A novel twelve class fluctuation test reveals higher than expected mutation rates for influenza A viruses

Influenza virus RNA polymerase: insights into the mechanisms of viral RNA synthesis

(2016) Aartjan J. W. te Velthuis et al.   NATURE REVIEWS MICROBIOLOGY

Antigenic diversification is correlated with increased thermostability in a mammalian virus

(2016) John B. Presloid et al.   VIROLOGY

The Mutational Robustness of Influenza A Virus

(2016) Elisa Visher et al.   PLoS Pathogens

Highly heterogeneous mutation rates in the hepatitis C virus genome

(2016) Ron Geller et al.   Nature Microbiology

Single-Cell Analysis of RNA Virus Infection Identifies Multiple Genetically Diverse Viral Genomes within Single Infectious Units

(2015) Marine Combe et al.   Cell Host & Microbe

Effective Lethal Mutagenesis of Influenza Virus by Three Nucleoside Analogs

(2015) Matthew D. Pauly et al.   JOURNAL OF VIROLOGY

Primer ID Validates Template Sampling Depth and Greatly Reduces the Error Rate of Next-Generation Sequencing of HIV-1 Genomic RNA Populations

(2015) Shuntai Zhou et al.   JOURNAL OF VIROLOGY

The external domains of the HIV-1 envelope are a mutational cold spot

(2015) Ron Geller et al.   Nature Communications

GFP Loss-of-Function Mutations in Arabidopsis thaliana

(2015) Jason L. Fu et al.   G3-Genes Genomes Genetics

Extremely High Mutation Rate of HIV-1 In Vivo

(2015) José M. Cuevas et al.   PLOS BIOLOGY

An Experimentally Determined Evolutionary Model Dramatically Improves Phylogenetic Fit

(2014) Jesse D. Bloom   MOLECULAR BIOLOGY AND EVOLUTION

Generation and characterization of influenza A viruses with altered polymerase fidelity

(2014) Peter P. H. Cheung et al.   Nature Communications

Variation in RNA Virus Mutation Rates across Host Cells

(2014) Marine Combe et al.   PLoS Pathogens

Variation of HIV-1 Mutation Spectra among Cell Types

(2013) C. M. Holtz et al.   JOURNAL OF VIROLOGY

T-705 (Favipiravir) Induces Lethal Mutagenesis in Influenza A H1N1 Viruses In Vitro

(2013) T. Baranovich et al.   JOURNAL OF VIROLOGY

Mutational and fitness landscapes of an RNA virus revealed through population sequencing

(2013) Ashley Acevedo et al.   NATURE

Causes and Implications of Codon Usage Bias in RNA Viruses

(2013) Ilya S. Belalov et al.   PLoS One

Large-scale detection of in vivo transcription errors

(2013) J.-F. Gout et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Mapping Viral Functional Domains for Genetic Diversity in Plants

(2012) J. S. Pita et al.   JOURNAL OF VIROLOGY

Determination of Spontaneous Mutation Frequencies in Measles Virus under Nonselective Conditions

(2012) X. Zhang et al.   JOURNAL OF VIROLOGY

ViennaRNA Package 2.0

(2011) Ronny Lorenz et al.   Algorithms for Molecular Biology

Accurate sampling and deep sequencing of the HIV-1 protease gene using a Primer ID

(2011) C. B. Jabara et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Adenosine deaminases acting on RNA (ADARs) are both antiviral and proviral

(2011) Charles E. Samuel   VIROLOGY

Viral mutation and substitution: units and levels

(2011) Robert Belshaw et al.   Current Opinion in Virology

The Rate and Spectrum of Spontaneous Mutations in a Plant RNA Virus

(2010) N. Tromas et al.   GENETICS

The Mechanism of Cyclization in Chromophore Maturation of Green Fluorescent Protein: A Theoretical Study

(2010) Yingying Ma et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Viral Mutation Rates

(2010) R. Sanjuan et al.   JOURNAL OF VIROLOGY

Mutational fitness effects in RNA and single-stranded DNA viruses: common patterns revealed by site-directed mutagenesis studies

(2010) R. Sanjuan   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Biochemical Characterization of Enzyme Fidelity of Influenza A Virus RNA Polymerase Complex

(2010) Shilpa Aggarwal et al.   PLoS One

Biochemical and kinetic analysis of the influenza virus RNA polymerase purified from insect cells

(2009) Shijian Zhang et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Effect of Ribavirin on the Mutation Rate and Spectrum of Hepatitis C Virus In Vivo

(2009) J. M. Cuevas et al.   JOURNAL OF VIROLOGY

Hemagglutinin-Pseudotyped Green Fluorescent Protein-Expressing Influenza Viruses for the Detection of Influenza Virus Neutralizing Antibodies

(2009) L. Martinez-Sobrido et al.   JOURNAL OF VIROLOGY

Avian Influenza Virus Glycoproteins Restrict Virus Replication and Spread through Human Airway Epithelium at Temperatures of the Proximal Airways

(2009) Margaret A. Scull et al.   PLoS Pathogens

The human H5N1 influenza A virus polymerase complex is active in vitro over a broad range of temperatures, in contrast to the WSN complex, and this property can be attributed to the PB2 subunit

(2008) B. G. Bradel-Tretheway et al.   JOURNAL OF GENERAL VIROLOGY

Computational Prediction of Absorbance Maxima for a Structurally Diverse Series of Engineered Green Fluorescent Protein Chromophores

(2008) Qadir K. Timerghazin et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Patterns of Evolution and Host Gene Mimicry in Influenza and Other RNA Viruses

(2008) Benjamin D. Greenbaum et al.   PLoS Pathogens