles in Bamboo Shoots Provide Insights on Bamboo Stem Emergence and Growth

(2017) Rico Gamuyao et al.   PLANT AND CELL PHYSIOLOGY

Comprehensive profiling of rhizome-associated alternative splicing and alternative polyadenylation in moso bamboo (Phyllostachys edulis )

(2017) Taotao Wang et al.   PLANT JOURNAL

UV-B Inhibits Leaf Growth through Changes in Growth Regulating Factors and Gibberellin Levels

(2017) Julieta Fina et al.   PLANT PHYSIOLOGY

Biological functions of natural antisense transcripts

(2016) Wojciech Rosikiewicz et al.   ACTA BIOCHIMICA POLONICA

Information Integration and Communication in Plant Growth Regulation

(2016) Juthamas Chaiwanon et al.   CELL

Population genomic analysis of gibberellin-responsive long non-coding RNAs inPopulus

(2016) Jiaxing Tian et al.   JOURNAL OF EXPERIMENTAL BOTANY

Association genetics and transcriptome analysis reveal a gibberellin-responsive pathway involved in regulating photosynthesis

(2016) Jianbo Xie et al.   JOURNAL OF EXPERIMENTAL BOTANY

Genome-wide analysis of shoot growth-associated alternative splicing in moso bamboo

(2016) Long Li et al.   MOLECULAR GENETICS AND GENOMICS

Exploring key cellular processes and candidate genes regulating the primary thickening growth of Moso underground shoots

(2016) Qiang Wei et al.   NEW PHYTOLOGIST

Exogenous gibberellin altered morphology, anatomic and transcriptional regulatory networks of hormones in carrot root and shoot

(2015) Guang-Long Wang et al.   BMC PLANT BIOLOGY

Endogenous hormonal equilibrium linked to bamboo culm development

(2015) H.Y. Wang et al.   GENETICS AND MOLECULAR RESEARCH

Current Understanding of the Interplay between Phytohormones and Photosynthesis under Environmental Stress

(2015) Mayank Gururani et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Abiotic stress induces change in Cinnamoyl CoA Reductase (CCR) protein abundance and lignin deposition in developing seedlings of Leucaena leucocephala

(2015) Sameer Srivastava et al.   PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS

The brassinosteroid signaling network — a paradigm of signal integration

(2014) Wenfei Wang et al.   CURRENT OPINION IN PLANT BIOLOGY

Genome-wide identification of long noncoding natural antisense transcripts and their responses to light in Arabidopsis

(2014) H. Wang et al.   GENOME RESEARCH

MiR397b regulates both lignin content and seed number in Arabidopsis via modulating a laccase involved in lignin biosynthesis

(2014) Cong-Ying Wang et al.   PLANT BIOTECHNOLOGY JOURNAL

rMATS: Robust and flexible detection of differential alternative splicing from replicate RNA-Seq data

(2014) Shihao Shen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Reduced lignin content and altered lignin composition in the warm season forage grass Paspalum dilatatum by down-regulation of a Cinnamoyl CoA Reductase Gene

(2014) Andrea Giordano et al.   TRANSGENIC RESEARCH

Next-generation sequencing-based mRNA and microRNA expression profiling analysis revealed pathways involved in the rapid growth of developing culms in Moso bamboo

(2013) Cai-yun He et al.   BMC PLANT BIOLOGY

The functions of natural antisense transcripts

(2013) Megan Wight et al.   Essays in Biochemistry

Lodging resistance of winter wheat (Triticum aestivum L.): Lignin accumulation and its related enzymes activities due to the application of paclobutrazol or gibberellin acid

(2013) Dianliang Peng et al.   FIELD CROPS RESEARCH

The draft genome of the fast-growing non-timber forest species moso bamboo (Phyllostachys heterocycla)

(2013) Zhenhua Peng et al.   NATURE GENETICS

Utilizing sequence intrinsic composition to classify protein-coding and long non-coding transcripts

(2013) Liang Sun et al.   NUCLEIC ACIDS RESEARCH

The Regulatory Properties of Rubisco Activase Differ among Species and Affect Photosynthetic Induction during Light Transitions

