Diverse Functions of Small RNAs in Different Plant–Pathogen Communications
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Title
Diverse Functions of Small RNAs in Different Plant–Pathogen Communications
Authors
Keywords
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Journal
Frontiers in Microbiology
Volume 7, Issue -, Pages -
Publisher
Frontiers Media SA
Online
2016-10-04
DOI
10.3389/fmicb.2016.01552
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Note: Only part of the references are listed.- Phytophthora infestans Argonaute 1 binds microRNA and small RNAs from effector genes and transposable elements
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- (2015) Liu Yang et al. Journal of Integrative Plant Biology
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- (2015) Daniel Holoch et al. NATURE REVIEWS GENETICS
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- (2015) Bingbin Shi et al. NEW PHYTOLOGIST
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- (2015) Charith Raj Adkar-Purushothama et al. PLANT CELL
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- (2015) Lei Chen et al. PLANT CELL REPORTS
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- (2015) Qili Fei et al. PLANT JOURNAL
- Alterations in host DNA methylation in response to constitutive expression ofHop stunt viroidRNA inNicotiana benthamianaplants
- (2015) M. Castellano et al. PLANT PATHOLOGY
- Phytophthoraeffector targets a novel component of small RNA pathway in plants to promote infection
- (2015) Yongli Qiao et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- MicroRNA-mediated regulation of gene expression in the response of rice plants to fungal elicitors
- (2015) Patricia Baldrich et al. RNA Biology
- viral silencing suppressors: Tools forged to fine-tune host-pathogen coexistence
- (2015) Tibor Csorba et al. VIROLOGY
- OsRDR6 plays role in host defense against double-stranded RNA virus, Rice Dwarf Phytoreovirus
- (2015) Wei Hong et al. Scientific Reports
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- Analysis of Geminivirus AL2 and L2 Proteins Reveals a Novel AL2 Silencing Suppressor Activity
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- Small RNAs: A New Paradigm in Plant-Microbe Interactions
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- Specific Argonautes Selectively Bind Small RNAs Derived from Potato Spindle Tuber Viroid and Attenuate Viroid Accumulation In Vivo
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- (2014) Zihao Xia et al. PLoS One
- Tomato yellow leaf curl virus resistance by Ty-1 involves increased cytosine methylation of viral genomes and is compromised by cucumber mosaic virus infection
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- In Nicotiana species, an artificial microRNA corresponding to the virulence modulating region of Potato spindle tuber viroid directs RNA silencing of a soluble inorganic pyrophosphatase gene and the development of abnormal phenotypes
- (2014) Andrew L. Eamens et al. VIROLOGY
- Geminivirus AL2 protein induces expression of, and interacts with, a calmodulin-like gene, an endogenous regulator of gene silencing
- (2014) Ho Yong Chung et al. VIROLOGY
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- (2013) Vidhyavathi Raman et al. BMC GENOMICS
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- (2013) B. Wang et al. JOURNAL OF GENERAL VIROLOGY
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- (2013) P. Raja et al. JOURNAL OF VIROLOGY
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- (2012) Feng Feng et al. CURRENT OPINION IN PLANT BIOLOGY
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- (2012) Deborah L. McEwan et al. MOLECULAR CELL
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- (2012) Elena Dadami et al. Molecular Plant
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- (2012) Hongwu Bian et al. NEW PHYTOLOGIST
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- OsTIR1 and OsAFB2 Downregulation via OsmiR393 Overexpression Leads to More Tillers, Early Flowering and Less Tolerance to Salt and Drought in Rice
- (2012) Kuaifei Xia et al. PLoS One
- Identification of a Plant Viral RNA Genome in the Nucleus
- (2012) Ruimin Gao et al. PLoS One
- Evidence for Small RNAs Homologous to Effector-Encoding Genes and Transposable Elements in the Oomycete Phytophthora infestans
- (2012) Ramesh R. Vetukuri et al. PLoS One
- MicroRNA regulation of plant innate immune receptors
- (2012) F. Li et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Viroid-specific small RNA in plant disease
- (2012) Christian Hammann et al. RNA Biology
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- (2012) Xiaoming Zhang et al. GENOME BIOLOGY
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- (2011) Cristiano C Nunes et al. BMC GENOMICS
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- (2011) J. Zhai et al. GENES & DEVELOPMENT
- Microarray profiling reveals microRNAs involving soybean resistance to Phytophthora sojae
- (2011) Na Guo et al. GENOME
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- (2011) H. Zhu et al. JOURNAL OF VIROLOGY
