Characterizing genic and nongenic molecular markers: comparison of microsatellites and SNPs

Isolation and Characterization of 13 New Nine-Spined Stickleback,Pungitius pungitius, Microsatellites Located Nearby Candidate Genes for Behavioural Variation

(2012) Veronika N. Laine et al.   ANNALES ZOOLOGICI FENNICI

Gene-Based Single Nucleotide Polymorphism Markers for Genetic and Association Mapping in Common Bean

(2012) Carlos H Galeano et al.   BMC GENETICS

Molecular evolutionary and population genomic analysis of the nine-spined stickleback using a modified restriction-site-associated DNA tag approach

(2012) Matthieu Bruneaux et al.   MOLECULAR ECOLOGY

Dynamics of introgressive hybridization assessed by SNP population genomics of coding genes in stocked brook charr (Salvelinus fontinalis)

(2012) FABIEN C. LAMAZE et al.   MOLECULAR ECOLOGY

Genome divergence during evolutionary diversification as revealed in replicate lake-stream stickleback population pairs

(2012) MARIUS ROESTI et al.   MOLECULAR ECOLOGY

Validation and comparison of microsatellite markers derived from Senegalese sole (Solea senegalensis, Kaup) genomic and expressed sequence tags libraries

(2012) M. J. MOLINA-LUZÓN et al.   Molecular Ecology Resources

The genomic basis of adaptive evolution in threespine sticklebacks

(2012) Felicity C. Jones et al.   NATURE

Comparison of SNPs and microsatellites for assessing the genetic structure of chicken populations

(2011) C. Gärke et al.   ANIMAL GENETICS

Validation of single nucleotide polymorphism (SNP) markers from an immune Expressed Sequence Tag (EST) turbot, Scophthalmus maximus, database

(2011) Manuel Vera et al.   AQUACULTURE

GLOBAL ANALYSIS OF GENES INVOLVED IN FRESHWATER ADAPTATION IN THREESPINE STICKLEBACKS (GASTEROSTEUS ACULEATUS)

(2011) Jacquelin DeFaveri et al.   EVOLUTION

Genomic toolboxes for conservation biologists

(2011) Francesco Angeloni et al.   Evolutionary Applications

Heterozygosity-fitness correlations in the gilthead sea bream Sparus aurata using microsatellite loci from unknown and gene-rich genomic locations

(2011) Y. J. Borrell et al.   JOURNAL OF FISH BIOLOGY

The impact of next-generation sequencing on genomics

(2011) Jun Zhang et al.   Journal of Genetics and Genomics

Comparative study on the population genetics of the red algae Furcellaria lumbricalis occupying different salinity conditions

(2011) Kirsi Kostamo et al.   MARINE BIOLOGY

Heterozygosity and survival in blue tits (Cyanistes caeruleus): contrasting effects of presumably functional and neutral loci

(2011) JUANITA OLANO-MARIN et al.   MOLECULAR ECOLOGY

Evaluating SNP ascertainment bias and its impact on population assignment in Atlantic cod,Gadus morhua

(2011) IAN R. BRADBURY et al.   Molecular Ecology Resources

Comparison of SNPs and microsatellites for fine-scale application of genetic stock identification of Chinook salmon in the Columbia River Basin

(2011) J. E. HESS et al.   Molecular Ecology Resources

An empirical comparison of SNPs and microsatellites for parentage and kinship assignment in a wild sockeye salmon (Oncorhynchus nerka) population

(2011) LORENZ HAUSER et al.   Molecular Ecology Resources

Application of SNPs for population genetics of nonmodel organisms: new opportunities and challenges

(2011) S. J. HELYAR et al.   Molecular Ecology Resources

Single-nucleotide polymorphism (SNP) discovery and applications of SNP genotyping in nonmodel organisms

(2011) J. E. SEEB et al.   Molecular Ecology Resources

Genome-wide genetic marker discovery and genotyping using next-generation sequencing

(2011) John W. Davey et al.   NATURE REVIEWS GENETICS

Fine-Scale Analysis Reveals Cryptic Landscape Genetic Structure in Desert Tortoises

(2011) Emily K. Latch et al.   PLoS One

A comparison of SNP and STR loci for delineating population structure and performing individual genetic assignment

(2010) Kevin A Glover et al.   BMC GENETICS

Utility of sequenced genomes for microsatellite marker development in non-model organisms: a case study of functionally important genes in nine-spined sticklebacks (Pungitius pungitius)

(2010) Takahito Shikano et al.   BMC GENOMICS

Single nucleotide polymorphisms in chum salmon (Oncorhynchus keta) mitochondrial DNA derived from restriction site haplotype information

(2010) M. R. Garvin et al.   GENOME

Multi-locus inference of population structure: a comparison between single nucleotide polymorphisms and microsatellites

