RNAseq-based transcriptome analysis ofLactuca sativainfected by the fungal necrotrophBotrytis cinerea

Plant Immunity to Necrotrophs

(2012) Tesfaye Mengiste   Annual Review of Phytopathology

Lipoxygenases: Potential starting biocatalysts for the synthesis of signaling compounds

(2012) Young-Chul Joo et al.   BIOTECHNOLOGY ADVANCES

RNA-Seq reveals complex genetic response to deepwater horizon oil release in Fundulus grandis

(2012) Tzintzuni I Garcia et al.   BMC GENOMICS

Photosynthesis, photorespiration, and light signalling in defence responses

(2012) S. Kangasjarvi et al.   JOURNAL OF EXPERIMENTAL BOTANY

Biochar mediates systemic response of strawberry to foliar fungal pathogens

(2012) Yael Meller Harel et al.   PLANT AND SOIL

Arabidopsis Defense against Botrytis cinerea: Chronology and Regulation Deciphered by High-Resolution Temporal Transcriptomic Analysis

(2012) O. Windram et al.   PLANT CELL

Transcriptome profiling and in silico analysis of somatic embryos in Japanese larch (Larix leptolepis)

(2012) Yuan Zhang et al.   PLANT CELL REPORTS

Arabidopsis WRKY33 Is a Key Transcriptional Regulator of Hormonal and Metabolic Responses toward Botrytis cinerea Infection

(2012) R. P. Birkenbihl et al.   PLANT PHYSIOLOGY

Genetic mapping and characterization of the globe artichoke (+)-germacrene A synthase gene, encoding the first dedicated enzyme for biosynthesis of the bitter sesquiterpene lactone cynaropicrin

(2012) Barbara Menin et al.   PLANT SCIENCE

The Transcriptome of Compatible and Incompatible Interactions of Potato (Solanum tuberosum) with Phytophthora infestans Revealed by DeepSAGE Analysis

(2012) Gabor Gyetvai et al.   PLoS One

Proteomic analysis of the compatible interaction between Vitis vinifera and Plasmopara viticola

(2011) Alberto Milli et al.   Journal of Proteomics

Differential Growth-Related Gene Expression in Abalone (Haliotis midae)

(2011) Mathilde van der Merwe et al.   MARINE BIOTECHNOLOGY

Spatial and temporal transcriptomic analysis of the Arabidopsis thaliana–Botrytis cinerea interaction

(2011) Joseph M. K. Mulema et al.   MOLECULAR BIOLOGY REPORTS

The Sesquiterpene Botrydial Produced by Botrytis cinerea Induces the Hypersensitive Response on Plant Tissues and Its Action Is Modulated by Salicylic Acid and Jasmonic Acid Signaling

(2011) Franco Rubén Rossi et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Timing of plant immune responses by a central circadian regulator

(2011) Wei Wang et al.   NATURE

SSH reveals a linkage between a senescence-associated protease and Verticillium wilt symptom development in lettuce (Lactuca sativa)

(2011) Steven J. Klosterman et al.   PHYSIOLOGICAL AND MOLECULAR PLANT PATHOLOGY

Botrytis cinereaManipulates the Antagonistic Effects between Immune Pathways to Promote Disease Development in Tomato

(2011) Mohamed El Oirdi et al.   PLANT CELL

Post-Translational Derepression of Invertase Activity in Source Leaves via Down-Regulation of Invertase Inhibitor Expression Is Part of the Plant Defense Response

(2010) Katharina B. Bonfig et al.   Molecular Plant

Biotic stress globally downregulates photosynthesis genes

(2010) DAMLA D. BILGIN et al.   PLANT CELL AND ENVIRONMENT

A domain swap approach reveals a role of the plant wall-associated kinase 1 (WAK1) as a receptor of oligogalacturonides

(2010) A. Brutus et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Gene ontology analysis for RNA-seq: accounting for selection bias

(2010) Matthew D Young et al.   GENOME BIOLOGY

Fight to the death: Arabidopsis thaliana defense response to fungal necrotrophic pathogens

(2009) Joanna Łaźniewska et al.   ACTA PHYSIOLOGIAE PLANTARUM

A Renaissance of Elicitors: Perception of Microbe-Associated Molecular Patterns and Danger Signals by Pattern-Recognition Receptors

