Expression-based GWAS identifies variants, gene interactions and key regulators affecting intramuscular fatty acid content and composition in porcine meat

Effects of genetic variants for the swine FABP3, HMGA1, MC4R, IGF2, and FABP4 genes on fatty acid composition

(2015) Joonki Hong et al.   MEAT SCIENCE

The BioMart community portal: an innovative alternative to large, centralized data repositories

(2015) Damian Smedley et al.   NUCLEIC ACIDS RESEARCH

Dietary fats and cardiovascular disease: Putting together the pieces of a complicated puzzle

(2014) George Michas et al.   ATHEROSCLEROSIS

From SNP co-association to RNA co-expression: Novel insights into gene networks for intramuscular fatty acid composition in porcine

(2014) Yuliaxis Ramayo-Caldas et al.   BMC GENOMICS

The WWOX Gene Modulates High-Density Lipoprotein and Lipid Metabolism

(2014) I. Iatan et al.   Circulation-Cardiovascular Genetics

The Mouse Genome Database (MGD): facilitating mouse as a model for human biology and disease

(2014) Janan T. Eppig et al.   NUCLEIC ACIDS RESEARCH

Correction: Differences in Muscle Transcriptome among Pigs Phenotypically Extreme for Fatty Acid Composition

(2014)   PLoS One

A Co-Association Network Analysis of the Genetic Determination of Pig Conformation, Growth and Fatness

(2014) Anna Puig-Oliveras et al.   PLoS One

iRegulon: From a Gene List to a Gene Regulatory Network Using Large Motif and Track Collections

(2014) Rekin's Janky et al.   PLoS Computational Biology

Genome-wide analysis of porcine backfat and intramuscular fat fatty acid composition using high-density genotyping and expression data

(2013) María Muñoz et al.   BMC GENOMICS

DAG Expression: High-Throughput Gene Expression Analysis of Real-Time PCR Data Using Standard Curves for Relative Quantification

(2013) María Ballester et al.   PLoS One

Genome-wide linkage analysis of QTL for growth and body composition employing the PorcineSNP60 BeadChip

(2012) Ana I Fernández et al.   BMC GENETICS

Rho signalling restriction by the RhoGAP Stard13 integrates growth and morphogenesis in the pancreas

(2012) K. M. Petzold et al.   DEVELOPMENT

Mc2 Receptor Knockdown Modulates Differentiation and Lipid Composition in Adipocytes

(2012) M. Betz et al.   HORMONE AND METABOLIC RESEARCH

Genome-wide association study for intramuscular fatty acid composition in an Iberian × Landrace cross1

(2012) Y. Ramayo-Caldas et al.   JOURNAL OF ANIMAL SCIENCE

AMPK regulation of fatty acid metabolism and mitochondrial biogenesis: Implications for obesity

(2012) Hayley M. O’Neill et al.   MOLECULAR AND CELLULAR ENDOCRINOLOGY

Animal QTLdb: an improved database tool for livestock animal QTL/association data dissemination in the post-genome era

(2012) Zhi-Liang Hu et al.   NUCLEIC ACIDS RESEARCH

Strong signatures of selection in the domestic pig genome

(2012) C.-J. Rubin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Nuclear Import of Exogenous FGF1 Requires the ER-Protein LRRC59 and the Importins Kpnα1 and Kpnβ1

(2012) Yan Zhen et al.   TRAFFIC

Sirtuin 1 in lipid metabolism and obesity

(2011) Thaddeus T. Schug et al.   ANNALS OF MEDICINE

Qxpak.5: Old mixed model solutions for new genomics problems

(2011) Miguel Pérez-Enciso et al.   BMC BIOINFORMATICS

AnimalTFDB: a comprehensive animal transcription factor database

(2011) H.-M. Zhang et al.   NUCLEIC ACIDS RESEARCH

Comparative Structural Analysis of Lipid Binding START Domains

(2011) Ann-Gerd Thorsell et al.   PLoS One

Correction: Lactation Defect with Impaired Secretory Activation in AEBP1-Null Mice

(2011) Lei Zhang et al.   PLoS One

Blockade of class IB phosphoinositide-3 kinase ameliorates obesity-induced inflammation and insulin resistance

(2011) N. Kobayashi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Sirtuin-3 (Sirt3) regulates skeletal muscle metabolism and insulin signaling via altered mitochondrial oxidation and reactive oxygen species production

(2011) E. Jing et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Deriving the consequences of genomic variants with the Ensembl API and SNP Effect Predictor

(2010) William McLaren et al.   BIOINFORMATICS

Skeletal muscle gene expression in response to resistance exercise: sex specific regulation

(2010) Dongmei Liu et al.   BMC GENOMICS

The insulin-like growth factor 2 (IGF2) gene intron3-g.3072G>A polymorphism is not the only Sus scrofa chromosome 2p mutation affecting meat production and carcass traits in pigs: Evidence from the effects of a cathepsin D (CTSD) gene polymorphism1

(2010) L. Fontanesi et al.   JOURNAL OF ANIMAL SCIENCE

Pharmacological correction of a defect in PPAR-γ signaling ameliorates disease severity in Cftr-deficient mice

(2010) Gregory S Harmon et al.   NATURE MEDICINE

Evidence against a sexual dimorphism in glucose and fatty acid metabolism in skeletal muscle cultures from age-matched men and post-menopausal women

(2009) A. Rune et al.   Acta Physiologica

A non-synonymous mutation in a conserved site of theMTTPgene is strongly associated with protein activity and fatty acid profile in pigs

(2009) J. Estellé et al.   ANIMAL GENETICS

DLC1 Activation Requires Lipid Interaction through a Polybasic Region Preceding the RhoGAP Domain

(2009) Patrik Erlmann et al.   MOLECULAR BIOLOGY OF THE CELL

Gene Expression Atlas at the European Bioinformatics Institute

(2009) Misha Kapushesky et al.   NUCLEIC ACIDS RESEARCH

Exercise, sex, menstrual cycle phase, and 17β-estradiol influence metabolism-related genes in human skeletal muscle

(2009) Ming-hua H. Fu et al.   PHYSIOLOGICAL GENOMICS

Design of a High Density SNP Genotyping Assay in the Pig Using SNPs Identified and Characterized by Next Generation Sequencing Technology

(2009) Antonio M. Ramos et al.   PLoS One

Role of the conserved oligomeric Golgi (COG) complex in protein glycosylation

(2008) Richard D. Smith et al.   CARBOHYDRATE RESEARCH

A quantitative trait locus genome scan for porcine muscle fiber traits reveals overdominance and epistasis1

(2008) J. Estellé et al.   JOURNAL OF ANIMAL SCIENCE

Revealing the architecture of gene regulation: the promise of eQTL studies

(2008) Yoav Gilad et al.   TRENDS IN GENETICS

Fat deposition, fatty acid composition and meat quality: A review

(2007) J.D. Wood et al.   MEAT SCIENCE