Hormone Distribution and Transcriptome Profiles in Bamboo Shoots Provide Insights on Bamboo Stem Emergence and Growth

The floral transcriptomes of four bamboo species (Bambusoideae; Poaceae): support for common ancestry among woody bamboos

(2016) William P. Wysocki et al.   BMC GENOMICS

Plant hormone-mediated regulation of stress responses

(2016) Vivek Verma et al.   BMC PLANT BIOLOGY

A proteomic and genetic analysis of the Neurospora crassa conidia cell wall proteins identifies two glycosyl hydrolases involved in cell wall remodeling

(2016) Jie Ao et al.   FUNGAL GENETICS AND BIOLOGY

Maize Homologs of CCoAOMT and HCT, Two Key Enzymes in Lignin Biosynthesis, Form Complexes with the NLR Rp1 Protein to Modulate the Defense Response

(2016) Guan-Feng Wang et al.   PLANT PHYSIOLOGY

Transcriptome Sequencing and Analysis for Culm Elongation of the World’s Largest Bamboo (Dendrocalamus sinicus)

(2016) Kai Cui et al.   PLoS One

Dynamic allocation and transfer of non-structural carbohydrates, a possible mechanism for the explosive growth of Moso bamboo (Phyllostachys heterocycla)

(2016) Xinzhang Song et al.   Scientific Reports

Q&A: How do plants respond to cytokinins and what is their importance?

(2015) Asami Osugi et al.   BMC BIOLOGY

Major Chemical Constituents of Bamboo Shoots (Phyllostachys pubescens): Qualitative and Quantitative Research

(2015) Jia Sun et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

A Century of Gibberellin Research

(2015) Peter Hedden et al.   JOURNAL OF PLANT GROWTH REGULATION

Overexpression of Plastid Transketolase in Tobacco Results in a Thiamine Auxotrophic Phenotype

(2015) Mahdi Khozaei et al.   PLANT CELL

A Single Nucleotide Deletion inGibberellin20-oxidase1Causes Alpine Dwarfism in Arabidopsis

(2015) Yonghai Luo et al.   PLANT PHYSIOLOGY

The complex of ASYMMETRIC LEAVES (AS) proteins plays a central role in antagonistic interactions of genes for leaf polarity specification in Arabidopsis

(2015) Chiyoko Machida et al.   Wiley Interdisciplinary Reviews-Developmental Biology

Determination of Hemicellulose, Cellulose and Lignin in Moso Bamboo by Near Infrared Spectroscopy

(2015) Xiaoli Li et al.   Scientific Reports

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

ANGUSTIFOLIA3 Binds to SWI/SNF Chromatin Remodeling Complexes to Regulate Transcription during Arabidopsis Leaf Development

(2014) L. Vercruyssen et al.   PLANT CELL

Characterization of the Floral Transcriptome of Moso Bamboo (Phyllostachys edulis) at Different Flowering Developmental Stages by Transcriptome Sequencing and RNA-Seq Analysis

(2014) Jian Gao et al.   PLoS One

QTL analysis of internode elongation in response to gibberellin in deepwater rice

(2014) K. Nagai et al.   AoB Plants

How do expansins control plant growth? A model for cell wall loosening via defect migration in cellulose microfibrils

(2013) Andrei Lipchinsky   ACTA PHYSIOLOGIAE PLANTARUM

Can’t See the (Bamboo) Forest for the Trees: Examining Bamboo’s Fit Within International Forestry Institutions

(2013) Kathleen Carmel Buckingham et al.   AMBIO

Model-based clustering for RNA-seq data

(2013) Yaqing Si et al.   BIOINFORMATICS

Transcriptional programming during cell wall maturation in the expanding Arabidopsis stem

(2013) Hardy Hall et al.   BMC PLANT BIOLOGY

Next-generation sequencing-based mRNA and microRNA expression profiling analysis revealed pathways involved in the rapid growth of developing culms in Moso bamboo

(2013) Cai-yun He et al.   BMC PLANT BIOLOGY

ATML1 promotes epidermal cell differentiation in Arabidopsis shoots

(2013) S. Takada et al.   DEVELOPMENT

Arabidopsis homeodomain-leucine zipper IV proteins promote stomatal development and ectopically induce stomata beyond the epidermis

(2013) K. M. Peterson et al.   DEVELOPMENT

Chemical Composition and Immunohistological Variations of a Growing Bamboo Shoot

(2013) Wan-Jung Chang et al.   JOURNAL OF WOOD CHEMISTRY AND TECHNOLOGY

Higher level phylogenetic relationships within the bamboos (Poaceae: Bambusoideae) based on five plastid markers

(2013) Scot A. Kelchner   MOLECULAR PHYLOGENETICS AND EVOLUTION

APETALA2/Ethylene Responsive Factor (AP2/ERF) transcription factors: mediators of stress responses and developmental programs

(2013) Francesco Licausi et al.   NEW PHYTOLOGIST

Mutations in epidermis-specific HD-ZIP IV genes affect floral organ identity inArabidopsis thaliana

(2013) Naoko Kamata et al.   PLANT JOURNAL

Transcriptome Sequencing and Analysis of the Fast Growing Shoots of Moso Bamboo (Phyllostachys edulis)

(2013) Zhenhua Peng et al.   PLoS One

The Arabidopsis IDD14, IDD15, and IDD16 Cooperatively Regulate Lateral Organ Morphogenesis and Gravitropism by Promoting Auxin Biosynthesis and Transport

(2013) Dayong Cui et al.   PLoS Genetics

TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

(2013) Daehwan Kim et al.   GENOME BIOLOGY

Gibberellin biosynthesis and its regulation

(2012) Peter Hedden et al.   BIOCHEMICAL JOURNAL

Temporal and Spatial Profiling of Internode Elongation-Associated Protein Expression in Rapidly Growing Culms of Bamboo

(2012) Kai Cui et al.   JOURNAL OF PROTEOME RESEARCH

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

The genetic basis of flowering responses to seasonal cues

(2012) Fernando Andrés et al.   NATURE REVIEWS GENETICS

Ectopic expression of the Arabidopsis ASYMMETRIC LEAVES2-LIKE5 (ASL5) gene in cockscomb (Celosia cristata) generates vascular-pattern modifications in lateral organs

(2012) Xudong Sun et al.   PLANT CELL TISSUE AND ORGAN CULTURE

De Novo Sequencing and Characterization of the Floral Transcriptome of Dendrocalamus latiflorus (Poaceae: Bambusoideae)

(2012) Xue-Mei Zhang et al.   PLoS One

Arabidopsis thaliana PECP1 — Enzymatic characterization and structural organization of the first plant phosphoethanolamine/phosphocholine phosphatase

(2011) Anett May et al.   BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS

Dynamics of Carbon Accumulation During the Fast Growth Period of Bamboo Plant

(2011) Yong Xu et al.   BOTANICAL REVIEW

Organogenesis from stem cells in planta: multiple feedback loops integrating molecular and mechanical signals

(2011) Fabrice Besnard et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

FT, A Mobile Developmental Signal in Plants

(2011) Philip A. Wigge   CURRENT BIOLOGY

The AP2/ERF Transcription Factor WIND1 Controls Cell Dedifferentiation in Arabidopsis

(2011) Akira Iwase et al.   CURRENT BIOLOGY

Salicylic acid beyond defence: its role in plant growth and development

(2011) M. Rivas-San Vicente et al.   JOURNAL OF EXPERIMENTAL BOTANY

Lignin metabolism has a central role in the resistance of cotton to the wilt fungus Verticillium dahliae as revealed by RNA-Seq-dependent transcriptional analysis and histochemistry

(2011) Li Xu et al.   JOURNAL OF EXPERIMENTAL BOTANY

Control of flowering and storage organ formation in potato by FLOWERING LOCUS T

(2011) Cristina Navarro et al.   NATURE

Functional Analysis of All AGAMOUS Subfamily Members in Rice Reveals Their Roles in Reproductive Organ Identity Determination and Meristem Determinacy

(2011) Ludovico Dreni et al.   PLANT CELL

Transcriptional networks for lignin biosynthesis: more complex than we thought?

