Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling

Diurnal Dependence of Growth Responses to Shade in Arabidopsis: Role of Hormone, Clock, and Light Signaling

(2012) Romina Sellaro et al.   Molecular Plant

Interactions between HLH and bHLH Factors Modulate Light-Regulated Plant Development

(2012) Yaqi Hao et al.   Molecular Plant

Photoconversion and Nuclear Trafficking Cycles Determine Phytochrome A's Response Profile to Far-Red Light

(2011) Julia Rausenberger et al.   CELL

PHYTOCHROME-INTERACTING FACTOR 4 and 5 (PIF4 and PIF5) Activate the Homeobox ATHB2 and Auxin-Inducible IAA29 Genes in the Coincidence Mechanism Underlying Photoperiodic Control of Plant Growth of Arabidopsis thaliana

(2011) Atsushi Kunihiro et al.   PLANT AND CELL PHYSIOLOGY

Genome-Wide Binding Site Analysis of FAR-RED ELONGATED HYPOCOTYL3 Reveals Its Novel Function in Arabidopsis Development

(2011) X. Ouyang et al.   PLANT CELL

TheArabidopsisYUCCA1 Flavin Monooxygenase Functions in the Indole-3-Pyruvic Acid Branch of Auxin Biosynthesis

(2011) Anna N. Stepanova et al.   PLANT CELL

Improved protein-binding microarrays for the identification of DNA-binding specificities of transcription factors

(2011) Marta Godoy et al.   PLANT JOURNAL

The shade avoidance syndrome in Arabidopsis: a fundamental role for atypical basic helix-loop-helix proteins as transcriptional cofactors

(2011) Anahit Galstyan et al.   PLANT JOURNAL

Cryptochrome 1 and phytochrome B control shade-avoidance responses in Arabidopsis via partially independent hormonal cascades

(2011) Mercedes M. Keller et al.   PLANT JOURNAL

Blue-light-mediated shade avoidance requires combined auxin and brassinosteroid action in Arabidopsis seedlings

(2011) Diederik H. Keuskamp et al.   PLANT JOURNAL

Genomic Analysis of Circadian Clock-, Light-, and Growth-Correlated Genes Reveals PHYTOCHROME-INTERACTING FACTOR5 as a Modulator of Auxin Signaling in Arabidopsis

(2011) K. Nozue et al.   PLANT PHYSIOLOGY

Green Light Induces Shade Avoidance Symptoms

(2011) T. Zhang et al.   PLANT PHYSIOLOGY

PHYTOCHROME-INTERACTING FACTOR 4 (PIF4) regulates auxin biosynthesis at high temperature

(2011) K. A. Franklin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Conversion of tryptophan to indole-3-acetic acid by TRYPTOPHAN AMINOTRANSFERASES OF ARABIDOPSIS and YUCCAs in Arabidopsis

(2011) C. Won et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The main auxin biosynthesis pathway in Arabidopsis

(2011) K. Mashiguchi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Light receptor action is critical for maintaining plant biomass at warm ambient temperatures

(2010) Julia Foreman et al.   PLANT JOURNAL

AtBBX21 and COP1 genetically interact in the regulation of shade avoidance

(2010) Carlos D. Crocco et al.   PLANT JOURNAL

Automated analysis of hypocotyl growth dynamics during shade avoidance in Arabidopsis

(2010) Benjamin Cole et al.   PLANT JOURNAL

Cryptochrome as a Sensor of the Blue/Green Ratio of Natural Radiation in Arabidopsis

(2010) Romina Sellaro et al.   PLANT PHYSIOLOGY

Involvement of Auxin and Brassinosteroid in the Regulation of Petiole Elongation under the Shade

(2010) T. Kozuka et al.   PLANT PHYSIOLOGY

Auxin transport through PIN-FORMED 3 (PIN3) controls shade avoidance and fitness during competition

(2010) D. H. Keuskamp et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

High Temperature-Mediated Adaptations in Plant Architecture Require the bHLH Transcription Factor PIF4

(2009) Maria A. Koini et al.   CURRENT BIOLOGY

Inhibition of the shade avoidance response by formation of non-DNA binding bHLH heterodimers

(2009) Patricia Hornitschek et al.   EMBO JOURNAL

Phytochrome functions in Arabidopsis development

(2009) K. A. Franklin et al.   JOURNAL OF EXPERIMENTAL BOTANY

Universal protein-binding microarrays for the comprehensive characterization of the DNA-binding specificities of transcription factors

(2009) Michael F Berger et al.   Nature Protocols

Genome-Wide Analysis of Genes Targeted by PHYTOCHROME INTERACTING FACTOR 3-LIKE5 during Seed Germination in Arabidopsis

(2009) E. Oh et al.   PLANT CELL

The Arabidopsis B-Box Zinc Finger Family

(2009) R. Khanna et al.   PLANT CELL

Illuminated behaviour: phytochrome as a key regulator of light foraging and plant anti-herbivore defence

(2009) CARLOS L. BALLARÉ   PLANT CELL AND ENVIRONMENT

Hormonal regulation of temperature-induced growth in Arabidopsis

(2009) Jon A. Stavang et al.   PLANT JOURNAL

Phytochrome interacting factors 4 and 5 redundantly limit seedling de-etiolation in continuous far-red light

(2009) Séverine Lorrain et al.   PLANT JOURNAL

ATHB4, a regulator of shade avoidance, modulates hormone response in Arabidopsis seedlings

(2009) Céline Sorin et al.   PLANT JOURNAL

Phytochromes promote seedling light responses by inhibiting four negatively-acting phytochrome-interacting factors

(2009) J. Shin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Systems Approach Reveals Regulatory Circuitry for Arabidopsis Trichome Initiation by the GL3 and GL1 Selectors

(2009) Kengo Morohashi et al.   PLoS Genetics

Rapid Synthesis of Auxin via a New Tryptophan-Dependent Pathway Is Required for Shade Avoidance in Plants

(2008) Yi Tao et al.   CELL

Multiple Phytochrome-Interacting bHLH Transcription Factors Repress Premature Seedling Photomorphogenesis in Darkness

(2008) Pablo Leivar et al.   CURRENT BIOLOGY

Shade avoidance

(2008) Keara A. Franklin   NEW PHYTOLOGIST

Requirement of B2-Type Cyclin-Dependent Kinases for Meristem Integrity in Arabidopsis thaliana

(2008) S. U. Andersen et al.   PLANT CELL

Transposing phytochrome into the nucleus

(2008) Christian Fankhauser et al.   TRENDS IN PLANT SCIENCE

Model-based Analysis of ChIP-Seq (MACS)

(2008) Yong Zhang et al.   GENOME BIOLOGY