Full circumpolar migration ensures evolutionary unity in the Emperor penguin

Predicting changes in the distribution and abundance of species under environmental change

(2015) Johan Ehrlén et al.   ECOLOGY LETTERS

Morphological and genomic comparisons of Hawaiian and Japanese Black-footed Albatrosses (Phoebastria nigripes) using double digest RADseq: implications for conservation

(2015) Elisa G. Dierickx et al.   Evolutionary Applications

Nonequilibrium Conditions Explain Spatial Variability in Genetic Structuring of Little Penguin (Eudyptula minor)

(2015) C. P. Burridge et al.   JOURNAL OF HEREDITY

The changing form of Antarctic biodiversity

(2015) Steven L. Chown et al.   NATURE

Testing for effects of climate change on competitive relationships and coexistence between two bird species

(2015) N. C. Stenseth et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Extreme ecological response of a seabird community to unprecedented sea ice cover

(2015) C. Barbraud et al.   Royal Society Open Science

ngsTools: methods for population genetics analyses from next-generation sequencing data

(2014) Matteo Fumagalli et al.   BIOINFORMATICS

ANGSD: Analysis of Next Generation Sequencing Data

(2014) Thorfinn Sand Korneliussen et al.   BMC BIOINFORMATICS

Emigration in emperor penguins: implications for interpretation of long-term studies

(2014) Michelle A. LaRue et al.   ECOGRAPHY

fastSTRUCTURE: Variational Inference of Population Structure in Large SNP Data Sets

(2014) Anil Raj et al.   GENETICS

Comparative population genomics in animals uncovers the determinants of genetic diversity

(2014) J. Romiguier et al.   NATURE

Emperors in Hiding: When Ice-Breakers and Satellites Complement Each Other in Antarctic Exploration

(2014) André Ancel et al.   PLoS One

King penguin demography since the last glaciation inferred from genome-wide data

(2014) E. Trucchi et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Complex evolutionary trajectories of sex chromosomes across bird taxa

(2014) Q. Zhou et al.   SCIENCE

Projected continent-wide declines of the emperor penguin under climate change

(2014) Stéphanie Jenouvrier et al.   Nature Climate Change

BEAST 2: A Software Platform for Bayesian Evolutionary Analysis

(2014) Remco Bouckaert et al.   PLoS Computational Biology

Two Antarctic penguin genomes reveal insights into their evolutionary history and molecular changes related to the Antarctic environment

(2014) Cai Li et al.   GigaScience

Three-dimensional use of marine habitats by juvenile emperor penguins Aptenodytes forsteri during post-natal dispersal

(2013) Jean-Baptiste Thiebot et al.   ANTARCTIC SCIENCE

Chick production at the largest emperor penguin colony decreases by 50% from 2008–10

(2013) G.L. Kooyman et al.   ANTARCTIC SCIENCE

Quantifying Population Genetic Differentiation from Next-Generation Sequencing Data

(2013) Matteo Fumagalli et al.   GENETICS

Estimating Individual Admixture Proportions from Next Generation Sequencing Data

(2013) Line Skotte et al.   GENETICS

Stacks: an analysis tool set for population genomics

(2013) Julian Catchen et al.   MOLECULAR ECOLOGY

Recent Demographic History and Present Fine-Scale Structure in the Northwest Atlantic Leatherback (Dermochelys coriacea) Turtle Population

(2013) Érica Molfetti et al.   PLoS One

Robust Demographic Inference from Genomic and SNP Data

(2013) Laurent Excoffier et al.   PLoS Genetics

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

An Emperor Penguin Population Estimate: The First Global, Synoptic Survey of a Species from Space

(2012) Peter T. Fretwell et al.   PLoS One

Inference of Population Splits and Mixtures from Genome-Wide Allele Frequency Data

(2012) Joseph K. Pickrell et al.   PLoS Genetics

Comparison of emperor penguin declines between Pointe Géologie and Haswell Island over the past 50 years

(2011) Christophe Barbraud et al.   ANTARCTIC SCIENCE

fastsimcoal: a continuous-time coalescent simulator of genomic diversity under arbitrarily complex evolutionary scenarios

(2011) Laurent Excoffier et al.   BIOINFORMATICS

The variant call format and VCFtools

(2011) P. Danecek et al.   BIOINFORMATICS

An ethical issue in biodiversity science: The monitoring of penguins with flipper bands

(2011) Yvon Le Maho et al.   COMPTES RENDUS BIOLOGIES

Climate change and evolutionary adaptation

(2011) Ary A. Hoffmann et al.   NATURE

A framework for variation discovery and genotyping using next-generation DNA sequencing data

(2011) Mark A DePristo et al.   NATURE GENETICS

First Recorded Loss of an Emperor Penguin Colony in the Recent Period of Antarctic Regional Warming: Implications for Other Colonies

(2011) Philip N. Trathan et al.   PLoS One

pegas: an R package for population genetics with an integrated-modular approach

(2010) E. Paradis   BIOINFORMATICS

BEDTools: a flexible suite of utilities for comparing genomic features

(2010) Aaron R. Quinlan et al.   BIOINFORMATICS

Discriminant analysis of principal components: a new method for the analysis of genetically structured populations

(2010) Thibaut Jombart et al.   BMC GENETICS

Antarctic penguin response to habitat change as Earth's troposphere reaches 2°C above preindustrial levels

(2010) David Ainley et al.   ECOLOGICAL MONOGRAPHS

The Confounding Effects of Population Structure, Genetic Diversity and the Sampling Scheme on the Detection and Quantification of Population Size Changes

(2010) L. Chikhi et al.   GENETICS

Unified Framework to Evaluate Panmixia and Migration Direction Among Multiple Sampling Locations

(2010) P. Beerli et al.   GENETICS

Genomics and the future of conservation genetics

(2010) Fred W. Allendorf et al.   NATURE REVIEWS GENETICS

New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0

(2010) Stéphane Guindon et al.   SYSTEMATIC BIOLOGY

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Penguin responses to climate change in the Southern Ocean

(2009) JAUME FORCADA et al.   GLOBAL CHANGE BIOLOGY

Impacts of cetaceans on the structure of Southern Ocean food webs

(2009) David Ainley et al.   MARINE MAMMAL SCIENCE

Reconstructing Indian population history

(2009) David Reich et al.   NATURE

adegenet: a R package for the multivariate analysis of genetic markers

(2008) Thibaut Jombart   BIOINFORMATICS

Bayesian inference of population size history from multiple loci

(2008) Joseph Heled et al.   BMC EVOLUTIONARY BIOLOGY

Mitochondrial DNA under siege in avian phylogeography

(2008) ROBERT M. ZINK et al.   MOLECULAR ECOLOGY

Rapid SNP Discovery and Genetic Mapping Using Sequenced RAD Markers

(2008) Nathan A. Baird et al.   PLoS One

Adaptive Phenotypic Plasticity in Response to Climate Change in a Wild Bird Population

(2008) A. Charmantier et al.   SCIENCE