(2009) Thomas Boller et al.   Annual Review of Plant Biology

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Identification, functional characterization and developmental regulation of sesquiterpene synthases from sunflower capitate glandular trichomes

(2009) Jens C Göpfert et al.   BMC PLANT BIOLOGY

Diversity, regulation, and genetic manipulation of plant mono- and sesquiterpenoid biosynthesis

(2009) Fengnian Yu et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

Persistent, symptomless, systemic, and seed-borne infection of lettuce by Botrytis cinerea

(2009) Elias N. K. Sowley et al.   EUROPEAN JOURNAL OF PLANT PATHOLOGY

Receptor-mediated signalling in plants: molecular patterns and programmes

(2009) M. Tor et al.   JOURNAL OF EXPERIMENTAL BOTANY

Diverse Transcriptional Programs Associated with Environmental Stress and Hormones in the Arabidopsis Receptor-Like Kinase Gene Family

(2009) Lee Chae et al.   Molecular Plant

Primary Metabolism and Plant Defense—Fuel for the Fire

(2009) Melvin D. Bolton   MOLECULAR PLANT-MICROBE INTERACTIONS

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

(2009) Da Wei Huang et al.   Nature Protocols

ROS in biotic interactions

(2009) Miguel Angel Torres   PHYSIOLOGIA PLANTARUM

Crosstalk between biotic and abiotic stress responses in tomato is mediated by theAIM1transcription factor

(2009) Synan AbuQamar et al.   PLANT JOURNAL

Transcript profiling of oilseed rape (Brassica napus) primed for biocontrol differentiate genes involved in microbial interactions with beneficial Bacillus amyloliquefaciens from pathogenic Botrytis cinerea

(2009) Bejai R. Sarosh et al.   PLANT MOLECULAR BIOLOGY

Ripening-Regulated Susceptibility of Tomato Fruit to Botrytis cinerea Requires NOR But Not RIN or Ethylene

(2009) D. Cantu et al.   PLANT PHYSIOLOGY

Evolutionary History and Stress Regulation of Plant Receptor-Like Kinase/Pelle Genes

(2009) M. D. Lehti-Shiu et al.   PLANT PHYSIOLOGY

Hormone (Dis)harmony Moulds Plant Health and Disease

(2009) M. R. Grant et al.   SCIENCE

Fungal pathogens in Norwegian lettuce fields

(2008) Berit Nordskog et al.   ACTA AGRICULTURAE SCANDINAVICA SECTION B-SOIL AND PLANT SCIENCE

Diversity of defence mechanisms in plant–oomycete interactions: a case study of Lactuca spp. and Bremia lactucae

(2008) Aleš Lebeda et al.   EUROPEAN JOURNAL OF PLANT PATHOLOGY

Characterisation of fungal pathogens causing basal rot of lettuce in Belgian greenhouses

(2008) Sarah Van Beneden et al.   EUROPEAN JOURNAL OF PLANT PATHOLOGY

Metabolomics- and Proteomics-Assisted Genome Annotation and Analysis of the Draft Metabolic Network of Chlamydomonas reinhardtii

(2008) P. May et al.   GENETICS

Effects of Crop Development on the Emission of Volatiles in Leaves ofLycopersicon esculentumand Its Inhibitory Activity toBotrytis cinereaandFusarium oxysporum

(2008) Peng-Ying Zhang et al.   Journal of Integrative Plant Biology

Repression of the Auxin Response Pathway Increases Arabidopsis Susceptibility to Necrotrophic Fungi

(2008) Francisco Llorente et al.   Molecular Plant

Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists

(2008) Da Wei Huang et al.   NUCLEIC ACIDS RESEARCH

Reprogramming a maize plant: transcriptional and metabolic changes induced by the fungal biotroph Ustilago maydis

(2008) Gunther Doehlemann et al.   PLANT JOURNAL

Mapping Metabolic and Transcript Temporal Switches during Germination in Rice Highlights Specific Transcription Factors and the Role of RNA Instability in the Germination Process

(2008) K. A. Howell et al.   PLANT PHYSIOLOGY

Genetic Variation for Lettuce Seed Thermoinhibition Is Associated with Temperature-Sensitive Expression of Abscisic Acid, Gibberellin, and Ethylene Biosynthesis, Metabolism, and Response Genes

(2008) J. Argyris et al.   PLANT PHYSIOLOGY