QTL associated with resistance to cassava brown streak and cassava mosaic diseases in a bi-parental cross of two Tanzanian farmer varieties, Namikonga and Albert

Variability in P1 gene redefines phylogenetic relationships among cassava brown streak viruses

(2017) Willard Mbewe et al.   Virology Journal

Eleven years of breeding efforts to combat cassava brown streak disease

(2016) Robert Sezi Kawuki et al.   BREEDING SCIENCE

Sequencing wild and cultivated cassava and related species reveals extensive interspecific hybridization and genetic diversity

(2016) Jessen V Bredeson et al.   NATURE BIOTECHNOLOGY

Genome-Wide Association and Prediction Reveals Genetic Architecture of Cassava Mosaic Disease Resistance and Prospects for Rapid Genetic Improvement

(2016) Marnin D. Wolfe et al.   Plant Genome

Cassava brown streak disease: a threat to food security in Africa

(2015) Basavaprabhu L. Patil et al.   JOURNAL OF GENERAL VIROLOGY

Conventional breeding, marker-assisted selection, genomic selection and inbreeding in clonally propagated crops: a case study for cassava

(2015) Hernán Ceballos et al.   THEORETICAL AND APPLIED GENETICS

Simple sequence repeat (SSR) diversity of cassava in South, East and Central Africa in relation to resistance to cassava brown streak disease

(2015) Pariyo A et al.   AFRICAN JOURNAL OF BIOTECHNOLOGY

Analyses of Twelve New Whole Genome Sequences of Cassava Brown Streak Viruses and Ugandan Cassava Brown Streak Viruses from East Africa: Diversity, Supercomputing and Evidence for Further Speciation

(2015) Joseph Ndunguru et al.   PLoS One

High-density genetic linkage map construction and identification of fruit-related QTLs in pear using SNP and SSR markers

(2014) Jun Wu et al.   JOURNAL OF EXPERIMENTAL BOTANY

Transcriptional Response of Virus-Infected Cassava and Identification of Putative Sources of Resistance for Cassava Brown Streak Disease

(2014) M. N. Maruthi et al.   PLoS One

Field evaluation of selected cassava genotypes for cassava brown streak disease based on symptom expression and virus load

(2014) Tadeo Kaweesi et al.   Virology Journal

High-resolution mapping of resistance to cassava mosaic geminiviruses in cassava using genotyping-by-sequencing and its implications for breeding

(2014) Ismail Y. Rabbi et al.   VIRUS RESEARCH

A global alliance declaring war on cassava viruses in Africa

(2014) James Legg et al.   Food Security

Genetic diversity of cassava (Manihot esculenta Crantz) landraces and cultivars from southern, eastern and central Africa

(2013) R. S. Kawuki et al.   Plant Genetic Resources-Characterization and Utilization

High-density genotyping: an overkill for QTL mapping? Lessons learned from a case study in maize and simulations

(2013) Michael Stange et al.   THEORETICAL AND APPLIED GENETICS

Molecular Marker Analysis and Validation of Resistance to Cassava Mosaic Disease in Elite Cassava Genotypes in Nigeria

(2012) E. Okogbenin et al.   CROP SCIENCE

Diallel analysis of field resistance to brown streak disease in cassava (Manihot esculenta Crantz) landraces from Tanzania

(2012) H. P. Kulembeka et al.   EUPHYTICA

Model selection for quantitative trait loci mapping in a full-sib family

(2012) Chunfa Tong et al.   GENETICS AND MOLECULAR BIOLOGY

High throughput real-time RT-PCR assays for specific detection of cassava brown streak disease causal viruses, and their application to testing of planting material

(2012) I. P. Adams et al.   PLANT PATHOLOGY

Exploiting the Combination of Natural and Genetically Engineered Resistance to Cassava Mosaic and Cassava Brown Streak Viruses Impacting Cassava Production in Africa

(2012) Hervé Vanderschuren et al.   PLoS One

An EST-derived SNP and SSR genetic linkage map of cassava (Manihot esculenta Crantz)

(2012) Ismail Yusuf Rabbi et al.   THEORETICAL AND APPLIED GENETICS

The Cassava Genome: Current Progress, Future Directions

(2012) Simon Prochnik et al.   Tropical Plant Biology

Reference genes for reliable potyvirus quantitation in cassava and analysis of Cassava brown streak virus load in host varieties

(2011) Isabel Moreno et al.   JOURNAL OF VIROLOGICAL METHODS

A Robust, Simple Genotyping-by-Sequencing (GBS) Approach for High Diversity Species

(2011) Robert J. Elshire et al.   PLoS One

Analysis of cassava brown streak viruses reveals the presence of distinct virus species causing cassava brown streak disease in East Africa

(2010) S. Winter et al.   JOURNAL OF GENERAL VIROLOGY

Evolution of cassava brown streak disease-associated viruses

(2010) D. R. Mbanzibwa et al.   JOURNAL OF GENERAL VIROLOGY

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Closing the cassava yield gap: An analysis from smallholder farms in East Africa

(2009) A.M. Fermont et al.   FIELD CROPS RESEARCH

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY