The challenges of detecting subtle population structure and its importance for the conservation of emperor penguins

Rise and fall of Ross Sea emperor penguin colony populations: 2000 to 2012

(2016) G.L. Kooyman et al.   ANTARCTIC SCIENCE

Dispersal in the sub-Antarctic: king penguins show remarkably little population genetic differentiation across their range

(2016) Gemma V. Clucas et al.   BMC EVOLUTIONARY BIOLOGY

Plumage Genes and Little Else Distinguish the Genomes of Hybridizing Warblers

(2016) David P.L. Toews et al.   CURRENT BIOLOGY

Integrated population modeling reveals the impact of climate on the survival of juvenile emperor penguins

(2016) Fitsum Abadi et al.   GLOBAL CHANGE BIOLOGY

Climate-driven vital rates do not always mean climate-driven population

(2016) Giacomo Tavecchia et al.   GLOBAL CHANGE BIOLOGY

Conservation genomics of natural and managed populations: building a conceptual and practical framework

(2016) Laura Marilyn Benestan et al.   MOLECULAR ECOLOGY

Sequence Capture versus Restriction Site Associated DNA Sequencing for Shallow Systematics

(2016) Michael G. Harvey et al.   SYSTEMATIC BIOLOGY

Full circumpolar migration ensures evolutionary unity in the Emperor penguin

(2016) Robin Cristofari et al.   Nature Communications

Proliferation of East Antarctic Adélie penguins in response to historical deglaciation

(2015) Jane Younger et al.   BMC EVOLUTIONARY BIOLOGY

Too much of a good thing: sea ice extent may have forced emperor penguins into refugia during the last glacial maximum

(2015) Jane L. Younger et al.   GLOBAL CHANGE BIOLOGY

Genomic variation in a widespread Neotropical bird (Xenops minutus) reveals divergence, population expansion, and gene flow

(2015) Michael G. Harvey et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Limited genetic differentiation among chinstrap penguin (Pygoscelis antarctica) colonies in the Scotia Arc and Western Antarctic Peninsula

(2015) Jennifer J. Freer et al.   POLAR BIOLOGY

First global census of the Adélie Penguin

(2014) H. J. Lynch et al.   AUK

Linkage maps of the Atlantic salmon (Salmo salar) genome derived from RAD sequencing

(2014) Serap Gonen et al.   BMC GENOMICS

Pollution, habitat loss, fishing, and climate change as critical threats to penguins

(2014) Phil N. Trathan et al.   CONSERVATION BIOLOGY

Emigration in emperor penguins: implications for interpretation of long-term studies

(2014) Michelle A. LaRue et al.   ECOGRAPHY

Evaluation of demographic history and neutral parameterization on the performance ofFSToutlier tests

(2014) Katie E. Lotterhos et al.   MOLECULAR ECOLOGY

Emperor Penguins Breeding on Iceshelves

(2014) Peter T. Fretwell et al.   PLoS One

Emperors in Hiding: When Ice-Breakers and Satellites Complement Each Other in Antarctic Exploration

(2014) André Ancel et al.   PLoS One

Projected continent-wide declines of the emperor penguin under climate change

(2014) Stéphanie Jenouvrier et al.   Nature Climate Change

A reversal of fortunes: climate change ‘winners’ and ‘losers’ in Antarctic Peninsula penguins

(2014) Gemma V. Clucas et al.   Scientific Reports

BEAST 2: A Software Platform for Bayesian Evolutionary Analysis

(2014) Remco Bouckaert et al.   PLoS Computational Biology

Three-dimensional use of marine habitats by juvenile emperor penguins Aptenodytes forsteri during post-natal dispersal

(2013) Jean-Baptiste Thiebot et al.   ANTARCTIC SCIENCE

Stacks: an analysis tool set for population genomics

(2013) Julian Catchen et al.   MOLECULAR ECOLOGY

diveRsity: AnRpackage for the estimation and exploration of population genetics parameters and their associated errors

