DNA methylation of retrotransposons, DNA transposons and genes in sugar beet (Beta vulgaris L.)
Published 2017 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
DNA methylation of retrotransposons, DNA transposons and genes in sugar beet (Beta vulgaris
L.)
Authors
Keywords
-
Journal
PLANT JOURNAL
Volume 90, Issue 6, Pages 1156-1175
Publisher
Wiley
Online
2017-03-03
DOI
10.1111/tpj.13526
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Repeat Composition of CenH3-chromatin and H3K9me2-marked heterochromatin in Sugar Beet (Beta vulgaris)
- (2016) Teresa Kowar et al. BMC PLANT BIOLOGY
- Short interspersed nuclear elements (SINEs) are abundant in Solanaceae and have a family-specific impact on gene structure and genome organization
- (2016) Kathrin M. Seibt et al. PLANT JOURNAL
- Diversification, evolution and methylation of short interspersed nuclear element families in sugar beet and related Amaranthaceae species
- (2016) Katrin Schwichtenberg et al. PLANT JOURNAL
- Mutational Cooperativity Linked to Combinatorial Epigenetic Gain of Function in Acute Myeloid Leukemia
- (2015) Alan H. Shih et al. CANCER CELL
- Gender-specific postnatal demethylation and establishment of epigenetic memory
- (2015) Yitzhak Reizel et al. GENES & DEVELOPMENT
- Single-molecule sequencing of the desiccation-tolerant grass Oropetium thomaeum
- (2015) Robert VanBuren et al. NATURE
- Loss of Karma transposon methylation underlies the mantled somaclonal variant of oil palm
- (2015) Meilina Ong-Abdullah et al. NATURE
- Stable oncogenic silencing in vivo by programmable and targeted de novo DNA methylation in breast cancer
- (2015) S Stolzenburg et al. ONCOGENE
- Competency for shoot regeneration from Arabidopsis root explants is regulated by DNA methylation
- (2015) Or Shemer et al. PLANT SCIENCE
- Cytosine Methylation of an Ancient Satellite Family in the Wild Beet Beta procumbens
- (2014) Martin Schmidt et al. CYTOGENETIC AND GENOME RESEARCH
- Consistent and Heritable Alterations of DNA Methylation Are Induced by Tissue Culture in Maize
- (2014) Scott C. Stelpflug et al. GENETICS
- Profiling of extensively diversified plant LINEs reveals distinct plant-specific subclades
- (2014) Tony Heitkam et al. PLANT JOURNAL
- The CHH motif in sugar beet satellite DNA: a modulator for cytosine methylation
- (2014) Falk Zakrzewski et al. PLANT JOURNAL
- Methylated DNA is over-represented in whole-genome bisulfite sequencing data
- (2014) Lexiang Ji et al. Frontiers in Genetics
- Plant genome sequencing — applications for crop improvement
- (2013) Marie E Bolger et al. CURRENT OPINION IN BIOTECHNOLOGY
- The genome of the recently domesticated crop plant sugar beet (Beta vulgaris)
- (2013) Juliane C. Dohm et al. NATURE
- Single-base resolution methylomes of tomato fruit development reveal epigenome modifications associated with ripening
- (2013) Silin Zhong et al. NATURE BIOTECHNOLOGY
- Non-CG methylation patterns shape the epigenetic landscape in Arabidopsis
- (2013) Hume Stroud et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Extensive Natural Epigenetic Variation at a De Novo Originated Gene
- (2013) Amanda Bortolini Silveira et al. PLoS Genetics
- Plants regenerated from tissue culture contain stable epigenome changes in rice
- (2013) Hume Stroud et al. eLife
- Highly diverse chromoviruses of Beta vulgaris are classified by chromodomains and chromosomal integration
- (2013) Beatrice Weber et al. Mobile DNA
- Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data
- (2012) M. Kearse et al. BIOINFORMATICS
- Single-base resolution maps of cultivated and wild rice methylomes and regulatory roles of DNA methylation in plant gene expression
- (2012) Xin Li et al. BMC GENOMICS
- Reprogramming of DNA Methylation in Pollen Guides Epigenetic Inheritance via Small RNA
- (2012) Joseph P. Calarco et al. CELL
- CHH islands: de novo DNA methylation in near-gene chromatin regulation in maize
- (2012) J. I. Gent et al. GENOME RESEARCH
- Targeted Methylation and Gene Silencing of VEGF-A in Human Cells by Using a Designed Dnmt3a–Dnmt3L Single-Chain Fusion Protein with Increased DNA Methylation Activity
- (2012) Abu Nasar Siddique et al. JOURNAL OF MOLECULAR BIOLOGY
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- Functions of DNA methylation: islands, start sites, gene bodies and beyond
- (2012) Peter A. Jones NATURE REVIEWS GENETICS
- How important are transposons for plant evolution?
- (2012) Damon Lisch NATURE REVIEWS GENETICS
- Epigenetic Editing: targeted rewriting of epigenetic marks to modulate expression of selected target genes
- (2012) M. L. de Groote et al. NUCLEIC ACIDS RESEARCH
- DNA Methylation in Plants: Relationship to Small RNAs and Histone Modifications, and Functions in Transposon Inactivation
- (2012) H. Saze et al. PLANT AND CELL PHYSIOLOGY
- Identification and Characterization of an Epi-Allele of FIE1 Reveals a Regulatory Linkage between Two Epigenetic Marks in Rice
- (2012) L. Zhang et al. PLANT CELL
- A sugar beet (Beta vulgarisL.) reference FISH karyotype for chromosome and chromosome-arm identification, integration of genetic linkage groups and analysis of major repeat family distribution
- (2012) Susanne Paesold et al. PLANT JOURNAL
- Evolutionary reshuffling in the Errantivirus lineage Elbe within theBeta vulgarisgenome
- (2012) Cora Wollrab et al. PLANT JOURNAL
- Survey of sugar beet (Beta vulgaris L.) hAT transposons and MITE-like hATpin derivatives
- (2012) Gerhard Menzel et al. PLANT MOLECULAR BIOLOGY
- Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications
- (2011) Felix Krueger et al. BIOINFORMATICS
- Epigenetic profiling of heterochromatic satellite DNA
- (2011) Falk Zakrzewski et al. CHROMOSOMA
- Regeneration in plants and animals: dedifferentiation, transdifferentiation, or just differentiation?
- (2011) Kaoru Sugimoto et al. TRENDS IN CELL BIOLOGY
- Analysis of a c0t-1 library enables the targeted identification of minisatellite and satellite families in Beta vulgaris
- (2010) Falk Zakrzewski et al. BMC PLANT BIOLOGY
- Establishing, maintaining and modifying DNA methylation patterns in plants and animals
- (2010) Julie A. Law et al. NATURE REVIEWS GENETICS
- Conservation and divergence of methylation patterning in plants and animals
- (2010) S. Feng et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Genome-Wide Evolutionary Analysis of Eukaryotic DNA Methylation
- (2010) A. Zemach et al. SCIENCE
- Nested Ty3-gypsy retrotransposons of a single Beta procumbens centromere contain a putative chromodomain
- (2009) Beatrice Weber et al. CHROMOSOME RESEARCH
- The Ty1-copia families SALIRE and Cotzilla populating the Beta vulgaris genome show remarkable differences in abundance, chromosomal distribution, and age
- (2009) Beatrice Weber et al. CHROMOSOME RESEARCH
- Linking DNA methylation and histone modification: patterns and paradigms
- (2009) Howard Cedar et al. NATURE REVIEWS GENETICS
- An abundant and heavily truncated non-LTR retrotransposon (LINE) family in Beta vulgaris
- (2009) Torsten Wenke et al. PLANT MOLECULAR BIOLOGY
- Genome-Wide Demethylation of Arabidopsis Endosperm
- (2009) T.-F. Hsieh et al. SCIENCE
- Assessing the Impact of Transgenerational Epigenetic Variation on Complex Traits
- (2009) Frank Johannes et al. PLoS Genetics
- Epigenetic Regulation of Transposable Elements in Plants
- (2008) Damon Lisch Annual Review of Plant Biology
- Highly Integrated Single-Base Resolution Maps of the Epigenome in Arabidopsis
- (2008) Ryan Lister et al. CELL
- Epigenetic regulation of heterochromatic DNA stability
- (2008) Jamy C Peng et al. CURRENT OPINION IN GENETICS & DEVELOPMENT
- Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning
- (2008) Shawn J. Cokus et al. NATURE
- Tissue dependent variations of DNA methylation and endoreduplication levels during tomato fruit development and ripening
- (2008) E. Teyssier et al. PLANTA
- Epigenomic Consequences of Immortalized Plant Cell Suspension Culture
- (2008) Milos Tanurdzic et al. PLOS BIOLOGY
Find the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
SearchAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started