PASTA 2.0: an improved server for protein aggregation prediction

FISH Amyloid – a new method for finding amyloidogenic segments in proteins based on site specific co-occurence of aminoacids

(2014) Pawel Gasior et al.   BMC BIOINFORMATICS

A serendipitous survey of prediction algorithms for amyloidogenicity

(2013) Bartholomew P. Roland et al.   BIOPOLYMERS

BACHSCORE. A tool for evaluating efficiently and reliably the quality of large sets of protein structures

(2013) E. Sarti et al.   COMPUTER PHYSICS COMMUNICATIONS

A Consensus Method for the Prediction of ‘Aggregation-Prone’ Peptides in Globular Proteins

(2013) Antonios C. Tsolis et al.   PLoS One

MetAmyl: A METa-Predictor for AMYLoid Proteins

(2013) Mathieu Emily et al.   PLoS One

MobiDB: a comprehensive database of intrinsic protein disorder annotations

(2012) T. Di Domenico et al.   BIOINFORMATICS

The Amyloid State of Proteins in Human Diseases

(2012) David Eisenberg et al.   CELL

Oligomeric Intermediates in Amyloid Formation: Structure Determination and Mechanisms of Toxicity

(2012) Marcus Fändrich   JOURNAL OF MOLECULAR BIOLOGY

A simple and efficient statistical potential for scoring ensembles of protein structures

(2012) Pilar Cossio et al.   Scientific Reports

A method for probing the mutational landscape of amyloid structure

(2011) Charles W. O'Donnell et al.   BIOINFORMATICS

ESpritz: accurate and fast prediction of protein disorder

(2011) Ian Walsh et al.   BIOINFORMATICS

Amyloid Assemblies: Protein Legos at a Crossroads in Bottom-Up Synthetic Biology

(2010) Rafael Giraldo   CHEMBIOCHEM

Exploring the sequence determinants of amyloid structure using position-specific scoring matrices

(2010) Sebastian Maurer-Stroh et al.   NATURE METHODS

The prion hypothesis: from biological anomaly to basic regulatory mechanism

(2010) Mick F. Tuite et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

FoldAmyloid: a method of prediction of amyloidogenic regions from protein sequence

(2009) S. O. Garbuzynskiy et al.   BIOINFORMATICS

Prediction of amyloid fibril-forming segments based on a support vector machine

(2009) Jian Tian et al.   BMC BIOINFORMATICS

NetCSSP: web application for predicting chameleon sequences and amyloid fibril formation

(2009) C. Kim et al.   NUCLEIC ACIDS RESEARCH

Amyloidogenic determinants are usually not buried

(2009) Kimon K Frousios et al.   BMC STRUCTURAL BIOLOGY

TESE: generating specific protein structure test set ensembles

(2008) F. Sirocco et al.   BIOINFORMATICS

Amyloid formation by globular proteins under native conditions

(2008) Fabrizio Chiti et al.   Nature Chemical Biology