(2013) Kevin Keenan et al.   Methods in Ecology and Evolution

The Relationship Between FST and the Frequency of the Most Frequent Allele

(2012) M. Jakobsson et al.   GENETICS

Regions of rapid sea ice change: An inter-hemispheric seasonal comparison

(2012) Sharon Stammerjohn et al.   GEOPHYSICAL RESEARCH LETTERS

Effects of climate change on an emperor penguin population: analysis of coupled demographic and climate models

(2012) Stéphanie Jenouvrier et al.   GLOBAL CHANGE BIOLOGY

AMOVA-Based Clustering of Population Genetic Data

(2012) Patrick G. Meirmans   JOURNAL OF HEREDITY

Inferring Species Trees Directly from Biallelic Genetic Markers: Bypassing Gene Trees in a Full Coalescent Analysis

(2012) David Bryant et al.   MOLECULAR BIOLOGY AND EVOLUTION

An Emperor Penguin Population Estimate: The First Global, Synoptic Survey of a Species from Space

(2012) Peter T. Fretwell et al.   PLoS One

Harnessing genomics for delineating conservation units

(2012) W. Chris Funk et al.   TRENDS IN ECOLOGY & EVOLUTION

Comparison of emperor penguin declines between Pointe Géologie and Haswell Island over the past 50 years

(2011) Christophe Barbraud et al.   ANTARCTIC SCIENCE

PGDSpider: an automated data conversion tool for connecting population genetics and genomics programs

(2011) H. E. L. Lischer et al.   BIOINFORMATICS

The variant call format and VCFtools

(2011) P. Danecek et al.   BIOINFORMATICS

adegenet 1.3-1: new tools for the analysis of genome-wide SNP data

(2011) Thibaut Jombart et al.   BIOINFORMATICS

The fishery for Antarctic krill - recent developments

(2011) Stephen Nicol et al.   FISH AND FISHERIES

First Recorded Loss of an Emperor Penguin Colony in the Recent Period of Antarctic Regional Warming: Implications for Other Colonies

(2011) Philip N. Trathan et al.   PLoS One

Assessing Significance in High-Throughput Experiments by Sequential Goodness of Fit and q-Value Estimation

(2011) Antonio Carvajal-Rodriguez et al.   PLoS One

STRUCTURE HARVESTER: a website and program for visualizing STRUCTURE output and implementing the Evanno method

(2011) Dent A. Earl et al.   Conservation Genetics Resources

Stacks : Building and Genotyping Loci De Novo From Short-Read Sequences

(2011) Julian M. Catchen et al.   G3-Genes Genomes Genetics

Discriminant analysis of principal components: a new method for the analysis of genetically structured populations

(2010) Thibaut Jombart et al.   BMC GENETICS

Antarctic penguin response to habitat change as Earth's troposphere reaches 2°C above preindustrial levels

(2010) David Ainley et al.   ECOLOGICAL MONOGRAPHS

Maiden journey of fledgling emperor penguins from the Mawson Coast, East Antarctica

(2010) B Wienecke et al.   MARINE ECOLOGY PROGRESS SERIES

What can genetics tell us about population connectivity?

(2010) WINSOR H. LOWE et al.   MOLECULAR ECOLOGY

Penguin responses to climate change in the Southern Ocean

(2009) JAUME FORCADA et al.   GLOBAL CHANGE BIOLOGY

Demographic models and IPCC climate projections predict the decline of an emperor penguin population

(2009) Stéphanie Jenouvrier et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Genome-Scan Method to Identify Selected Loci Appropriate for Both Dominant and Codominant Markers: A Bayesian Perspective

(2008) M. Foll et al.   GENETICS

Rapid SNP Discovery and Genetic Mapping Using Sequenced RAD Markers

(2008) Nathan A. Baird et al.   PLoS One