(2010) R J Haasl et al.   HEREDITY

Microsatellites and single nucleotide polymorphisms in avian hybrid identification: a comparative case study

(2010) Ülo Väli et al.   JOURNAL OF AVIAN BIOLOGY

Variation in anonymous and EST-microsatellites suggests adaptive population divergence in turbot

(2010) R Vilas et al.   MARINE ECOLOGY PROGRESS SERIES

Identification of Local- and Habitat-Dependent Selection: Scanning Functionally Important Genes in Nine-Spined Sticklebacks (Pungitius pungitius)

(2010) T. Shikano et al.   MOLECULAR BIOLOGY AND EVOLUTION

A High Incidence of Selection on Physiologically Important Genes in the Three-Spined Stickleback, Gasterosteus aculeatus

(2010) Y. Shimada et al.   MOLECULAR BIOLOGY AND EVOLUTION

Development of single nucleotide polymorphism markers in Theobroma cacao and comparison to simple sequence repeat markers for genotyping of Cameroon clones

(2010) Donald S. Livingstone et al.   MOLECULAR BREEDING

Do microsatellites reflect genome-wide genetic diversity in natural populations? A comment on Väliet al.(2008)

(2010) MARCUS LJUNGQVIST et al.   MOLECULAR ECOLOGY

On the use of large marker panels to estimate inbreeding and relatedness: empirical and simulation studies of a pedigreed zebra finch population typed at 771 SNPs

(2010) ANNA W. SANTURE et al.   MOLECULAR ECOLOGY

Towards identifying genes underlying ecologically relevant traits in Arabidopsis thaliana

(2010) Joy Bergelson et al.   NATURE REVIEWS GENETICS

Genomics and the future of conservation genetics

(2010) Fred W. Allendorf et al.   NATURE REVIEWS GENETICS

Adaptation genomics: the next generation

(2010) Jessica Stapley et al.   TRENDS IN ECOLOGY & EVOLUTION

Population Genomics of Parallel Adaptation in Threespine Stickleback using Sequenced RAD Tags

(2010) Paul A. Hohenlohe et al.   PLoS Genetics

Frontiers in identifying conservation units: from neutral markers to adaptive genetic variation

(2009) B. Gebremedhin et al.   ANIMAL CONSERVATION

A multifaceted approach to species conservation

(2009) K. A. Crandall   ANIMAL CONSERVATION

A flexible whole-genome microarray for transcriptomics in three-spine stickleback (Gasterosteus aculeatus)

(2009) Erica H Leder et al.   BMC GENOMICS

Comparative Performance of Single Nucleotide Polymorphism and Microsatellite Markers for Population Genetic Analysis

(2009) Brad S. Coates et al.   JOURNAL OF HEREDITY

Comparing geographical genetic differentiation between candidate and noncandidate loci for adaptation strengthens support for parallel ecological divergence in the marine snailLittorina saxatilis

(2009) J. GALINDO et al.   MOLECULAR ECOLOGY

Population genomics of marine fishes: identifying adaptive variation in space and time

(2009) EINAR E. NIELSEN et al.   MOLECULAR ECOLOGY

Divergent selection and heterogeneous genomic divergence

(2009) PATRIK NOSIL et al.   MOLECULAR ECOLOGY

Assessing statistical power of SNPs for population structure and conservation studies

(2009) PHILLIP A. MORIN et al.   Molecular Ecology Resources

Inferring weak population structure with the assistance of sample group information

(2009) MELISSA J. HUBISZ et al.   Molecular Ecology Resources

Utility of EST-Derived SSRs as Population Genetics Markers in a Beetle

(2008) Kyung Seok Kim et al.   JOURNAL OF HEREDITY

To what extent do microsatellite markers reflect genome-wide genetic diversity in natural populations?

(2008) ÜLO VÄLI et al.   MOLECULAR ECOLOGY

Landscape genetic analyses reveal cryptic population structure and putative selection gradients in a large-scale estuarine environment

(2008) R. J. SCOTT McCAIRNS et al.   MOLECULAR ECOLOGY

Genetic basis of fitness differences in natural populations

(2008) Hans Ellegren et al.   NATURE

Detecting genetic responses to environmental change

(2008) Ary A. Hoffmann et al.   NATURE REVIEWS GENETICS

Number of Alleles as a Predictor of the Relative Assignment Accuracy of Short Tandem Repeat (STR) and Single-Nucleotide-Polymorphism (SNP) Baselines for Chum Salmon

(2008) Christian T. Smith et al.   TRANSACTIONS OF THE AMERICAN FISHERIES SOCIETY

Mitochondrial DNA phylogeography of the three-spined stickleback (Gasterosteus aculeatus) in Europe—Evidence for multiple glacial refugia

(2007) H.S. Mäkinen et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION