Dispersal in the sub-Antarctic: king penguins show remarkably little population genetic differentiation across their range

Climate-driven vital rates do not always mean climate-driven population

(2016) Giacomo Tavecchia et al.   GLOBAL CHANGE BIOLOGY

Conservation genomics of natural and managed populations: building a conceptual and practical framework

(2016) Laura Marilyn Benestan et al.   MOLECULAR ECOLOGY

Sequence Capture versus Restriction Site Associated DNA Sequencing for Shallow Systematics

(2016) Michael G. Harvey et al.   SYSTEMATIC BIOLOGY

Full circumpolar migration ensures evolutionary unity in the Emperor penguin

(2016) Robin Cristofari et al.   Nature Communications

Population structure and phylogeography of the Gentoo Penguin (Pygoscelis papua) across the Scotia Arc

(2016) Hila Levy et al.   Ecology and Evolution

Proliferation of East Antarctic Adélie penguins in response to historical deglaciation

(2015) Jane Younger et al.   BMC EVOLUTIONARY BIOLOGY

Too much of a good thing: sea ice extent may have forced emperor penguins into refugia during the last glacial maximum

(2015) Jane L. Younger et al.   GLOBAL CHANGE BIOLOGY

The influence of historical climate changes on Southern Ocean marine predator populations: a comparative analysis

(2015) Jane L. Younger et al.   GLOBAL CHANGE BIOLOGY

TRES: Identification of Discriminatory and Informative SNPs from Population Genomic Data: Figure 1.

(2015) Ioannis Kavakiotis et al.   JOURNAL OF HEREDITY

Genomic variation in a widespread Neotropical bird (Xenops minutus) reveals divergence, population expansion, and gene flow

(2015) Michael G. Harvey et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Limited genetic differentiation among chinstrap penguin (Pygoscelis antarctica) colonies in the Scotia Arc and Western Antarctic Peninsula

(2015) Jennifer J. Freer et al.   POLAR BIOLOGY

Short Tree, Long Tree, Right Tree, Wrong Tree: New Acquisition Bias Corrections for Inferring SNP Phylogenies

(2015) Adam D. Leaché et al.   SYSTEMATIC BIOLOGY

Intronic regulation of Aire expression by Jmjd6 for self-tolerance induction in the thymus

(2015) Toyoshi Yanagihara et al.   Nature Communications

First global census of the Adélie Penguin

(2014) H. J. Lynch et al.   AUK

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

Linkage maps of the Atlantic salmon (Salmo salar) genome derived from RAD sequencing

(2014) Serap Gonen et al.   BMC GENOMICS

Winter foraging site fidelity of king penguins breeding at the Falkland Islands

(2014) Alastair M. M. Baylis et al.   MARINE BIOLOGY

Evaluation of demographic history and neutral parameterization on the performance ofFSToutlier tests

(2014) Katie E. Lotterhos et al.   MOLECULAR ECOLOGY

Post-Fledging Dispersal of King Penguins (Aptenodytes patagonicus) from Two Breeding Sites in the South Atlantic

(2014) Klemens Pütz et al.   PLoS One

King penguin demography since the last glaciation inferred from genome-wide data

(2014) E. Trucchi et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

A reversal of fortunes: climate change ‘winners’ and ‘losers’ in Antarctic Peninsula penguins

(2014) Gemma V. Clucas et al.   Scientific Reports

BEAST 2: A Software Platform for Bayesian Evolutionary Analysis

(2014) Remco Bouckaert et al.   PLoS Computational Biology

Drivers of population genetic differentiation in the wild: isolation by dispersal limitation, isolation by adaptation and isolation by colonization

(2013) Luisa Orsini et al.   MOLECULAR ECOLOGY

Stacks: an analysis tool set for population genomics

(2013) Julian Catchen et al.   MOLECULAR ECOLOGY

Population development and historical occurrence of king penguins at the Falkland Islands

(2012) Pierre A. Pistorius et al.   ANTARCTIC SCIENCE

King penguin population on Macquarie Island recovers ancient DNA diversity after heavy exploitation in historic times

(2012) T. H. Heupink et al.   Biology Letters

Frontal zones, temperature gradient and depth characterize the foraging habitat of king penguins at South Georgia

(2012) A Scheffer et al.   MARINE ECOLOGY PROGRESS SERIES

Inferring Species Trees Directly from Biallelic Genetic Markers: Bypassing Gene Trees in a Full Coalescent Analysis

(2012) David Bryant et al.   MOLECULAR BIOLOGY AND EVOLUTION

An Emperor Penguin Population Estimate: The First Global, Synoptic Survey of a Species from Space

(2012) Peter T. Fretwell et al.   PLoS One

Projected poleward shift of king penguins' (Aptenodytes patagonicus) foraging range at the Crozet Islands, southern Indian Ocean

(2012) C. Peron et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

PGDSpider: an automated data conversion tool for connecting population genetics and genomics programs

(2011) H. E. L. Lischer et al.   BIOINFORMATICS

The variant call format and VCFtools

(2011) P. Danecek et al.   BIOINFORMATICS

adegenet 1.3-1: new tools for the analysis of genome-wide SNP data

(2011) Thibaut Jombart et al.   BIOINFORMATICS

Comparison of measures of marker informativeness for ancestry and admixture mapping

(2011) Lili Ding et al.   BMC GENOMICS

Effects of Individual Pre-Fledging Traits and Environmental Conditions on Return Patterns in Juvenile King Penguins

(2011) Claire Saraux et al.   PLoS One

Assessing Significance in High-Throughput Experiments by Sequential Goodness of Fit and q-Value Estimation

(2011) Antonio Carvajal-Rodriguez et al.   PLoS One

STRUCTURE HARVESTER: a website and program for visualizing STRUCTURE output and implementing the Evanno method

(2011) Dent A. Earl et al.   Conservation Genetics Resources

DensiTree: making sense of sets of phylogenetic trees

(2010) R. R. Bouckaert   BIOINFORMATICS

Discriminant analysis of principal components: a new method for the analysis of genetically structured populations

(2010) Thibaut Jombart et al.   BMC GENETICS

How Many Bootstrap Replicates Are Necessary?

(2010) Nicholas D. Pattengale et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Tipping back the balance: recolonization of the Macquarie Island isthmus by king penguins (Aptenodytes patagonicus) following extermination for human gain

(2009) John van den Hoff et al.   ANTARCTIC SCIENCE

The importance of oceanographic fronts to marine birds and mammals of the southern oceans

(2009) C.A. Bost et al.   JOURNAL OF MARINE SYSTEMS

adegenet: a R package for the multivariate analysis of genetic markers

(2008) Thibaut Jombart   BIOINFORMATICS

A Genome-Scan Method to Identify Selected Loci Appropriate for Both Dominant and Codominant Markers: A Bayesian Perspective

(2008) M. Foll et al.   GENETICS

The breeding biology and population dynamics of King Penguins Aptenodytes patagonica on the Crozet Islands

(2008) H. WEIMERSKIRCH et al.   IBIS

Rapid SNP Discovery and Genetic Mapping Using Sequenced RAD Markers

(2008) Nathan A. Baird et al.   PLoS One

King penguin population threatened by Southern Ocean warming

(2008) C. Le Bohec et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA