Understanding the tolerance of the industrial yeast Saccharomyces cerevisiae against a major class of toxic aldehyde compounds

Signature pathway expression of xylose utilization in the genetically engineered industrial yeast Saccharomyces cerevisiae

(2018) Quanzhou Feng et al.   PLoS One

Phenotypic characterization and comparative transcriptomics of evolved Saccharomyces cerevisiae strains with improved tolerance to lignocellulosic derived inhibitors

(2016) Olivia A. Thompson et al.   Biotechnology for Biofuels

Identification and detoxification of glycolaldehyde, an unattended bioethanol fermentation inhibitor

(2016) Lahiru N. Jayakody et al.   CRITICAL REVIEWS IN BIOTECHNOLOGY

Xylose fermentation efficiency and inhibitor tolerance of the recombinant industrial Saccharomyces cerevisiae strain NAPX37

(2015) Yun-Cheng Li et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Contribution of PRS3, RPB4 and ZWF1 to the resistance of industrial Saccharomyces cerevisiae CCUG53310 and PE-2 strains to lignocellulosic hydrolysate-derived inhibitors

(2015) Joana T. Cunha et al.   BIORESOURCE TECHNOLOGY

Transcriptome analysis of Zymomonas mobilis ZM4 reveals mechanisms of tolerance and detoxification of phenolic aldehyde inhibitors from lignocellulose pretreatment

(2015) Xia Yi et al.   Biotechnology for Biofuels

Identification of furfural resistant strains of Saccharomyces cerevisiae and Saccharomyces paradoxus from a collection of environmental and industrial isolates

(2015) Sarah J Field et al.   Biotechnology for Biofuels

ChiNet uncovers rewired transcription subnetworks in tolerant yeast for advanced biofuels conversion

(2015) Yang Zhang et al.   NUCLEIC ACIDS RESEARCH

Direct enzyme assay evidence confirms aldehyde reductase function of Ydr541cp and Ygl039wp fromSaccharomyces cerevisiae

(2015) Jaewoong Moon et al.   YEAST

Industrial robust yeast isolates with great potential for fermentation of lignocellulosic biomass

(2014) Francisco B. Pereira et al.   BIORESOURCE TECHNOLOGY

Simultaneously improving xylose fermentation and tolerance to lignocellulosic inhibitors through evolutionary engineering of recombinant Saccharomyces cerevisiae harbouring xylose isomerase

(2014) Justin Smith et al.   BMC BIOTECHNOLOGY

Transcription analysis of recombinant industrial and laboratory Saccharomyces cerevisiae strains reveals the molecular basis for fermentation of glucose and xylose

(2014) Akinori Matsushika et al.   Microbial Cell Factories

Engineering redox balance through cofactor systems

(2014) Xiulai Chen et al.   TRENDS IN BIOTECHNOLOGY

Genomic and transcriptome analyses reveal that MAPK- and phosphatidylinositol-signaling pathways mediate tolerance to 5-hydroxymethyl-2-furaldehyde for industrial yeast Saccharomyces cerevisiae

(2014) Qian Zhou et al.   Scientific Reports

Stress tolerance and growth physiology of yeast strains from the Brazilian fuel ethanol industry

(2013) B. E. Della-Bianca et al.   ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

5-Hydroxymethylfurfural induces ADH7 and ARI1 expression in tolerant industrial Saccharomyces cerevisiae strain P6H9 during bioethanol production

(2013) Nicole Teixeira Sehnem et al.   BIORESOURCE TECHNOLOGY

Adaptive evolution of an industrial strain of Saccharomyces cerevisiae for combined tolerance to inhibitors and temperature

(2013) Valeria Wallace-Salinas et al.   Biotechnology for Biofuels

Engineering glutathione biosynthesis of Saccharomyces cerevisiae increases robustness to inhibitors in pretreated lignocellulosic materials

