Multiple links between shade avoidance and auxin networks

Meta-Analysis of the Transcriptome Reveals a Core Set of Shade-Avoidance Genes in Arabidopsis

(2017) Romina Sellaro et al.   PHOTOCHEMISTRY AND PHOTOBIOLOGY

Variation in auxin sensing guides AUX/IAA transcriptional repressor ubiquitylation and destruction

(2017) Martin Winkler et al.   Nature Communications

Coordination of Cryptochrome and Phytochrome Signals in the Regulation of Plant Light Responses

(2017) Jun Su et al.   Agronomy-Basel

Light-Mediated Hormonal Regulation of Plant Growth and Development

(2016) Mieke de Wit et al.   Annual Review of Plant Biology

Regulatory modules controlling early shade avoidance response in maize seedlings

(2016) Hai Wang et al.   BMC GENOMICS

Cryptochromes Interact Directly with PIFs to Control Plant Growth in Limiting Blue Light

(2016) Ullas V. Pedmale et al.   CELL

Shade Promotes Phototropism through Phytochrome B-Controlled Auxin Production

(2016) Anupama Goyal et al.   CURRENT BIOLOGY

Integration of Phytochrome and Cryptochrome Signals Determines Plant Growth during Competition for Light

(2016) Mieke de Wit et al.   CURRENT BIOLOGY

Photoreceptor crosstalk in shade avoidance

(2016) Donald P Fraser et al.   CURRENT OPINION IN PLANT BIOLOGY

The epidermis coordinates auxin-induced stem growth in response to shade

(2016) Carl Procko et al.   GENES & DEVELOPMENT

Convergence of CONSTITUTIVE PHOTOMORPHOGENESIS 1 and PHYTOCHROME INTERACTING FACTOR signalling during shade avoidance

(2016) Manuel Pacín et al.   NEW PHYTOLOGIST

Neighbor Detection Induces Organ-Specific Transcriptomes, Revealing Patterns Underlying Hypocotyl-Specific Growth

(2016) Markus V. Kohnen et al.   PLANT CELL

SHADE AVOIDANCE 4 Is Required for Proper Auxin Distribution in the Hypocotyl

(2016) Yanhua Ge et al.   PLANT PHYSIOLOGY

Constitutive Expression of Arabidopsis SMALL AUXIN UP RNA19 ( SAUR19 ) in Tomato Confers Auxin-Independent Hypocotyl Elongation

(2016) Angela K. Spartz et al.   PLANT PHYSIOLOGY

ArabidopsisSAURs are critical for differential light regulation of the development of various organs

(2016) Ning Sun et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Dynamic regulation of auxin oxidase and conjugating enzymesAtDAO1andGH3modulates auxin homeostasis

(2016) Nathan Mellor et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

YUCCAauxin biosynthetic genes are required for Arabidopsis shade avoidance

(2016) Patricia Müller-Moulé et al.   PeerJ

Contrasting growth responses in lamina and petiole during neighbor detection depend on differential auxin responsiveness rather than different auxin levels

(2015) Mieke de Wit et al.   NEW PHYTOLOGIST

Spatial Regulation of the Gene Expression Response to Shade in Arabidopsis Seedlings

(2015) Kazumasa Nito et al.   PLANT AND CELL PHYSIOLOGY

SCFTIR1/AFB-Based Auxin Perception: Mechanism and Role in Plant Growth and Development

(2015) Mohammad Salehin et al.   PLANT CELL

Illuminating Progress in Phytochrome-Mediated Light Signaling Pathways

(2015) Xiaosa Xu et al.   TRENDS IN PLANT SCIENCE

AQUA Cloning: A Versatile and Simple Enzyme-Free Cloning Approach

(2015) Hannes M. Beyer et al.   PLoS One

Plant proximity perception dynamically modulates hormone levels and sensitivity in Arabidopsis

(2014) Jordi Bou-Torrent et al.   JOURNAL OF EXPERIMENTAL BOTANY

Combinatorial Complexity in a Transcriptionally Centered Signaling Hub in Arabidopsis

(2014) Anne Pfeiffer et al.   Molecular Plant

Photoreceptor-mediated kin recognition in plants

(2014) María A. Crepy et al.   NEW PHYTOLOGIST

Phytochrome B Promotes Branching in Arabidopsis by Suppressing Auxin Signaling

(2014) S. Krishna Reddy et al.   PLANT PHYSIOLOGY

Phytochrome B Nuclear Bodies Respond to the Low Red to Far-Red Ratio and to the Reduced Irradiance of Canopy Shade in Arabidopsis

(2014) S. A. Trupkin et al.   PLANT PHYSIOLOGY

Cotyledon-Generated Auxin Is Required for Shade-Induced Hypocotyl Growth in Brassica rapa

(2014) C. Procko et al.   PLANT PHYSIOLOGY

Light intensity modulates the regulatory network of the shade avoidance response in Arabidopsis

(2014) M. Hersch et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Photoreceptor Signaling Networks in Plant Responses to Shade

(2013) Jorge J. Casal   Annual Review of Plant Biology

Auxin metabolism and homeostasis during plant development

(2013) K. Ljung   DEVELOPMENT

COP1 re-accumulates in the nucleus under shade

(2013) Manuel Pacín et al.   PLANT JOURNAL

Abscisic Acid Regulates Axillary Bud Outgrowth Responses to the Ratio of Red to Far-Red Light

(2013) S. K. Reddy et al.   PLANT PHYSIOLOGY

A Quartet of PIF bHLH Factors Provides a Transcriptionally Centered Signaling Hub That Regulates Seedling Morphogenesis through Differential Expression-Patterning of Shared Target Genes in Arabidopsis

