RNA-seq Transcriptome Response of Flax (Linum usitatissimum L.) to the Pathogenic Fungus Fusarium oxysporum f. sp. lini
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Title
RNA-seq Transcriptome Response of Flax (Linum usitatissimum L.) to the Pathogenic Fungus Fusarium oxysporum f. sp. lini
Authors
Keywords
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Journal
Frontiers in Plant Science
Volume 7, Issue -, Pages -
Publisher
Frontiers Media SA
Online
2016-11-24
DOI
10.3389/fpls.2016.01766
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Note: Only part of the references are listed.- Genomes and Transcriptomes of Partners in Plant-Fungal- Interactions between Canola (Brassica napus) and Two Leptosphaeria Species
- (2017) Rohan G. T. Lowe et al. PLoS One
- Evaluation of the significance of cell wall polymers in flax infected with a pathogenic strain of Fusarium oxysporum
- (2016) Wioleta Wojtasik et al. BMC PLANT BIOLOGY
- Transcriptome Profiling of Resistance to Fusarium oxysporum f. sp. conglutinans in Cabbage (Brassica oleracea) Roots
- (2016) Miaomiao Xing et al. PLoS One
- Small RNAs from the wheat stripe rust fungus (Puccinia striiformis f.sp. tritici)
- (2015) Nicholas A. Mueth et al. BMC GENOMICS
- Major latex protein-like protein 43(MLP43) functions as a positive regulator during abscisic acid responses and confers drought tolerance inArabidopsis thaliana
- (2015) Yanping Wang et al. JOURNAL OF EXPERIMENTAL BOTANY
- Hormone crosstalk in wound stress response: wound-inducible amidohydrolases can simultaneously regulate jasmonate and auxin homeostasis inArabidopsis thaliana
- (2015) Tong Zhang et al. JOURNAL OF EXPERIMENTAL BOTANY
- Cotton Major Latex Protein 28 Functions as a Positive Regulator of the Ethylene Responsive Factor 6 in Defense against Verticillium dahliae
- (2015) Chun-Lin Yang et al. Molecular Plant
- Carotenoid Metabolism in Plants
- (2015) Nazia Nisar et al. Molecular Plant
- Changes in gene expression profiles as they relate to the adult plant leaf rust resistance in the wheat cv. Toropi
- (2015) Alice Casassola et al. PHYSIOLOGICAL AND MOLECULAR PLANT PATHOLOGY
- Transcriptome and Metabolite Profiling of the Infection Cycle ofZymoseptoria triticion Wheat Reveals a Biphasic Interaction with Plant Immunity Involving Differential Pathogen Chromosomal Contributions and a Variation on the Hemibiotrophic Lifestyle Definition
- (2015) Jason J. Rudd et al. PLANT PHYSIOLOGY
- Castanea root transcriptome in response to Phytophthora cinnamomi challenge
- (2015) Susana Serrazina et al. Tree Genetics & Genomes
- Altered Gene Expression Profiles of Wheat Genotypes against Fusarium Head Blight
- (2015) Ayumi Kosaka et al. Toxins
- Transcriptome analysis of wheat inoculated with Fusarium graminearum
- (2015) Mustafa Erayman et al. Frontiers in Plant Science
- Polyamine metabolism in flax in response to treatment with pathogenic and non–pathogenic Fusarium strains
- (2015) Wioleta Wojtasik et al. Frontiers in Plant Science
- Somatic embryogenesis receptor-like kinase 5 in the ecotype Landsberg erecta of Arabidopsis is a functional RD LRR-RLK in regulating brassinosteroid signaling and cell death control
- (2015) Wangze Wu et al. Frontiers in Plant Science
- Secondary metabolites in fungus-plant interactions
- (2015) Tünde Pusztahelyi et al. Frontiers in Plant Science
- RNA-Seq derived identification of differential transcription in the chrysanthemum leaf following inoculation with Alternaria tenuissima
- (2014) Huiyun Li et al. BMC GENOMICS
- Identification of glutathione S-transferase genes responding to pathogen infestation in Populus tomentosa
- (2014) Weihua Liao et al. FUNCTIONAL & INTEGRATIVE GENOMICS
- Simultaneous transcriptome analysis ofColletotrichum gloeosporioidesand tomato fruit pathosystem reveals novel fungal pathogenicity and fruit defense strategies
- (2014) Noam Alkan et al. NEW PHYTOLOGIST
- The suppression ofAtPrx52affects fibers but not xylem lignification inArabidopsisby altering the proportion of syringyl units
- (2014) Francisco Fernández-Pérez et al. PHYSIOLOGIA PLANTARUM
- High-Resolution Transcript Profiling of the Atypical Biotrophic Interaction betweenTheobroma cacaoand the Fungal PathogenMoniliophthora perniciosa
- (2014) Paulo José Pereira Lima Teixeira et al. PLANT CELL
- Plant Defense Responses in Medicago truncatula Unveiled by Microarray Analysis
- (2014) Miguel Curto et al. PLANT MOLECULAR BIOLOGY REPORTER
- Plant defense response against Fusarium oxysporum and strategies to develop tolerant genotypes in banana
- (2014) V. Swarupa et al. PLANTA
- miR482 Regulation of NBS-LRR Defense Genes during Fungal Pathogen Infection in Cotton
- (2014) Qian-Hao Zhu et al. PLoS One
- Chitinase-Like (CTL) and Cellulose Synthase (CESA) Gene Expression in Gelatinous-Type Cellulosic Walls of Flax (Linum usitatissimum L.) Bast Fibers
- (2014) Natalia Mokshina et al. PLoS One
- Root defense analysis against Fusarium oxysporum reveals new regulators to confer resistance
- (2014) Yi Chung Chen et al. Scientific Reports
- Plant cell wall dynamics and wall-related susceptibility in plant–pathogen interactions
- (2014) Daniela Bellincampi et al. Frontiers in Plant Science
- The alternative Medicago truncatula defense proteome of ROS—defective transgenic roots during early microbial infection
- (2014) Leonard M. Kiirika et al. Frontiers in Plant Science
- The role of the cell wall in plant immunity
- (2014) Frederikke G. Malinovsky et al. Frontiers in Plant Science
- FusariumPathogenomics
- (2013) Li-Jun Ma et al. Annual Review of Microbiology
- Transcriptome-based discovery of pathways and genes related to resistance against Fusarium head blight in wheat landrace Wangshuibai
- (2013) Jin Xiao et al. BMC GENOMICS
- Analysis of banana transcriptome and global gene expression profiles in banana roots in response to infection by race 1 and tropical race 4 of Fusarium oxysporum f. sp. cubense
- (2013) Chunqiang Li et al. BMC GENOMICS
- The Amidohydrolases IAR3 and ILL6 Contribute to Jasmonoyl-Isoleucine Hormone Turnover and Generate 12-Hydroxyjasmonic Acid Upon Wounding inArabidopsisLeaves
- (2013) Emilie Widemann et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- PlantGSEA: a gene set enrichment analysis toolkit for plant community
- (2013) Xin Yi et al. NUCLEIC ACIDS RESEARCH
- RNAseq-based transcriptome analysis ofLactuca sativainfected by the fungal necrotrophBotrytis cinerea
- (2013) KAAT DE CREMER et al. PLANT CELL AND ENVIRONMENT
- Heterotrimeric G Proteins Serve as a Converging Point in Plant Defense Signaling Activated by Multiple Receptor-Like Kinases
- (2013) J. Liu et al. PLANT PHYSIOLOGY
- Comparative RNA-Seq Analysis of Early-Infected Peach Leaves by the Invasive Phytopathogen Xanthomonas arboricola pv. pruni
- (2013) Didier Socquet-Juglard et al. PLoS One
- High-Throughput RNA Sequencing of Pseudomonas-Infected Arabidopsis Reveals Hidden Transcriptome Complexity and Novel Splice Variants
- (2013) Brian E. Howard et al. PLoS One
- MYB transcription factor genes as regulators for plant responses: an overview
- (2013) Supriya Ambawat et al. PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS
