Genome-wide SNP loci reveal novel insights into koala (Phascolarctos cinereus) population variability across its range

netview p: a network visualization tool to unravel complex population structure using genome-wide SNPs

(2015) Eike J. Steinig et al.   Molecular Ecology Resources

Genome-wide SNPs lead to strong signals of geographic structure and relatedness patterns in the major arbovirus vector, Aedes aegypti

(2014) Gordana Rašić et al.   BMC GENOMICS

Nuclear and mitochondrial genetic structure in the Eurasian beaver (Castor fiber) - implications for future reintroductions

(2014) Helen Senn et al.   Evolutionary Applications

Genotyping by sequencing resolves shallow population structure to inform conservation of Chinook salmon (Oncorhynchus tshawytscha)

(2014) Wesley A. Larson et al.   Evolutionary Applications

MHC class II diversity of koala (Phascolarctos cinereus) populations across their range

(2014) Q Lau et al.   HEREDITY

Single Nucleotide Polymorphism (SNP) Variation of Wolves (Canis lupus) in Southeast Alaska and Comparison with Wolves, Dogs, and Coyotes in North America

(2014) Matthew A. Cronin et al.   JOURNAL OF HEREDITY

Molecular Phylogeny and SNP Variation of Polar Bears (Ursus maritimus), Brown Bears (U. arctos), and Black Bears (U. americanus) Derived from Genome Sequences

(2014) Matthew A. Cronin et al.   JOURNAL OF HEREDITY

Genome-wide SNP analysis reveals a genetic basis for sea-age variation in a wild population of Atlantic salmon (Salmo salar)

(2014) Susan E. Johnston et al.   MOLECULAR ECOLOGY

Trade-offs and utility of alternative RADseq methods: Reply to Puritzet al.

(2014) Kimberly R. Andrews et al.   MOLECULAR ECOLOGY

Genome-wide single-generation signatures of local selection in the panmictic European eel

(2014) J. M. Pujolar et al.   MOLECULAR ECOLOGY

SimRAD: an R package for simulation-based prediction of the number of loci expected in RADseq and similar genotyping by sequencing approaches

(2014) Olivier Lepais et al.   Molecular Ecology Resources

High-throughput sequencing reveals inbreeding depression in a natural population

(2014) J. I. Hoffman et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Species Delimitation using Genome-Wide SNP Data

(2014) Adam D. Leaché et al.   SYSTEMATIC BIOLOGY

Advances and limits of using population genetics to understand local adaptation

(2014) Peter Tiffin et al.   TRENDS IN ECOLOGY & EVOLUTION

Extinction in Eden: identifying the role of climate change in the decline of the koala in south-eastern NSW

(2014) Daniel Lunney et al.   WILDLIFE RESEARCH

Development of 14 microsatellite markers in the Queensland koala (Phascolarctos cinereus adustus) using next generation sequencing technology

(2014) Christina T. Ruiz-Rodriguez et al.   Conservation Genetics Resources

Background Selection as Baseline for Nucleotide Variation across the Drosophila Genome

(2014) Josep M. Comeron   PLoS Genetics

Genetic diversity in natural and introduced island populations of koalas in Queensland

(2013) Kristen E. Lee et al.   AUSTRALIAN JOURNAL OF ZOOLOGY

Comparison of the effectiveness of microsatellites and SNP panels for genetic identification, traceability and assessment of parentage in an inbred Angus herd

(2013) María E. Fernández et al.   GENETICS AND MOLECULAR BIOLOGY

Estimating genome-wide heterozygosity: effects of demographic history and marker type

(2013) J M Miller et al.   HEREDITY

Genome-wide signatures of population bottlenecks and diversifying selection in European wolves

(2013) M Pilot et al.   HEREDITY

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Characterizing genic and nongenic molecular markers: comparison of microsatellites and SNPs

(2013) Jacquelin DeFaveri et al.   Molecular Ecology Resources

Identification of a Sex-Linked SNP Marker in the Salmon Louse (Lepeophtheirus salmonis) Using RAD Sequencing

(2013) Stephen N. Carmichael et al.   PLoS One

Variation of cats under domestication: genetic assignment of domestic cats to breeds and worldwide random-bred populations

(2012) J. D. Kurushima et al.   ANIMAL GENETICS

Historically low mitochondrial DNA diversity in koalas (Phascolarctos cinereus)

(2012) Kyriakos Tsangaras et al.   BMC GENETICS

Characterisation of four major histocompatibility complex class II genes of the koala (Phascolarctos cinereus)

(2012) Quintin Lau et al.   IMMUNOGENETICS

Translocation of overabundant species: Implications for translocated individuals

(2012) Desley A. Whisson et al.   JOURNAL OF WILDLIFE MANAGEMENT

One Hundred Twenty Years of Koala Retrovirus Evolution Determined from Museum Skins

(2012) M. C. Avila-Arcos et al.   MOLECULAR BIOLOGY AND EVOLUTION

Genome-wide single nucleotide polymorphism analysis reveals recent genetic introgression from domestic pigs into Northwest European wild boar populations

