Detection of genetic variants between different Polish Landrace and Puławska pigs by means of RNA-seq analysis

Analysis of the Possibility of Improving the Indicators of Pork Quality Through Selection with Particular Consideration of Intramuscular Fat (MF) Content / Analiza możliwości poprawy wskaźników jakości wieprzowiny na drodze selekcji ze szczególnym uwzględnieniem zawartości tłuszczu śródmięśniowego (IMF)

(2018) Mirosław Tyra et al.   Annals of Animal Science

Rhein triggers apoptosis via induction of endoplasmic reticulum stress, caspase-4 and intracellular calcium in primary human hepatic HL-7702 cells

(2016) Arouna KoraMagazi et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

RNA-Sequencing for profiling goat milk transcriptome in colostrum and mature milk

(2016) Alessandra Crisà et al.   BMC Veterinary Research

Postmortem Aging of Beef with a Special Reference to the Dry Aging

(2016) Muhammad I. Khan et al.   Korean Journal for Food Science of Animal Resources

Flexible expressed region analysis for RNA-seq withderfinder

(2016) Leonardo Collado-Torres et al.   NUCLEIC ACIDS RESEARCH

PANTHER version 11: expanded annotation data from Gene Ontology and Reactome pathways, and data analysis tool enhancements

(2016) Huaiyu Mi et al.   NUCLEIC ACIDS RESEARCH

Expression-based GWAS identifies variants, gene interactions and key regulators affecting intramuscular fatty acid content and composition in porcine meat

(2016) Anna Puig-Oliveras et al.   Scientific Reports

Genome-Wide DNA Methylation Study Identifies Significant Epigenomic Changes in Osteoarthritic Subchondral Bone and Similarity to Overlying Cartilage

(2016) Matlock A. Jeffries et al.   Arthritis & Rheumatology

Genome-wide RNA-Seq analysis of breast muscles of two broiler chicken groups differing in shear force

(2015) K. Piórkowska et al.   ANIMAL GENETICS

Exploring transcriptomic diversity in muscle revealed that cellular signaling pathways mainly differentiate five Western porcine breeds

(2015) Magali SanCristobal et al.   BMC GENOMICS

Sequencing and Characterization of Divergent Marbling Levels in the Beef Cattle (Longissimus dorsi Muscle) Transcriptome

(2014) Dong Chen et al.   ASIAN-AUSTRALASIAN JOURNAL OF ANIMAL SCIENCES

Population history and genomic signatures for high-altitude adaptation in Tibetan pigs

(2014) Huashui Ai et al.   BMC GENOMICS

Genome sequencing and analysis of Mangalica, a fatty local pig of Hungary

(2014) János Molnár et al.   BMC GENOMICS

The evolution of genomic imprinting: theories, predictions and empirical tests

(2014) M M Patten et al.   HEREDITY

Association of a new mobile element in predicted promoter region of ATP-binding cassette transporter 12 gene (ABCA12) with pig production traits

(2014) K. Piórkowska et al.   Livestock Science

Association of calpastatin gene polymorphisms and meat quality traits in pig

(2014) K. Ropka-Molik et al.   MEAT SCIENCE

Reliable Identification of Genomic Variants from RNA-Seq Data

(2013) Robert Piskol et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Genome-wide analysis of porcine backfat and intramuscular fat fatty acid composition using high-density genotyping and expression data

(2013) María Muñoz et al.   BMC GENOMICS

Whole-exome sequencing identifies MYO15A mutations as a cause of autosomal recessive nonsyndromic hearing loss in Korean families

(2013) Hae-Mi Woo et al.   BMC Medical Genetics

Polymorphism in the ELOVL6 Gene Is Associated with a Major QTL Effect on Fatty Acid Composition in Pigs

(2013) Jordi Corominas et al.   PLoS One

Development of Strategies for SNP Detection in RNA-Seq Data: Application to Lymphoblastoid Cell Lines and Evaluation Using 1000 Genomes Data

(2013) Emma M. Quinn et al.   PLoS One

STAR: ultrafast universal RNA-seq aligner

(2012) Alexander Dobin et al.   BIOINFORMATICS

The association between polymorphisms of three cathepsins and economically important traits in pigs raised in Poland

(2012) K.L. Piórkowska et al.   Livestock Science

Predicting the Functional Effect of Amino Acid Substitutions and Indels

(2012) Yongwook Choi et al.   PLoS One

Making Muscle Elastic: The Structural Basis of Myomesin Stretching

(2012) Larissa Tskhovrebova et al.   PLOS BIOLOGY

Whole transcriptome sequencing reveals recurrent NOTCH1 mutations in mantle cell lymphoma

(2011) R. Kridel et al.   BLOOD

Investigation on CAST, CAPN1 and CAPN3 porcine gene polymorphisms and expression in relation to post-mortem calpain activity in muscle and meat quality

(2011) G. Gandolfi et al.   MEAT SCIENCE

Progress and Promise of Genome-Wide Association Studies for Human Complex Trait Genetics

(2010) B. E. Stranger et al.   GENETICS

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

(2010) A. McKenna et al.   GENOME RESEARCH

Molecular characterization and association analysis of porcine adipose triglyceride lipase (PNPLA2) gene

(2010) Li He Dai et al.   MOLECULAR BIOLOGY REPORTS

Single nucleotide polymorphisms in several porcine cathepsin genes are associated with growth, carcass, and production traits in Italian Large White pigs1

(2008) V. Russo et al.   JOURNAL OF ANIMAL SCIENCE