Habitat and taxon as driving forces of carbohydrate catabolism in marine heterotrophic bacteria: example of the model algae-associated bacterium Zobellia galactanivorans DsijT

Unraveling the multivalent binding of a marine family 6 carbohydrate-binding module with its native laminarin ligand

(2016) Murielle Jam et al.   FEBS Journal

Recurring patterns in bacterioplankton dynamics during coastal spring algae blooms

(2016) Hanno Teeling et al.   eLife

Matching the Diversity of Sulfated Biomolecules: Creation of a Classification Database for Sulfatases Reflecting Their Substrate Specificity

(2016) Tristan Barbeyron et al.   PLoS One

Continental-scale variation in seaweed host-associated bacterial communities is a function of host condition, not geography

(2015) Ezequiel M. Marzinelli et al.   ENVIRONMENTAL MICROBIOLOGY

Nitric oxide in marine photosynthetic organisms

(2015) Amit Kumar et al.   NITRIC OXIDE-BIOLOGY AND CHEMISTRY

Twenty years of theMEROPSdatabase of proteolytic enzymes, their substrates and inhibitors

(2015) Neil D. Rawlings et al.   NUCLEIC ACIDS RESEARCH

The Pfam protein families database: towards a more sustainable future

(2015) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH

The Cultivable Surface Microbiota of the Brown Alga Ascophyllum nodosum is Enriched in Macroalgal-Polysaccharide-Degrading Bacteria

(2015) Marjolaine Martin et al.   Frontiers in Microbiology

Structural and biochemical characterization of the laminarinaseZgLamCGH16fromZobellia galactanivoranssuggests preferred recognition of branched laminarin

(2015) Aurore Labourel et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Biochemical and structural investigation of two paralogous glycoside hydrolases fromZobellia galactanivorans: novel insights into the evolution, dimerization plasticity and catalytic mechanism of the GH117 family

(2015) Elizabeth Ficko-Blean et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

The Mannitol Utilization System of the Marine Bacterium Zobellia galactanivorans

(2014) Agnès Groisillier et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The Vanadium Iodoperoxidase from the Marine Flavobacteriaceae Species Zobellia galactanivorans Reveals Novel Molecular and Evolutionary Features of Halide Specificity in the Vanadium Haloperoxidase Enzyme Family

(2014) Jean-Baptiste Fournier et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Microorganisms living on macroalgae: diversity, interactions, and biotechnological applications

(2014) Marjolaine Martin et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

A sweet new wave: structures and mechanisms of enzymes that digest polysaccharides from marine algae

(2014) Jan-Hendrik Hehemann et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Niches of two polysaccharide-degrading Polaribacter isolates from the North Sea during a spring diatom bloom

(2014) Peng Xing et al.   ISME Journal

Master recyclers: features and functions of bacteria associated with phytoplankton blooms

(2014) Alison Buchan et al.   NATURE REVIEWS MICROBIOLOGY

The β-GlucanaseZgLamA fromZobellia galactanivoransEvolved a Bent Active Site Adapted for Efficient Degradation of Algal Laminarin

(2013) Aurore Labourel et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Comparative Characterization of Two Marine Alginate Lyases fromZobellia galactanivoransReveals Distinct Modes of Action and Exquisite Adaptation to Their Natural Substrate

(2013) François Thomas et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Mannitol metabolism in brown algae involves a new phosphatase family

(2013) Agnès Groisillier et al.   JOURNAL OF EXPERIMENTAL BOTANY

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

The carbohydrate-active enzymes database (CAZy) in 2013

(2013) Vincent Lombard et al.   NUCLEIC ACIDS RESEARCH

Phylogenetic diversity of Flavobacteria isolated from the North Sea on solid media

(2013) Richard L. Hahnke et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Evolution, substrate specificity and subfamily classification of glycoside hydrolase family 5 (GH5)

(2012) Henrik Aspeborg et al.   BMC EVOLUTIONARY BIOLOGY

Post-genomic analyses of fungal lignocellulosic biomass degradation reveal the unexpected potential of the plant pathogen Ustilago maydis

(2012) Marie Couturier et al.   BMC GENOMICS

Characterization of the first alginolytic operons in a marine bacterium: from their emergence in marine Flavobacteriia to their independent transfers to marine Proteobacteria and human gut Bacteroides