- De Novo characterization of the banana root transcriptome and analysis of gene expression under Fusarium oxysporum f. sp. Cubense tropical race 4 infection
- (2012) Zhuo Wang et al. BMC GENOMICS
- Rapid transcriptome characterization and parsing of sequences in a non-model host-pathogen interaction; pea-Sclerotinia sclerotiorum
- (2012) Xiaofeng Zhuang et al. BMC GENOMICS
- Transcriptome profiling of resistant and susceptible Cavendish banana roots following inoculation with Fusarium oxysporum f. sp. cubense tropical race 4
- (2012) Chun-yu Li et al. BMC GENOMICS
- Characterization of the defense transcriptome responsive to Fusarium oxysporum-infection in Arabidopsis using RNA-seq
- (2012) Qian-Hao Zhu et al. GENE
- Isolation and Characterization of Chitinase from Tomato Infected byFusarium oxysporumf. sp.lycopersici
- (2012) Daniel Oliveira Jordão do Amaral et al. JOURNAL OF PHYTOPATHOLOGY
- Transcriptional Activation and Production of Tryptophan-Derived Secondary Metabolites in Arabidopsis Roots Contributes to the Defense against the Fungal Vascular Pathogen Verticillium longisporum
- (2012) Tim Iven et al. Molecular Plant
- Indole-3-Acetaldoxime-Derived Compounds Restrict Root Colonization in the Beneficial Interaction BetweenArabidopsisRoots and the EndophytePiriformospora indica
- (2012) Pyniarlang L. Nongbri et al. MOLECULAR PLANT-MICROBE INTERACTIONS
- The Amino Acid Permeases AAP3 and AAP6 Are Involved in Root-Knot Nematode Parasitism of Arabidopsis
- (2012) Heather H. Marella et al. MOLECULAR PLANT-MICROBE INTERACTIONS
- Arabidopsis Defense against Botrytis cinerea: Chronology and Regulation Deciphered by High-Resolution Temporal Transcriptomic Analysis
- (2012) O. Windram et al. PLANT CELL
- A MicroRNA Superfamily Regulates Nucleotide Binding Site-Leucine-Rich Repeats and Other mRNAs
- (2012) P. V. Shivaprasad et al. PLANT CELL
- The genome of flax (Linum usitatissimum) assembledde novofrom short shotgun sequence reads
- (2012) Zhiwen Wang et al. PLANT JOURNAL
- The SAUR19 subfamily of SMALL AUXIN UP RNA genes promote cell expansion
- (2012) Angela K. Spartz et al. PLANT JOURNAL
- Molecular characterization of stress resistance-related chitinase genes of Brassica rapa
- (2012) Nasar Uddin Ahmed et al. PLANT PHYSIOLOGY AND BIOCHEMISTRY
- Genes of phenylpropanoid pathway are activated in early response to Fusarium attack in flax plants
- (2012) Kamil Kostyn et al. PLANT SCIENCE
- Verticillium longisporum Infection Affects the Leaf Apoplastic Proteome, Metabolome, and Cell Wall Properties in Arabidopsis thaliana
- (2012) Saskia Floerl et al. PLoS One
- Simultaneous RNA-Seq Analysis of a Mixed Transcriptome of Rice and Blast Fungus Interaction
- (2012) Yoshihiro Kawahara et al. PLoS One
- MicroRNA regulation of plant innate immune receptors
- (2012) F. Li et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Hormonal Modulation of Plant Immunity
- (2011) Corné M.J. Pieterse et al. Annual Review of Cell and Developmental Biology
- A Receptor-like Cytoplasmic Kinase Phosphorylates the Host Target RIN4, Leading to the Activation of a Plant Innate Immune Receptor
- (2011) Jun Liu et al. Cell Host & Microbe
- MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
- (2011) J. Zhai et al. GENES & DEVELOPMENT
- The influence of carotenoid biosynthesis modification on the Fusarium culmorum and Fusarium oxysporum resistance in flax
- (2011) A. Boba et al. PHYSIOLOGICAL AND MOLECULAR PLANT PATHOLOGY
- The changes in pectin metabolism in flax infected with Fusarium
- (2011) Wioleta Wojtasik et al. PLANT PHYSIOLOGY AND BIOCHEMISTRY
- Selection of reference genes for quantitative gene expression normalization in flax (Linum usitatissimum L.)