(2013) A. E. Carmo-Silva et al.   PLANT PHYSIOLOGY

Gibberellins and DELLAs: central nodes in growth regulatory networks

(2013) Hannes Claeys et al.   TRENDS IN PLANT SCIENCE

KNOX1 genes regulate lignin deposition and composition in monocots and dicots

(2013) Brad T. Townsley et al.   Frontiers in Plant Science

Gibberellin biosynthesis and its regulation

(2012) Peter Hedden et al.   BIOCHEMICAL JOURNAL

ATAD3, a vital membrane bound mitochondrial ATPase involved in tumor progression

(2012) Shuijie Li et al.   JOURNAL OF BIOENERGETICS AND BIOMEMBRANES

Temporal and Spatial Profiling of Internode Elongation-Associated Protein Expression in Rapidly Growing Culms of Bamboo

(2012) Kai Cui et al.   JOURNAL OF PROTEOME RESEARCH

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

(2012) Cole Trapnell et al.   Nature Protocols

Evolutionary Dynamics of Gene and Isoform Regulation in Mammalian Tissues

(2012) J. Merkin et al.   SCIENCE

The Evolutionary Landscape of Alternative Splicing in Vertebrate Species

(2012) N. L. Barbosa-Morais et al.   SCIENCE

Cell wall structure and formation of maturing fibres of moso bamboo (Phyllostachys pubescens) increase buckling resistance

(2011) X. Wang et al.   Journal of the Royal Society Interface

Disruption of LACCASE4 and 17 Results in Tissue-Specific Alterations to Lignification of Arabidopsis thaliana Stems

(2011) S. Berthet et al.   PLANT CELL

Plant hormone signaling lightens up: integrators of light and hormones

(2010) On Sun Lau et al.   CURRENT OPINION IN PLANT BIOLOGY

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

(2010) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

AHD2.0: an update version of Arabidopsis Hormone Database for plant systematic studies

(2010) Z. Jiang et al.   NUCLEIC ACIDS RESEARCH

PIFs: pivotal components in a cellular signaling hub

(2010) Pablo Leivar et al.   TRENDS IN PLANT SCIENCE

DEGseq: an R package for identifying differentially expressed genes from RNA-seq data

(2009) Likun Wang et al.   BIOINFORMATICS

TopHat: discovering splice junctions with RNA-Seq

(2009) Cole Trapnell et al.   BIOINFORMATICS

Thermoperiodic growth control by gibberellin does not involve changes in photosynthetic or respiratory capacities in pea

(2009) Jon Anders Stavang et al.   JOURNAL OF EXPERIMENTAL BOTANY

Cold-induced silencing by long antisense transcripts of an Arabidopsis Polycomb target

(2009) Szymon Swiezewski et al.   NATURE

InParanoid 7: new algorithms and tools for eukaryotic orthology analysis

(2009) G. Ostlund et al.   NUCLEIC ACIDS RESEARCH

MYB58 and MYB63 Are Transcriptional Activators of the Lignin Biosynthetic Pathway during Secondary Cell Wall Formation in Arabidopsis

(2009) J. Zhou et al.   PLANT CELL

Phosphoproteomic analysis of ethylene-regulated protein phosphorylation in etiolated seedlings of Arabidopsis mutant ein2 using two-dimensional separations coupled with a hybrid quadrupole time-of-flight mass spectrometer

(2009) Hao Li et al.   PROTEOMICS

Genome-wide identification and analysis of small RNAs originated from natural antisense transcripts in Oryza sativa

(2008) X. Zhou et al.   GENOME RESEARCH

MicroRNA-mediated Systemic Down-regulation of Copper Protein Expression in Response to Low Copper Availability inArabidopsis

(2008) Salah E. Abdel-Ghany et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

SOMNUS, a CCCH-Type Zinc Finger Protein in Arabidopsis, Negatively Regulates Light-Dependent Seed Germination Downstream of PIL5

(2008) D. H. Kim et al.   PLANT CELL