(2012) François Thomas et al.   ENVIRONMENTAL MICROBIOLOGY

What we can learn from sushi: a review on seaweed-bacterial associations

(2012) Joke Hollants et al.   FEMS MICROBIOLOGY ECOLOGY

Bacterial diversity in relation to secondary production and succession on surfaces of the kelp Laminaria hyperborea

(2012) Mia M Bengtsson et al.   ISME Journal

Gliding Motility and Por Secretion System Genes Are Widespread among Members of the Phylum Bacteroidetes

(2012) Mark J. McBride et al.   JOURNAL OF BACTERIOLOGY

Draft Genome Sequence of the Novel Agarolytic Bacterium Aquimarina agarilytica ZC1

(2012) B. Lin et al.   JOURNAL OF BACTERIOLOGY

Biochemical and Structural Characterization of the Complex Agarolytic Enzyme System from the Marine BacteriumZobellia galactanivorans

(2012) Jan-Hendrik Hehemann et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Influence of Exudates of the Kelp Laminaria Digitata on Biofilm Formation of Associated and Exogenous Bacterial Epiphytes

(2012) Stéphanie Salaün et al.   MICROBIAL ECOLOGY

How glycan metabolism shapes the human gut microbiota

(2012) Nicole M. Koropatkin et al.   NATURE REVIEWS MICROBIOLOGY

Microbial life in the phyllosphere

(2012) Julia A. Vorholt   NATURE REVIEWS MICROBIOLOGY

Substrate-Controlled Succession of Marine Bacterioplankton Populations Induced by a Phytoplankton Bloom

(2012) H. Teeling et al.   SCIENCE

Evolution and Diversity of Plant Cell Walls: From Algae to Flowering Plants

(2011) Zoë A. Popper et al.   Annual Review of Plant Biology

Bacterial nitrate assimilation: gene distribution and regulation

(2011) Víctor M. Luque-Almagro et al.   BIOCHEMICAL SOCIETY TRANSACTIONS

Discovery and structural characterization of a novel glycosidase family of marine origin

(2011) Etienne Rebuffet et al.   ENVIRONMENTAL MICROBIOLOGY

Environmental and Gut Bacteroidetes: The Food Connection

(2011) François Thomas et al.   Frontiers in Microbiology

Bacterial Nitric Oxide Synthases

(2010) Brian R. Crane et al.   Annual Review of Biochemistry

A hierarchical classification of polysaccharide lyases for glycogenomics

(2010) Vincent Lombard et al.   BIOCHEMICAL JOURNAL

Fine-scale evolution: genomic, phenotypic and ecological differentiation in two coexisting Salinibacter ruber strains

(2010) Arantxa Peña et al.   ISME Journal

Evaluation of reference genes for real-time quantitative PCR in the marine flavobacterium Zobellia galactanivorans

(2010) François Thomas et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Transfer of carbohydrate-active enzymes from marine bacteria to Japanese gut microbiota

(2010) Jan-Hendrik Hehemann et al.   NATURE

Central and storage carbon metabolism of the brown alga Ectocarpus siliculosus: insights into the origin and evolution of storage carbohydrates in Eukaryotes

(2010) Gurvan Michel et al.   NEW PHYTOLOGIST

Mannitol-1-phosphate dehydrogenase activity in Ectocarpus siliculosus, a key role for mannitol synthesis in brown algae

(2010) Sylvie Rousvoal et al.   PLANTA

Transporter genes expressed by coastal bacterioplankton in response to dissolved organic carbon

(2009) Rachel S. Poretsky et al.   ENVIRONMENTAL MICROBIOLOGY

How the walls come crumbling down: recent structural biochemistry of plant polysaccharide degradation

(2008) H GILBERT et al.   CURRENT OPINION IN PLANT BIOLOGY

Comparative genomics of two ecotypes of the marine planktonic copiotroph Alteromonas macleodii suggests alternative lifestyles associated with different kinds of particulate organic matter

(2008) Elena Ivars-Martinez et al.   ISME Journal

Comparative Analysis of Acinetobacters: Three Genomes for Three Lifestyles

(2008) David Vallenet et al.   PLoS One

Starch Catabolism by a Prominent Human Gut Symbiont Is Directed by the Recognition of Amylose Helices

(2008) Nicole M. Koropatkin et al.   STRUCTURE

Complete Genome Sequence of the Complex Carbohydrate-Degrading Marine Bacterium, Saccharophagus degradans Strain 2-40T

(2008) Ronald M. Weiner et al.   PLoS Genetics

Structure and function of hybrid carrageenans

(2007) Fred van de Velde   FOOD HYDROCOLLOIDS