(2013) Yu Zhang et al.   PLoS Genetics

Hormonal Interactions in the Regulation of Plant Development

(2012) Marleen Vanstraelen et al.   Annual Review of Cell and Developmental Biology

Linking photoreceptor excitation to changes in plant architecture

(2012) L. Li et al.   GENES & DEVELOPMENT

Diurnal Dependence of Growth Responses to Shade in Arabidopsis: Role of Hormone, Clock, and Light Signaling

(2012) Romina Sellaro et al.   Molecular Plant

A novel putative auxin carrier family regulates intracellular auxin homeostasis in plants

(2012) Elke Barbez et al.   NATURE

Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses

(2012) Eunkyoo Oh et al.   NATURE CELL BIOLOGY

A combinatorial TIR1/AFB–Aux/IAA co-receptor system for differential sensing of auxin

(2012) Luz Irina A Calderón Villalobos et al.   Nature Chemical Biology

Dynamic Antagonism between Phytochromes and PIF Family Basic Helix-Loop-Helix Factors Induces Selective Reciprocal Responses to Light and Shade in a Rapidly Responsive Transcriptional Network inArabidopsis

(2012) Pablo Leivar et al.   PLANT CELL

Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling

(2012) Patricia Hornitschek et al.   PLANT JOURNAL

Genome-wide binding-site analysis of REVOLUTA reveals a link between leaf patterning and light-mediated growth responses

(2012) Ronny Brandt et al.   PLANT JOURNAL

Stem Transcriptome Reveals Mechanisms to Reduce the Energetic Cost of Shade-Avoidance Responses in Tomato

(2012) J. I. Cagnola et al.   PLANT PHYSIOLOGY

Hypocotyl Transcriptome Reveals Auxin Regulation of Growth-Promoting Genes through GA-Dependent and -Independent Pathways

(2012) Elisabeth J. Chapman et al.   PLoS One

The photomorphogenic repressors COP1 and DET1: 20 years later

(2012) On Sun Lau et al.   TRENDS IN PLANT SCIENCE

Auxin conjugates: their role for plant development and in the evolution of land plants

(2011) Jutta Ludwig-Müller   JOURNAL OF EXPERIMENTAL BOTANY

Repression of shade-avoidance reactions by sunfleck induction of HY5 expression in Arabidopsis

(2011) Romina Sellaro et al.   PLANT JOURNAL

Cryptochrome 1 and phytochrome B control shade-avoidance responses in Arabidopsis via partially independent hormonal cascades

(2011) Mercedes M. Keller et al.   PLANT JOURNAL

Blue-light-mediated shade avoidance requires combined auxin and brassinosteroid action in Arabidopsis seedlings

(2011) Diederik H. Keuskamp et al.   PLANT JOURNAL

Genome-Wide Analysis of Light-Dependent Transcript Accumulation Patterns during Early Stages of Arabidopsis Seedling Deetiolation

(2011) F. Peschke et al.   PLANT PHYSIOLOGY

Conversion of tryptophan to indole-3-acetic acid by TRYPTOPHAN AMINOTRANSFERASES OF ARABIDOPSIS and YUCCAs in Arabidopsis

(2011) C. Won et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Perturbation of Indole-3-Butyric Acid Homeostasis by the UDP-Glucosyltransferase UGT74E2 Modulates Arabidopsis Architecture and Water Stress Tolerance

(2010) V. B. Tognetti et al.   PLANT CELL

Automated analysis of hypocotyl growth dynamics during shade avoidance in Arabidopsis

(2010) Benjamin Cole et al.   PLANT JOURNAL

Phytochrome Regulation of Branching in Arabidopsis

(2010) S. A. Finlayson et al.   PLANT PHYSIOLOGY

Light Quality-Mediated Petiole Elongation in Arabidopsis during Shade Avoidance Involves Cell Wall Modification by Xyloglucan Endotransglucosylase/Hydrolases

(2010) R. Sasidharan et al.   PLANT PHYSIOLOGY

Involvement of Auxin and Brassinosteroid in the Regulation of Petiole Elongation under the Shade

(2010) T. Kozuka et al.   PLANT PHYSIOLOGY

Auxin transport through PIN-FORMED 3 (PIN3) controls shade avoidance and fitness during competition

(2010) D. H. Keuskamp et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

PIFs: pivotal components in a cellular signaling hub

(2010) Pablo Leivar et al.   TRENDS IN PLANT SCIENCE

Mechanism of Auxin-Regulated Gene Expression in Plants

(2009) Elisabeth J. Chapman et al.   Annual Review of Genetics

Inhibition of the shade avoidance response by formation of non-DNA binding bHLH heterodimers

(2009) Patricia Hornitschek et al.   EMBO JOURNAL

Survival of the flexible: hormonal growth control and adaptation in plant development

(2009) Hanno Wolters et al.   NATURE REVIEWS GENETICS

Auxin and Ethylene Regulate Elongation Responses to Neighbor Proximity Signals Independent of Gibberellin and DELLA Proteins in Arabidopsis

(2009) R. Pierik et al.   PLANT PHYSIOLOGY

Ecological modulation of plant defense via phytochrome control of jasmonate sensitivity

(2009) J. E. Moreno et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Rapid Synthesis of Auxin via a New Tryptophan-Dependent Pathway Is Required for Shade Avoidance in Plants

(2008) Yi Tao et al.   CELL

Shade avoidance

(2008) Keara A. Franklin   NEW PHYTOLOGIST

The AtGenExpress hormone and chemical treatment data set: experimental design, data evaluation, model data analysis and data access

(2008) Hideki Goda et al.   PLANT JOURNAL