Gene Expression Analysis of Zobellia galactanivorans during the Degradation of Algal Polysaccharides Reveals both Substrate-Specific and Shared Transcriptome-Wide Responses
Published 2017 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Gene Expression Analysis of Zobellia galactanivorans during the Degradation of Algal Polysaccharides Reveals both Substrate-Specific and Shared Transcriptome-Wide Responses
Authors
Keywords
-
Journal
Frontiers in Microbiology
Volume 8, Issue -, Pages -
Publisher
Frontiers Media SA
Online
2017-09-21
DOI
10.3389/fmicb.2017.01808
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Genetic analyses unravel the crucial role of a horizontally acquired alginate lyase for brown algal biomass degradation by Z obellia galactanivorans
- (2017) Yongtao Zhu et al. ENVIRONMENTAL MICROBIOLOGY
- Polysaccharide Utilization Loci: Fueling Microbial Communities
- (2017) Julie M. Grondin et al. JOURNAL OF BACTERIOLOGY
- Complex pectin metabolism by gut bacteria reveals novel catalytic functions
- (2017) Didier Ndeh et al. NATURE
- Characterization of Potential Polysaccharide Utilization Systems in the Marine Bacteroidetes Gramella Flava JLT2011 Using a Multi-Omics Approach
- (2017) Kai Tang et al. Frontiers in Microbiology
- Habitat and taxon as driving forces of carbohydrate catabolism in marine heterotrophic bacteria: example of the model algae-associated bacterium Zobellia galactanivorans DsijT
- (2016) Tristan Barbeyron et al. ENVIRONMENTAL MICROBIOLOGY
- Regulation of infection efficiency in a globally abundant marine Bacteriodetes virus
- (2016) Cristina Howard-Varona et al. ISME Journal
- Complete genome sequence and transcriptomic analysis of a novel marine strain Bacillus weihaiensis reveals the mechanism of brown algae degradation
- (2016) Yueming Zhu et al. Scientific Reports
- Matching the Diversity of Sulfated Biomolecules: Creation of a Classification Database for Sulfatases Reflecting Their Substrate Specificity
- (2016) Tristan Barbeyron et al. PLoS One
- Bacterial community dynamics during polysaccharide degradation at contrasting sites in the Southern and Atlantic Oceans
- (2015) Matthias Wietz et al. ENVIRONMENTAL MICROBIOLOGY
- Continental-scale variation in seaweed host-associated bacterial communities is a function of host condition, not geography
- (2015) Ezequiel M. Marzinelli et al. ENVIRONMENTAL MICROBIOLOGY
- Proteorhodopsin light-enhanced growth linked to vitamin-B1 acquisition in marine Flavobacteria
- (2015) Laura Gómez-Consarnau et al. ISME Journal
- Enzyme-Assisted Preparation of Furcellaran-Like κ-/β-Carrageenan
- (2015) Aurélie Préchoux et al. MARINE BIOTECHNOLOGY
- The Cultivable Surface Microbiota of the Brown Alga Ascophyllum nodosum is Enriched in Macroalgal-Polysaccharide-Degrading Bacteria
- (2015) Marjolaine Martin et al. Frontiers in Microbiology
- Structural and biochemical characterization of the laminarinaseZgLamCGH16fromZobellia galactanivoranssuggests preferred recognition of branched laminarin
- (2015) Aurore Labourel et al. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY
- Putative bacterial interactions from metagenomic knowledge with an integrative systems ecology approach
- (2015) Philippe Bordron et al. MicrobiologyOpen
- A Novel Agarolytic β-Galactosidase Acts on Agarooligosaccharides for Complete Hydrolysis of Agarose into Monomers
- (2014) Chan Hyoung Lee et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Microorganisms living on macroalgae: diversity, interactions, and biotechnological applications
- (2014) Marjolaine Martin et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- Metabolic pathway of 3,6-anhydro-L-galactose in agar-degrading microorganisms
- (2014) Sun Bok Lee et al. BIOTECHNOLOGY AND BIOPROCESS ENGINEERING
- The novel catabolic pathway of 3,6-anhydro-L-galactose, the main component of red macroalgae, in a marine bacterium
- (2014) Eun Ju Yun et al. ENVIRONMENTAL MICROBIOLOGY
- UpSet: Visualization of Intersecting Sets
- (2014) Alexander Lex et al. IEEE TRANSACTIONS ON VISUALIZATION AND COMPUTER GRAPHICS
- Niches of two polysaccharide-degrading Polaribacter isolates from the North Sea during a spring diatom bloom
- (2014) Peng Xing et al. ISME Journal
- Transcriptional Regulation of the Vanillate Utilization Genes (vanABKOperon) of Corynebacterium glutamicum by VanR, a PadR-Like Repressor
- (2014) Kambiz Morabbi Heravi et al. JOURNAL OF BACTERIOLOGY
- Characterization of a Novel β-l-Arabinofuranosidase inBifidobacterium longum