(2013) Magnus Ask et al.   Microbial Cell Factories

Metabolomic Analysis Reveals Key Metabolites Related to the Rapid Adaptation of Saccharomyce cerevisiae to Multiple Inhibitors of Furfural, Acetic Acid, and Phenol

(2013) Xin Wang et al.   OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY

Systematic measurement of transcription factor-DNA interactions by targeted mass spectrometry identifies candidate gene regulatory proteins

(2013) Hamid Mirzaei et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Improvement of tolerance of Saccharomyces cerevisiae to hot-compressed water-treated cellulose by expression of ADH1

(2012) Lahiru N. Jayakody et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Genetic Engineering of Inhibitor-Tolerant Saccharomyces cerevisiae for Improved Xylose Utilization in Ethanol Production

(2012) Menggen Ma et al.   BioEnergy Research

Pretreatment and Lignocellulosic Chemistry

(2012) Fan Hu et al.   BioEnergy Research

Evolutionary engineering strategies to enhance tolerance of xylose utilizing recombinant yeast to inhibitors derived from spruce biomass

(2012) Rakesh Koppram et al.   Biotechnology for Biofuels

Integrated Phospholipidomics and Transcriptomics Analysis of Saccharomyces cerevisiae with Enhanced Tolerance to a Mixture of Acetic Acid, Furfural, and Phenol

(2012) Jie Yang et al.   OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY

Functional Survey for Heterologous Sugar Transport Proteins, Using Saccharomyces cerevisiae as a Host

(2011) Eric Young et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Molecular mechanisms of yeast tolerance and in situ detoxification of lignocellulose hydrolysates

(2011) Z. Lewis Liu   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Kinetic mechanism of an aldehyde reductase of Saccharomyces cerevisiae that relieves toxicity of furfural and 5-hydroxymethylfurfural

(2011) Douglas B. Jordan et al.   BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS

Engineered NADH-dependent GRE2 from Saccharomyces cerevisiae by directed enzyme evolution enhances HMF reduction using additional cofactor NADPH

(2011) Jaewoong Moon et al.   ENZYME AND MICROBIAL TECHNOLOGY

Saccharomyces Genome Database: the genomics resource of budding yeast

(2011) J. M. Cherry et al.   NUCLEIC ACIDS RESEARCH

Stereochemistry of Furfural Reduction by a Saccharomyces cerevisiae Aldehyde Reductase That Contributes to In Situ Furfural Detoxification

(2010) M. J. Bowman et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Transcriptome shifts in response to furfural and acetic acid in Saccharomyces cerevisiae

(2010) Bing-Zhi Li et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Transcriptional changes associated with ethanol tolerance in Saccharomyces cerevisiae

(2010) Dragana Stanley et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Fermentation of bioenergy crops into ethanol using biological abatement for removal of inhibitors☆

(2010) Nancy N. Nichols et al.   BIORESOURCE TECHNOLOGY

Furfural induces reactive oxygen species accumulation and cellular damage in Saccharomyces cerevisiae

(2010) Sandra A Allen et al.   Biotechnology for Biofuels

Identification of glycolaldehyde as the key inhibitor of bioethanol fermentation by yeast and genome-wide analysis of its toxicity

(2010) Lahiru N. Jayakody et al.   BIOTECHNOLOGY LETTERS

Comparative transcriptome profiling analyses during the lag phase uncover YAP1, PDR1, PDR3, RPN4, and HSF1 as key regulatory genes in genomic adaptation to the lignocellulose derived inhibitor HMF for Saccharomyces cerevisiae

(2010) Menggen Ma et al.   BMC GENOMICS

Biotechnological strategies to overcome inhibitors in lignocellulose hydrolysates for ethanol production: review

(2010) W. Parawira et al.   CRITICAL REVIEWS IN BIOTECHNOLOGY

Transcriptome analysis of differential responses of diploid and haploid yeast to ethanol stress

