DNA methylation and genetic degeneration of the Y chromosome in the dioecious plant Silene latifolia

DNA methylation of retrotransposons, DNA transposons and genes in sugar beet (Beta vulgaris L.)

(2017) Falk Zakrzewski et al.   PLANT JOURNAL

Optimized reduced representation bisulfite sequencing reveals tissue-specific mCHH islands in maize

(2017) Fei-Man Hsu et al.   Epigenetics & Chromatin

Chromosome Evolution in Connection with Repetitive Sequences and Epigenetics in Plants

(2017) Shu-Fen Li et al.   Genes

Impact of Repetitive Elements on the Y Chromosome Formation in Plants

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Sexual epigenetics: gender-specific methylation of a gene in the sex determining region of Populus balsamifera

(2017) Katharina Bräutigam et al.   Scientific Reports

The First Rule of Plant Transposable Element Silencing: Location, Location, Location

(2016) Meredith J. Sigman et al.   PLANT CELL

Repetitive sequences and epigenetic modification: inseparable partners play important roles in the evolution of plant sex chromosomes

(2016) Shu-Fen Li et al.   PLANTA

A new physical mapping approach refines the sex-determining gene positions on the Silene latifolia Y-chromosome

(2016) Yusuke Kazama et al.   Scientific Reports

Identifying new sex-linked genes through BAC sequencing in the dioecious plant Silene latifolia

(2015) N Blavet et al.   BMC GENOMICS

Impact of repetitive DNA on sex chromosome evolution in plants

(2015) Roman Hobza et al.   CHROMOSOME RESEARCH

RNA-directed DNA methylation enforces boundaries between heterochromatin and euchromatin in the maize genome

(2015) Qing Li et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Rapid Y degeneration and dosage compensation in plant sex chromosomes

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Possible mechanisms responsible for absence of a retrotransposon family on a plant Y chromosome

(2014) Zdenek Kubat et al.   NEW PHYTOLOGIST

Independent Evolution of Transcriptional Inactivation on Sex Chromosomes in Birds and Mammals

(2013) Alexandra M. Livernois et al.   PLoS Genetics

Comparative analysis of a plant pseudoautosomal region (PAR) in Silene latifolia with the corresponding S. vulgaris autosome

(2012) Nicolas Blavet et al.   BMC GENOMICS

CHH islands: de novo DNA methylation in near-gene chromatin regulation in maize

(2012) J. I. Gent et al.   GENOME RESEARCH

Plant sex chromosome evolution

(2012) Deborah Charlesworth   JOURNAL OF EXPERIMENTAL BOTANY

Bisprimer—A Program for the Design of Primers for Bisulfite-Based Genomic Sequencing of Both Plant and Mammalian DNA Samples

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Plant Y Chromosome Degeneration Is Retarded by Haploid Purifying Selection

(2011) Margarita V. Chibalina et al.   CURRENT BIOLOGY

Structure and evolution of Apetala3, a sex-linked gene in Silene latifolia

(2010) Radim Cegan et al.   BMC PLANT BIOLOGY

Conservation and divergence of methylation patterning in plants and animals

(2010) S. Feng et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genome-Wide Evolutionary Analysis of Eukaryotic DNA Methylation

(2010) A. Zemach et al.   SCIENCE

Amplification efficiency: linking baseline and bias in the analysis of quantitative PCR data

(2009) J. M. Ruijter et al.   NUCLEIC ACIDS RESEARCH

Kismeth: Analyzer of plant methylation states through bisulfite sequencing

(2008) Eyal Gruntman et al.   BMC BIOINFORMATICS

Survey of repetitive sequences in Silene latifolia with respect to their distribution on sex chromosomes

(2008) Tomas Cermak et al.   CHROMOSOME RESEARCH

Evidence for Degeneration of the Y Chromosome in the Dioecious Plant Silene latifolia

(2008) Gabriel A.B. Marais et al.   CURRENT BIOLOGY

DNA methylation and heterochromatinization in the male-specific region of the primitive Y chromosome of papaya

(2008) W. Zhang et al.   GENOME RESEARCH

Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning

(2008) Shawn J. Cokus et al.   NATURE