- (2014) Kiyotaka Fujita et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Master recyclers: features and functions of bacteria associated with phytoplankton blooms
- (2014) Alison Buchan et al. NATURE REVIEWS MICROBIOLOGY
- Planctomycetes and macroalgae, a striking association
- (2014) Olga M. Lage et al. Frontiers in Microbiology
- The Genome of the Alga-Associated Marine Flavobacterium Formosa agariphila KMM 3901TReveals a Broad Potential for Degradation of Algal Polysaccharides
- (2013) Alexander J. Mann et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- The β-GlucanaseZgLamA fromZobellia galactanivoransEvolved a Bent Active Site Adapted for Efficient Degradation of Algal Laminarin
- (2013) Aurore Labourel et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Comparative Characterization of Two Marine Alginate Lyases fromZobellia galactanivoransReveals Distinct Modes of Action and Exquisite Adaptation to Their Natural Substrate
- (2013) François Thomas et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Bioactivity and Applications of Sulphated Polysaccharides from Marine Microalgae
- (2013) Maria Raposo et al. Marine Drugs
- DOOR 2.0: presenting operons and their functions through dynamic and integrated views
- (2013) Xizeng Mao et al. NUCLEIC ACIDS RESEARCH
- Evolution, substrate specificity and subfamily classification of glycoside hydrolase family 5 (GH5)
- (2012) Henrik Aspeborg et al. BMC EVOLUTIONARY BIOLOGY
- Characterization of the first alginolytic operons in a marine bacterium: from their emergence in marine Flavobacteriia to their independent transfers to marine Proteobacteria and human gut Bacteroides
- (2012) François Thomas et al. ENVIRONMENTAL MICROBIOLOGY
- The role of planktonicFlavobacteriain processing algal organic matter in coastal East Antarctica revealed using metagenomics and metaproteomics
- (2012) Timothy J. Williams et al. ENVIRONMENTAL MICROBIOLOGY
- What we can learn from sushi: a review on seaweed-bacterial associations
- (2012) Joke Hollants et al. FEMS MICROBIOLOGY ECOLOGY
- Biochemical and Structural Characterization of the Complex Agarolytic Enzyme System from the Marine BacteriumZobellia galactanivorans
- (2012) Jan-Hendrik Hehemann et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Capturing Single Cell Genomes of Active Polysaccharide Degraders: An Unexpected Contribution of Verrucomicrobia
- (2012) Manuel Martinez-Garcia et al. PLoS One
- Substrate-Controlled Succession of Marine Bacterioplankton Populations Induced by a Phytoplankton Bloom
- (2012) H. Teeling et al. SCIENCE
- Evolution and Diversity of Plant Cell Walls: From Algae to Flowering Plants
- (2011) Zoë A. Popper et al. Annual Review of Plant Biology
- Discovery and structural characterization of a novel glycosidase family of marine origin
- (2011) Etienne Rebuffet et al. ENVIRONMENTAL MICROBIOLOGY
- Light-induced transcriptional responses associated with proteorhodopsin-enhanced growth in a marine flavobacterium
- (2011) Hiroyuki Kimura et al. ISME Journal
- Detecting Novel Associations in Large Data Sets
- (2011) D. N. Reshef et al. SCIENCE
- Complete genome sequence of Cellulophaga algicola type strain (IC166T)
- (2011) Birte Abt et al. Standards in Genomic Sciences
- Environmental and Gut Bacteroidetes: The Food Connection
- (2011) François Thomas et al. Frontiers in Microbiology
- Identification of Catalytic Residues and Mechanistic Analysis of Family GH82 ι-Carrageenases
- (2010) Etienne Rebuffet et al. BIOCHEMISTRY
- ANAIS: Analysis of NimbleGen Arrays Interface
- (2010) A. Simon et al. BIOINFORMATICS
- Structural analysis of the degradation products of porphyran digested by Zobellia galactanivorans β-porphyranase A
- (2010) Gaëlle Correc et al. CARBOHYDRATE POLYMERS
- Study of a novel glycoconjugate, thiopeptidoglycan, and a novel polysaccharide lyase, thiopeptidoglycan lyase
- (2010) Keiko Kondo et al. INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES
- Evaluation of reference genes for real-time quantitative PCR in the marine flavobacterium Zobellia galactanivorans
- (2010) François Thomas et al. JOURNAL OF MICROBIOLOGICAL METHODS
- Towards a better understanding of microbial carbon flux in the sea*
- (2008) JM Gasol et al. AQUATIC MICROBIAL ECOLOGY
- Glycobiology of fertilization in the pig
- (2008) Edda Tpfer-Petersen et al. INTERNATIONAL JOURNAL OF DEVELOPMENTAL BIOLOGY
Add your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload NowAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started