Spatial Regulation of the Gene Expression Response to Shade in Arabidopsis Seedlings

Position-Specific Gene Expression Analysis Using a Microgram Dissection Method Combined with On-Bead cDNA Library Construction

(2015) Tomoharu Kajiyama et al.   PLANT AND CELL PHYSIOLOGY

Plant proximity perception dynamically modulates hormone levels and sensitivity in Arabidopsis

(2014) Jordi Bou-Torrent et al.   JOURNAL OF EXPERIMENTAL BOTANY

The Art of Being Flexible: How to Escape from Shade, Salt, and Drought

(2014) Ronald Pierik et al.   PLANT PHYSIOLOGY

Cotyledon-Generated Auxin Is Required for Shade-Induced Hypocotyl Growth in Brassica rapa

(2014) C. Procko et al.   PLANT PHYSIOLOGY

The Shade Avoidance Syndrome in Arabidopsis: The Antagonistic Role of Phytochrome A and B Differentiates Vegetation Proximity and Canopy Shade

(2014) Jaime F. Martínez-García et al.   PLoS One

The BBX family of plant transcription factors

(2014) Sreeramaiah N. Gangappa et al.   TRENDS IN PLANT SCIENCE

Photoreceptor Signaling Networks in Plant Responses to Shade

(2013) Jorge J. Casal   Annual Review of Plant Biology

Transcription ofST2AEncoding A Sulfotransferase Family Protein That Is Involved in Jasmonic Acid Metabolism Is Controlled According to the Circadian Clock- and PIF4/PIF5-Mediated External Coincidence Mechanism inArabidopsis thaliana

(2013) Takafumi YAMASHINO et al.   BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY

The bHLH proteins BEE and BIM positively modulate the shade avoidance syndrome in Arabidopsis seedlings

(2013) Nicolás Cifuentes-Esquivel et al.   PLANT JOURNAL

A Quartet of PIF bHLH Factors Provides a Transcriptionally Centered Signaling Hub That Regulates Seedling Morphogenesis through Differential Expression-Patterning of Shared Target Genes in Arabidopsis

(2013) Yu Zhang et al.   PLoS Genetics

Gibberellin biosynthesis and its regulation

(2012) Peter Hedden et al.   BIOCHEMICAL JOURNAL

Linking photoreceptor excitation to changes in plant architecture

(2012) L. Li et al.   GENES & DEVELOPMENT

Regulation of Brassinosteroid Biosynthesis and InactivationF

(2012) Baolin Zhao et al.   Journal of Integrative Plant Biology

A competitive peptide inhibitor KIDARI negatively regulates HFR1 by forming nonfunctional heterodimers in Arabidopsis photomorphogenesis

(2012) Shin-Young Hong et al.   MOLECULES AND CELLS

Dynamic Antagonism between Phytochromes and PIF Family Basic Helix-Loop-Helix Factors Induces Selective Reciprocal Responses to Light and Shade in a Rapidly Responsive Transcriptional Network inArabidopsis

(2012) Pablo Leivar et al.   PLANT CELL

Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling

(2012) Patricia Hornitschek et al.   PLANT JOURNAL

g:Profiler—a web server for functional interpretation of gene lists (2011 update)

(2011) Jüri Reimand et al.   NUCLEIC ACIDS RESEARCH

Genomic Analysis of Circadian Clock-, Light-, and Growth-Correlated Genes Reveals PHYTOCHROME-INTERACTING FACTOR5 as a Modulator of Auxin Signaling in Arabidopsis

(2011) K. Nozue et al.   PLANT PHYSIOLOGY

Rapid, Organ-Specific Transcriptional Responses to Light Regulate Photomorphogenic Development in Dicot Seedlings

(2011) Y. Li et al.   PLANT PHYSIOLOGY

YUCCA Genes Are Expressed in Response to Leaf Adaxial-Abaxial Juxtaposition and Are Required for Leaf Margin Development

(2011) W. Wang et al.   PLANT PHYSIOLOGY

A Brief History of Phytochromes

(2010) Nathan C. Rockwell et al.   CHEMPHYSCHEM

Involvement of Auxin and Brassinosteroid in the Regulation of Petiole Elongation under the Shade

(2010) T. Kozuka et al.   PLANT PHYSIOLOGY

PIFs: pivotal components in a cellular signaling hub

(2010) Pablo Leivar et al.   TRENDS IN PLANT SCIENCE

Inhibition of the shade avoidance response by formation of non-DNA binding bHLH heterodimers

(2009) Patricia Hornitschek et al.   EMBO JOURNAL

Rapid Synthesis of Auxin via a New Tryptophan-Dependent Pathway Is Required for Shade Avoidance in Plants

(2008) Yi Tao et al.   CELL

Multiple Phytochrome-Interacting bHLH Transcription Factors Repress Premature Seedling Photomorphogenesis in Darkness

(2008) Pablo Leivar et al.   CURRENT BIOLOGY

Distinct Light-Initiated Gene Expression and Cell Cycle Programs in the Shoot Apex and Cotyledons of Arabidopsis

(2008) E. Lopez-Juez et al.   PLANT CELL

The Arabidopsis Phytochrome-Interacting Factor PIF7, Together with PIF3 and PIF4, Regulates Responses to Prolonged Red Light by Modulating phyB Levels

(2008) P. Leivar et al.   PLANT CELL

The Arabidopsis Homeodomain-leucine Zipper II gene family: diversity and redundancy

(2008) Angela Raffaella Ciarbelli et al.   PLANT MOLECULAR BIOLOGY