(2011) Qiao Zhao et al.   TRENDS IN PLANT SCIENCE

SCHIZORIZA Encodes a Nuclear Factor Regulating Asymmetry of Stem Cell Divisions in the Arabidopsis Root

(2010) Colette A. ten Hove et al.   CURRENT BIOLOGY

Streptococcus pyogenesSer/Thr Kinase-regulated Cell Wall Hydrolase Is a Cell Division Plane-recognizing and Chain-forming Virulence Factor

(2010) Vijay Pancholi et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Identification and functional analysis of the MOC1 interacting protein 1

(2010) Fengli Sun et al.   Journal of Genetics and Genomics

Analysis of the cellulose synthase genes associated with primary cell wall synthesis in Bambusa oldhamii

(2010) Chih-Yu Chen et al.   PHYTOCHEMISTRY

TCP Transcription Factors Regulate the Activities of ASYMMETRIC LEAVES1 and miR164, as Well as the Auxin Response, during Differentiation of Leaves in Arabidopsis

(2010) T. Koyama et al.   PLANT CELL

The Arabidopsis defense component EDM2 affects the floral transition in an FLC-dependent manner

(2010) Tokuji Tsuchiya et al.   PLANT JOURNAL

Identification of Differentially Expressed Sequence Tags in Rapidly Elongating Phyllostachys pubescens Internodes by Suppressive Subtractive Hybridization

(2010) Ming-bing Zhou et al.   PLANT MOLECULAR BIOLOGY REPORTER

Understanding Lignification: Challenges Beyond Monolignol Biosynthesis

(2010) X. Li et al.   PLANT PHYSIOLOGY

SHORT-ROOT and SCARECROW Regulate Leaf Growth in Arabidopsis by Stimulating S-Phase Progression of the Cell Cycle

(2010) S. Dhondt et al.   PLANT PHYSIOLOGY

Arabinogalactan-Proteins: Key Regulators at the Cell Surface?

(2010) M. Ellis et al.   PLANT PHYSIOLOGY

Update on Mechanisms of Plant Cell Wall Biosynthesis: How Plants Make Cellulose and Other (1->4)- -D-Glycans

(2010) N. C. Carpita   PLANT PHYSIOLOGY

Biosynthesis of Plant Isoprenoids: Perspectives for Microbial Engineering

(2009) James Kirby et al.   Annual Review of Plant Biology

Transcriptomic analysis of Arabidopsis developing stems: a close-up on cell wall genes

(2009) Zoran Minic et al.   BMC PLANT BIOLOGY

Serine/Threonine Phosphatases: Mechanism through Structure

(2009) Yigong Shi   CELL

Two flavonoid glycosides and a phenylpropanoid glucose ester from the leaves ofSterculia foetida

(2009) Peng-Fei Xia et al.   JOURNAL OF ASIAN NATURAL PRODUCTS RESEARCH

Phenylpropanoid Biosynthesis

(2009) Thomas Vogt   Molecular Plant

The ethylene response factors SNORKEL1 and SNORKEL2 allow rice to adapt to deep water

(2009) Yoko Hattori et al.   NATURE

Survival of the flexible: hormonal growth control and adaptation in plant development

(2009) Hanno Wolters et al.   NATURE REVIEWS GENETICS

Enzymes in jasmonate biosynthesis – Structure, function, regulation

(2009) Andreas Schaller et al.   PHYTOCHEMISTRY

Highly Sensitive and High-Throughput Analysis of Plant Hormones Using MS-Probe Modification and Liquid Chromatography–Tandem Mass Spectrometry: An Application for Hormone Profiling in Oryza sativa

(2009) Mikiko Kojima et al.   PLANT AND CELL PHYSIOLOGY

Shoot apical meristem function in Arabidopsis requires the combined activities of three BEL1-like homeodomain proteins

(2009) Bas Rutjens et al.   PLANT JOURNAL

Tyrosine and Phenylalanine Are Synthesized within the Plastids in Arabidopsis

(2009) P. Rippert et al.   PLANT PHYSIOLOGY

Evolution of the B3 DNA Binding Superfamily: New Insights into REM Family Gene Diversification

(2009) Elisson A. C. Romanel et al.   PLoS One

Gene expression profiling and silencing reveal that monolignol biosynthesis plays a critical role in penetration defence in wheat against powdery mildew invasion

(2008) N. H. Bhuiyan et al.   JOURNAL OF EXPERIMENTAL BOTANY

Ehd2, a Rice Ortholog of the Maize INDETERMINATE1 Gene, Promotes Flowering by Up-Regulating Ehd1

(2008) K. Matsubara et al.   PLANT PHYSIOLOGY