Identification of fibrillogenic regions in human triosephosphate isomerase

Mechanisms of amyloid fibril formation

(2015) N. V. Dovidchenko et al.   BIOCHEMISTRY-MOSCOW

FISH Amyloid – a new method for finding amyloidogenic segments in proteins based on site specific co-occurence of aminoacids

(2014) Pawel Gasior et al.   BMC BIOINFORMATICS

New Insight into Amyloid Fibril Formation of Hen Egg White Lysozyme Using a Two-Step Temperature-Dependent FTIR Approach

(2014) Ye Zou et al.   JOURNAL OF PHYSICAL CHEMISTRY B

How to Get Insight into Amyloid Structure and Formation from Infrared Spectroscopy

(2014) Sean D. Moran et al.   Journal of Physical Chemistry Letters

The amyloid state and its association with protein misfolding diseases

(2014) Tuomas P. J. Knowles et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

PASTA 2.0: an improved server for protein aggregation prediction

(2014) Ian Walsh et al.   NUCLEIC ACIDS RESEARCH

Distinct β-Sheet Structure in Protein Aggregates Determined by ATR–FTIR Spectroscopy

(2013) Bhavana Shivu et al.   BIOCHEMISTRY

Effects of environmental factors on MSP21–25 aggregation indicate the roles of hydrophobic and electrostatic interactions in the aggregation process

(2013) Xuecheng Zhang et al.   EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS

Effect of Urea Concentration on Aggregation of Amyloidogenic Hexapeptides (NFGAIL)

(2013) Zhuowei Cai et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Modelling amyloid fibril formation kinetics: mechanisms of nucleation and growth

(2013) J E Gillam et al.   JOURNAL OF PHYSICS-CONDENSED MATTER

A Consensus Method for the Prediction of ‘Aggregation-Prone’ Peptides in Globular Proteins

(2013) Antonios C. Tsolis et al.   PLoS One

Different contribution of conserved amino acids to the global properties of triosephosphate isomerases

(2013) Yolanda Aguirre et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Detailed Analysis of the Energy Barriers for Amyloid Fibril Growth

(2012) Alexander K. Buell et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Multiple Roles of Heparin in the Aggregation of p25α

(2012) Søren Bang Nielsen et al.   JOURNAL OF MOLECULAR BIOLOGY

The Transthyretin Amyloidoses: From Delineating the Molecular Mechanism of Aggregation Linked to Pathology to a Regulatory-Agency-Approved Drug

(2012) Steven M. Johnson et al.   JOURNAL OF MOLECULAR BIOLOGY

Amyloid-Like Fibril Formation by PolyQ Proteins: A Critical Balance between the PolyQ Length and the Constraints Imposed by the Host Protein

(2012) Natacha Scarafone et al.   PLoS One

Amyloid Precursor Protein Processing and Alzheimer's Disease

(2011) Richard J. O'Brien et al.   Annual Review of Neuroscience

Coarse-grained models for protein aggregation

(2011) Chun Wu et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Mechanisms of amyloid fibril formation - focus on domain-swapping

(2011) Eva Žerovnik et al.   FEBS Journal

Metastability of Native Proteins and the Phenomenon of Amyloid Formation

(2011) Andrew J. Baldwin et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

New Scenarios of Protein Folding Can Occur on the Ribosome

(2011) Edward P. O’Brien et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Large Proteins Have a Great Tendency to Aggregate but a Low Propensity to Form Amyloid Fibrils

(2011) Hassan Ramshini et al.   PLoS One

Multidimensional Structure-Activity Relationship of a Protein in Its Aggregated States

(2010) Lei Wang et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Molecular mechanism of Thioflavin-T binding to amyloid fibrils

(2010) Matthew Biancalana et al.   BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS

Insights into the structural properties of d-serine dehydratase from Saccharomyces cerevisiae: An FT-IR spectroscopic and in silico approach

(2010) Maurizio Baldassarre et al.   BIOCHIMIE

Cotranslational Folding Increases GFP Folding Yield

(2010) Krastyu G. Ugrinov et al.   BIOPHYSICAL JOURNAL

Transient Tertiary Structure Formation within the Ribosome Exit Port

(2010) Edward P. O’Brien et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Exploring the sequence determinants of amyloid structure using position-specific scoring matrices

(2010) Sebastian Maurer-Stroh et al.   NATURE METHODS

The 8 and 5 kDa Fragments of Plasma Gelsolin Form Amyloid Fibrils by a Nucleated Polymerization Mechanism, while the 68 kDa Fragment Is Not Amyloidogenic

(2009) James P. Solomon et al.   BIOCHEMISTRY

FoldAmyloid: a method of prediction of amyloidogenic regions from protein sequence

(2009) S. O. Garbuzynskiy et al.   BIOINFORMATICS

Multistep Aggregation Pathway of Human Interleukin-1 Receptor Antagonist: Kinetic, Structural, and Morphological Characterization

(2009) Sampathkumar Krishnan et al.   BIOPHYSICAL JOURNAL

Amyloid-dependent triosephosphate isomerase nitrotyrosination induces glycation and tau fibrillation

(2009) Francesc X. Guix et al.   BRAIN

“Native-like aggregation” of the acylphosphatase from Sulfolobus solfataricus and its biological implications

(2009) Francesco Bemporad et al.   FEBS LETTERS

The Common Architecture of Cross-β Amyloid

(2009) Thomas R. Jahn et al.   JOURNAL OF MOLECULAR BIOLOGY

Amyloidogenic sequences in native protein structures

(2009) Susan Tzotzos et al.   PROTEIN SCIENCE

The structure of protein evolution and the evolution of protein structure

(2008) Richard A Goldstein   CURRENT OPINION IN STRUCTURAL BIOLOGY

Between-Species Variation in the Kinetic Stability of TIM Proteins Linked to Solvation-Barrier Free Energies

(2008) Miguel Costas et al.   JOURNAL OF MOLECULAR BIOLOGY

A Generic Mechanism of Emergence of Amyloid Protofilaments from Disordered Oligomeric Aggregates

(2008) Stefan Auer et al.   PLoS Computational Biology

Folding versus aggregation: Polypeptide conformations on competing pathways

(2007) Thomas R. Jahn et al.   ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS

Mechanisms of Protein Fibril Formation: Nucleated Polymerization with Competing Off-Pathway Aggregation

(2007) Evan T. Powers et al.   BIOPHYSICAL JOURNAL

FTIR reveals structural differences between native β-sheet proteins and amyloid fibrils

(2004) Giorgia Zandomeneghi et al.   PROTEIN SCIENCE

A kinetic study of β-lactoglobulin amyloid fibril formation promoted by urea

(2002) Daizo Hamada et al.   PROTEIN SCIENCE