Monitoring and managing microbes in aquaculture - Towards a sustainable industry

Vibrio anguillarum Is Genetically and Phenotypically Unaffected by Long-Term Continuous Exposure to the Antibacterial Compound Tropodithietic Acid

(2016) Bastian Barker Rasmussen et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Phaeobacter inhibens as probiotic bacteria in non-axenic Artemia and algae cultures

(2016) Torben Grotkjær et al.   AQUACULTURE

Bacterial influence on alkenones in live microalgae

(2016) Einat Segev et al.   JOURNAL OF PHYCOLOGY

Mode of action and resistance studies unveil new roles for tropodithietic acid as an anticancer agent and the γ-glutamyl cycle as a proton sink

(2016) Maxwell Z. Wilson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Isolation of TDA-producing Phaeobacter strains from sea bass larval rearing units and their probiotic effect against pathogenic Vibrio spp. in Artemia cultures

(2016) Torben Grotkjær et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Metabolic Network Modeling of Microbial Interactions in Natural and Engineered Environmental Systems

(2016) Octavio Perez-Garcia et al.   Frontiers in Microbiology

Microbial metagenomics in the Baltic Sea: Recent advancements and prospects for environmental monitoring

(2015) Karolina Ininbergs et al.   AMBIO

Influence of Iron on Production of the Antibacterial Compound Tropodithietic Acid and Its Noninhibitory Analog in Phaeobacter inhibens

(2015) Paul W. D'Alvise et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Metabolic dependencies drive species co-occurrence in diverse microbial communities

(2015) Aleksej Zelezniak et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

pH levels drive bacterial community structure in sediments of the Qiantang River as determined by 454 pyrosequencing

(2015) Shuai Liu et al.   Frontiers in Microbiology

Comparing the effects of high vs. low nitrate on the health, performance, and welfare of juvenile rainbow trout Oncorhynchus mykiss within water recirculating aquaculture systems

(2014) John Davidson et al.   AQUACULTURAL ENGINEERING

Dietary greenhouse gas emissions of meat-eaters, fish-eaters, vegetarians and vegans in the UK

(2014) Peter Scarborough et al.   CLIMATIC CHANGE

Functional Tradeoffs Underpin Salinity-Driven Divergence in Microbial Community Composition

(2014) Chris L. Dupont et al.   PLoS One

Application of vaccines and dietary supplements in aquaculture: possibilities and challenges

(2014) Einar Ringø et al.   REVIEWS IN FISH BIOLOGY AND FISHERIES

Bacillus sp. LT3 improves the survival of gnotobiotic brine shrimp (Artemia franciscana) larvae challenged with Vibrio campbellii by enhancing the innate immune response and by decreasing the activity of shrimp-associated vibrios

(2014) Yufeng Niu et al.   VETERINARY MICROBIOLOGY

Quorum quenching bacteria Bacillus sp. QSI-1 protect zebrafish (Danio rerio) from Aeromonas hydrophila infection

(2014) Weihua Chu et al.   Scientific Reports

Teleost microbiomes: the state of the art in their characterization, manipulation and importance in aquaculture and fisheries

(2014) Martin S. Llewellyn et al.   Frontiers in Microbiology

Protection of cod larvae from vibriosis by Phaeobacter spp.: A comparison of strains and introduction times

(2013) Paul W. D'Alvise et al.   AQUACULTURE

Antimicrobial use in aquaculture re-examined: its relevance to antimicrobial resistance and to animal and human health

(2013) Felipe C. Cabello et al.   ENVIRONMENTAL MICROBIOLOGY

Genomics in marine monitoring: New opportunities for assessing marine health status

(2013) Sarah J. Bourlat et al.   MARINE POLLUTION BULLETIN

Microbial composition affects the functioning of estuarine sediments

(2012) Heather E Reed et al.   ISME Journal

Bacterial diversity, community structure and potential growth rates along an estuarine salinity gradient

(2012) Barbara J Campbell et al.   ISME Journal

Phaeobacter gallaeciensis Reduces Vibrio anguillarum in Cultures of Microalgae and Rotifers, and Prevents Vibriosis in Cod Larvae

(2012) Paul W. D’Alvise et al.   PLoS One

Simultaneous Detection of Multiple Fish Pathogens Using a Naked-Eye Readable DNA Microarray

(2012) Chin-I Chang et al.   SENSORS

Resistance and Tolerance to Tropodithietic Acid, an Antimicrobial in Aquaculture, Is Hard To Select

(2011) Cisse Hedegaard Porsby et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Abnormal swimming behavior and increased deformities in rainbow trout Oncorhynchus mykiss cultured in low exchange water recirculating aquaculture systems

(2011) John Davidson et al.   AQUACULTURAL ENGINEERING

Transitions in bacterial communities along the 2000 km salinity gradient of the Baltic Sea

(2011) Daniel PR Herlemann et al.   ISME Journal

Rapid detection and identification of viral and bacterial fish pathogens using a DNA array-based multiplex assay

(2011) B Lievens et al.   JOURNAL OF FISH DISEASES

A sensing array of radically coupled genetic ‘biopixels’

(2011) Arthur Prindle et al.   NATURE

The Jekyll-and-Hyde chemistry of Phaeobacter gallaeciensis

(2011) Mohammad R. Seyedsayamdost et al.   Nature Chemistry

The current status and future focus of probiotic and prebiotic applications for salmonids

(2010) Daniel L. Merrifield et al.   AQUACULTURE

Microbial diversity of biological filters in recirculating aquaculture systems

(2010) Harold J Schreier et al.   CURRENT OPINION IN BIOTECHNOLOGY

The impact of reduced pH on the microbial community of the coral Acropora eurystoma

(2010) Dalit Meron et al.   ISME Journal

“Green water” microalgae: the leading sector in world aquaculture

(2010) Amir Neori   JOURNAL OF APPLIED PHYCOLOGY

Phylogenetic characterization of the heterotrophic bacterial communities inhabiting a marine recirculating aquaculture system

(2009) L. Michaud et al.   JOURNAL OF APPLIED MICROBIOLOGY

The ALEX CHIP—Development of a DNA chip for identification and monitoring of Alexandrium

(2007) Christine Gescher et al.   HARMFUL ALGAE