(2012) D. J. GOEDBLOED et al.   MOLECULAR ECOLOGY

Identification of Novel Single Nucleotide Polymorphisms (SNPs) in Deer (Odocoileus spp.) Using the BovineSNP50 BeadChip

(2012) Gwilym D. Haynes et al.   PLoS One

Estimates of Genetic Differentiation Measured by FST Do Not Necessarily Require Large Sample Sizes When Using Many SNP Markers

(2012) Eva-Maria Willing et al.   PLoS One

Polar and brown bear genomes reveal ancient admixture and demographic footprints of past climate change

(2012) W. Miller et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genetic change for earlier migration timing in a pink salmon population

(2012) R. P. Kovach et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Harnessing genomics for delineating conservation units

(2012) W. Chris Funk et al.   TRENDS IN ECOLOGY & EVOLUTION

Predicting the Probability of Outbreeding Depression

(2011) RICHARD FRANKHAM et al.   CONSERVATION BIOLOGY

A Genome-wide SNP Genotyping Array Reveals Patterns of Global and Repeated Species-Pair Divergence in Sticklebacks

(2011) Felicity C. Jones et al.   CURRENT BIOLOGY

Genomic toolboxes for conservation biologists

(2011) Francesco Angeloni et al.   Evolutionary Applications

A genome-wide perspective on the evolutionary history of enigmatic wolf-like canids

(2011) Bridgett M. vonHoldt et al.   GENOME RESEARCH

A simple route to single-nucleotide polymorphisms in a nonmodel species: identification and characterization of SNPs in the Artic ringed seal (Pusa hispida hispida)

(2011) MORTEN TANGE OLSEN et al.   Molecular Ecology Resources

Comparison ofFSToutlier tests for SNP loci under selection

(2011) SHAWN R. NARUM et al.   Molecular Ecology Resources

Genome-wide genetic marker discovery and genotyping using next-generation sequencing

(2011) John W. Davey et al.   NATURE REVIEWS GENETICS

Drought-driven change in wildlife distribution and numbers: a case study of koalas in south west Queensland

(2011) Leonie Seabrook et al.   WILDLIFE RESEARCH

Stacks : Building and Genotyping Loci De Novo From Short-Read Sequences

(2011) Julian M. Catchen et al.   G3-Genes Genomes Genetics

Genetic analysis reveals a distinct and highly diverse koala (Phascolarctos cinereus) population in South Gippsland, Victoria, Australia

(2011) Tristan Lee et al.   AUSTRALIAN MAMMALOGY

Estimation of census and effective population sizes: the increasing usefulness of DNA-based approaches

(2010) Gordon Luikart et al.   CONSERVATION GENETICS

Mito-nuclear discordance in the degree of population differentiation in a marine goby

(2010) M H D Larmuseau et al.   HEREDITY

Rhh: an R extension for estimating multilocus heterozygosity and heterozygosity-heterozygosity correlation

(2010) JUSSI S. ALHO et al.   Molecular Ecology Resources

Genome-wide SNP and haplotype analyses reveal a rich history underlying dog domestication

(2010) Bridgett M. vonHoldt et al.   NATURE

NanoDrop Microvolume Quantitation of Nucleic Acids

(2010) Philippe Desjardins et al.   Jove-Journal of Visualized Experiments

Spatiotemporal dynamics of habitat use by koalas: the checkerboard model

(2009) William A. H. Ellis et al.   BEHAVIORAL ECOLOGY AND SOCIOBIOLOGY

An examination of positive selection and changing effective population size in Angus and Holstein cattle populations (Bos taurus) using a high density SNP genotyping platform and the contribution of ancient polymorphism to genomic diversity in Domestic cattle

(2009) Sean MacEachern et al.   BMC GENOMICS

Genetic variation and structuring in the threatened koala populations of Southeast Queensland

(2009) Kristen E. Lee et al.   CONSERVATION GENETICS

Linkage Disequilibrium and Demographic History of Wild and Domestic Canids

(2009) M. M. Gray et al.   GENETICS

Origin and status of the Great Lakes wolf

(2009) STEPHAN KOBLMÜLLER et al.   MOLECULAR ECOLOGY

Subspecies-informative SNP assays for evaluating introgression between native golden trout and introduced rainbow trout

(2009) MOLLY R. STEPHENS et al.   Molecular Ecology Resources

A Genome Wide Survey of SNP Variation Reveals the Genetic Structure of Sheep Breeds

(2009) James W. Kijas et al.   PLoS One

Genome-Wide Survey of SNP Variation Uncovers the Genetic Structure of Cattle Breeds

(2009) et al.   SCIENCE

adegenet: a R package for the multivariate analysis of genetic markers

(2008) Thibaut Jombart   BIOINFORMATICS

LOSITAN: A workbench to detect molecular adaptation based on a Fst-outlier method

(2008) Tiago Antao et al.   BMC BIOINFORMATICS

A Genome-Scan Method to Identify Selected Loci Appropriate for Both Dominant and Codominant Markers: A Bayesian Perspective

(2008) M. Foll et al.   GENETICS

NCBI BLAST: a better web interface

(2008) M. Johnson et al.   NUCLEIC ACIDS RESEARCH