- (2010) Rudy Huis et al. BMC PLANT BIOLOGY
- agriGO: a GO analysis toolkit for the agricultural community
- (2010) Zhou Du et al. NUCLEIC ACIDS RESEARCH
- Lignin Biosynthesis and Structure
- (2010) R. Vanholme et al. PLANT PHYSIOLOGY
- Arabidopsis Auxin Mutants Are Compromised in Systemic Acquired Resistance and Exhibit Aberrant Accumulation of Various Indolic Compounds
- (2010) W. M. Truman et al. PLANT PHYSIOLOGY
- ABA perception and signalling
- (2010) Agepati S. Raghavendra et al. TRENDS IN PLANT SCIENCE
- TopHat: discovering splice junctions with RNA-Seq
- (2009) Cole Trapnell et al. BIOINFORMATICS
- Identification and expression analysis of WRKY transcription factor genes in canola (Brassica napus L.) in response to fungal pathogens and hormone treatments
- (2009) Bo Yang et al. BMC PLANT BIOLOGY
- Regulation of Cell Death and Innate Immunity by Two Receptor-like Kinases in Arabidopsis
- (2009) Minghui Gao et al. Cell Host & Microbe
- The jasmonate pathway: the ligand, the receptor and the core signalling module
- (2009) Sandra Fonseca et al. CURRENT OPINION IN PLANT BIOLOGY
- Plant Antimicrobial Agents and Their Effects on Plant and Human Pathogens
- (2009) Rocío González-Lamothe et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- Engineering Flax with the GT Family 1 Solanum sogarandinum Glycosyltransferase SsGT1 Confers Increased Resistance to Fusarium Infection
- (2009) Katarzyna Lorenc-Kukuła et al. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY
- Characterization of a pathogenesis-related thaumatin-like protein geneTaPR5from wheat induced by stripe rust fungus
- (2009) Xiaojie Wang et al. PHYSIOLOGIA PLANTARUM
- Plant plasma membrane water channels conduct the signalling molecule H2O2
- (2008) Marek Dynowski et al. BIOCHEMICAL JOURNAL
- Sgt1, but not Rar1, is essential for the RB-mediated broad-spectrum resistance to potato late blight
- (2008) Pudota B Bhaskar et al. BMC PLANT BIOLOGY
- The Arabidopsis GRAS Protein SCL14 Interacts with Class II TGA Transcription Factors and Is Essential for the Activation of Stress-Inducible Promoters
- (2008) B. Fode et al. PLANT CELL
- Variation patterns within 153 flax ( Linum usitatissimum L.) genebank accessions based on evaluation for resistance to fusarium wilt, anthracnose and pasmo
- (2008) Axel Diederichsen et al. Plant Genetic Resources-Characterization and Utilization
- Heterotrimeric G proteins-mediated resistance to necrotrophic pathogens includes mechanisms independent of salicylic acid-, jasmonic acid/ethylene- and abscisic acid-mediated defense signaling
- (2008) Yuri Trusov et al. PLANT JOURNAL
- Regulation of the anthocyanin biosynthetic pathway by the TTG1/bHLH/Myb transcriptional complex in Arabidopsis seedlings
- (2008) Antonio Gonzalez et al. PLANT JOURNAL
- Regulation and Function of Arabidopsis JASMONATE ZIM-Domain Genes in Response to Wounding and Herbivory
- (2008) H. S. Chung et al. PLANT PHYSIOLOGY
- Global Analysis of Arabidopsis Gene Expression Uncovers a Complex Array of Changes Impacting Pathogen Response and Cell Cycle during Geminivirus Infection
- (2008) J. T. Ascencio-Ibanez et al. PLANT PHYSIOLOGY
- Characterization of a new antifungal lipid transfer protein from wheat
- (2008) S. Isaac Kirubakaran et al. PLANT PHYSIOLOGY AND BIOCHEMISTRY
- Structure and function of enzymes involved in the biosynthesis of phenylpropanoids
- (2008) J.-L. Ferrer et al. PLANT PHYSIOLOGY AND BIOCHEMISTRY
- Molecular characterization of cell death induced by a compatible interaction between Fusarium oxysporum f. sp. linii and flax (Linum usitatissimum) cells
- (2008) Christophe Hano et al. PLANT PHYSIOLOGY AND BIOCHEMISTRY
- Plant pathogenesis-related (PR) proteins: A focus on PR peptides
- (2008) Jan Sels et al. PLANT PHYSIOLOGY AND BIOCHEMISTRY
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