(2010) Bing-Zhi Li et al.   JOURNAL OF BIOTECHNOLOGY

The Yap family and its role in stress response

(2010) Claudina Rodrigues-Pousada et al.   YEAST

Together we are strong-cell wall integrity sensors in yeasts

(2010) Rosaura Rodicio et al.   YEAST

Comparative Proteomic Analysis of Tolerance and Adaptation of Ethanologenic Saccharomyces cerevisiae to Furfural, a Lignocellulosic Inhibitory Compound

(2009) F.-M. Lin et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Resistance of Saccharomyces cerevisiae to High Concentrations of Furfural Is Based on NADPH-Dependent Reduction by at Least Two Oxireductases

(2009) D. Heer et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Bioethanol production performance of five recombinant strains of laboratory and industrial xylose-fermenting Saccharomyces cerevisiae

(2009) Akinori Matsushika et al.   BIORESOURCE TECHNOLOGY

Stress-tolerance of baker's-yeast (Saccharomyces cerevisiae) cells: stress-protective molecules and genes involved in stress tolerance

(2009) Jun Shima et al.   BIOTECHNOLOGY AND APPLIED BIOCHEMISTRY

A novel NADPH-dependent aldehyde reductase gene from Saccharomyces cerevisiae NRRL Y-12632 involved in the detoxification of aldehyde inhibitors derived from lignocellulosic biomass conversion

(2009) Z. Lewis Liu et al.   GENE

Proteasomal Degradation of Rpn4 in Saccharomyces cerevisiae Is Critical for Cell Viability Under Stressed Conditions

(2009) X. Wang et al.   GENETICS

Genome structure of a Saccharomyces cerevisiae strain widely used in bioethanol production

(2009) J. L. Argueso et al.   GENOME RESEARCH

Discrete dynamical system modelling for gene regulatory networks of 5-hydroxymethylfurfural tolerance for ethanologenic yeast

(2009) M. Song et al.   IET Systems Biology

Application of a master equation for quantitative mRNA analysis using qRT-PCR

(2009) Z. Lewis Liu et al.   JOURNAL OF BIOTECHNOLOGY

Evolutionarily engineered ethanologenic yeast detoxifies lignocellulosic biomass conversion inhibitors by reprogrammed pathways

(2009) Z. Lewis Liu et al.   MOLECULAR GENETICS AND GENOMICS

Overexpression of Saccharomyces cerevisiae transcription factor and multidrug resistance genes conveys enhanced resistance to lignocellulose-derived fermentation inhibitors

(2009) Björn Alriksson et al.   PROCESS BIOCHEMISTRY

Temporal quantitative proteomics of Saccharomyces cerevisiae in response to a nonlethal concentration of furfural

(2009) Feng-Ming Lin et al.   PROTEOMICS

Multiple gene-mediated NAD(P)H-dependent aldehyde reduction is a mechanism of in situ detoxification of furfural and 5-hydroxymethylfurfural by Saccharomyces cerevisiae

(2008) Z. Lewis Liu et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

NADH- vs NADPH-coupled reduction of 5-hydroxymethyl furfural (HMF) and its implications on product distribution in Saccharomyces cerevisiae

(2008) João R. M. Almeida et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Comparative Lipidomics of Four Strains of Saccharomyces cerevisiae Reveals Different Responses to Furfural, Phenol, and Acetic Acid

(2008) Jin-Mei Xia et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Distinct roles for Khd1p in the localization and expression of bud-localized mRNAs in yeast

(2008) Y. Hasegawa et al.   RNA

Acetaldehyde tolerance inSaccharomyces cerevisiaeinvolves the pentose phosphate pathway and oleic acid biosynthesis

(2008) Yoshimi Matsufuji et al.   YEAST

Some Recent Advances in Hydrolysis of Biomass in Hot-Compressed Water and Its Comparisons with Other Hydrolysis Methods†

(2007) Yun Yu et al.   ENERGY & FUELS