- MicroRNA regulated defense responses in Triticum aestivum L. during Puccinia graminis f.sp. tritici infection
- (2011) Om Prakash Gupta et al. MOLECULAR BIOLOGY REPORTS
- Arabidopsis Argonaute 2 Regulates Innate Immunity via miRNA393∗-Mediated Silencing of a Golgi-Localized SNARE Gene, MEMB12
- (2011) Xiaoming Zhang et al. MOLECULAR CELL
- Evidence for involvement of Dicer-like, Argonaute and histone deacetylase proteins in gene silencing in Phytophthora infestans
- (2011) RAMESH R. VETUKURI et al. MOLECULAR PLANT PATHOLOGY
- Satellite RNA reduces expression of the 2b suppressor protein resulting in the attenuation of symptoms caused by Cucumber mosaic virus infection
- (2011) WEI-NA HOU et al. MOLECULAR PLANT PATHOLOGY
- Genome-wide transcriptome analysis of the plant pathogen Xanthomonas identifies sRNAs with putative virulence functions
- (2011) Cornelius Schmidtke et al. NUCLEIC ACIDS RESEARCH
- Massive production of small RNAs from a non-coding region of Cauliflower mosaic virus in plant defense and viral counter-defense
- (2011) Todd Blevins et al. NUCLEIC ACIDS RESEARCH
- Function and Evolution of a MicroRNA That Regulates a Ca2+-ATPase and Triggers the Formation of Phased Small Interfering RNAs in Tomato Reproductive Growth
- (2011) Ying Wang et al. PLANT CELL
- BSCTV C2 Attenuates the Degradation of SAMDC1 to Suppress DNA Methylation-Mediated Gene Silencing inArabidopsis
- (2011) Zhonghui Zhang et al. PLANT CELL
- The 21-Nucleotide, but Not 22-Nucleotide, Viral Secondary Small Interfering RNAs Direct Potent Antiviral Defense by Two Cooperative Argonautes inArabidopsis thaliana
- (2011) Xian-Bing Wang et al. PLANT CELL
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- (2011) M. Jaubert et al. PLANT PHYSIOLOGY
- Characterization of Small Interfering RNAs Derived from the Geminivirus/Betasatellite Complex Using Deep Sequencing
- (2011) Xiuling Yang et al. PLoS One
- An Antiviral Defense Role of AGO2 in Plants
- (2011) Jagger J. W. Harvey et al. PLoS One
- Extensive, clustered parental imprinting of protein-coding and noncoding RNAs in developing maize endosperm
- (2011) M. Zhang et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- SID-1 is a dsRNA-selective dsRNA-gated channel
- (2011) J. D. Shih et al. RNA
- Accumulation of Potato spindle tuber viroid-specific small RNAs is accompanied by specific changes in gene expression in two tomato cultivars
- (2011) Ying Wang et al. VIROLOGY
- RNA-dependent RNA polymerase 6 of rice (Oryza sativa) plays role in host defense against negative-strand RNA virus, Rice stripe virus
- (2011) Lin Jiang et al. VIRUS RESEARCH
- Viral Small Interfering RNAs Target Host Genes to Mediate Disease Symptoms in Plants
- (2011) Neil A. Smith et al. PLoS Pathogens
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- (2011) Xiuling Yang et al. PLoS Pathogens
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- (2011) Hanako Shimura et al. PLoS Pathogens
- Biochemical Principles of Small RNA Pathways
- (2010) Qinghua Liu et al. Annual Review of Biochemistry
- Role of Small RNAs in Host-Microbe Interactions
- (2010) Surekha Katiyar-Agarwal et al. Annual Review of Phytopathology
- Characterization of siRNAs derived from rice stripe virus in infected rice plants by deep sequencing
- (2010) Fei Yan et al. ARCHIVES OF VIROLOGY
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- (2010) Mingming Xin et al. BMC PLANT BIOLOGY
- The role of Hfq in bacterial pathogens
- (2010) Yanjie Chao et al. CURRENT OPINION IN MICROBIOLOGY
- Post-transcriptional gene silencing of root-knot nematode in transformed soybean roots
- (2010) Heba M.M. Ibrahim et al. EXPERIMENTAL PARASITOLOGY
- Multiple Functions of Rice Dwarf Phytoreovirus Pns10 in Suppressing Systemic RNA Silencing
- (2010) B. Ren et al. JOURNAL OF VIROLOGY
- Diverse Pathways Generate MicroRNA-like RNAs and Dicer-Independent Small Interfering RNAs in Fungi
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- (2010) Xiao-Bao Ying et al. PLANT CELL
- HIGS: Host-Induced Gene Silencing in the Obligate Biotrophic Fungal PathogenBlumeria graminis
- (2010) Daniela Nowara et al. PLANT CELL
- Arabidopsis RNA-Dependent RNA Polymerases and Dicer-Like Proteins in Antiviral Defense and Small Interfering RNA Biogenesis during Turnip Mosaic Virus Infection
- (2010) H. Garcia-Ruiz et al. PLANT CELL
- Bacteria-responsive microRNAs regulate plant innate immunity by modulating plant hormone networks
- (2010) Weixiong Zhang et al. PLANT MOLECULAR BIOLOGY
- Identification of MicroRNAs Involved in Pathogen-Associated Molecular Pattern-Triggered Plant Innate Immunity
- (2010) Y. Li et al. PLANT PHYSIOLOGY
- Small RNAs and Their Roles in Plant Development
- (2009) Xuemei Chen Annual Review of Cell and Developmental Biology
- The Biology of Viroid-Host Interactions
- (2009) Biao Ding Annual Review of Phytopathology
- RNA-Dependent RNA Polymerase 6 Delays Accumulation and Precludes Meristem Invasion of a Viroid That Replicates in the Nucleus
- (2009) F. Di Serio et al. JOURNAL OF VIROLOGY
- RNAi-mediated resistance toPotato spindle tuber viroidin transgenic tomato expressing a viroid hairpin RNA construct
- (2009) NORA SCHWIND et al. MOLECULAR PLANT PATHOLOGY
- Small silencing RNAs: an expanding universe
- (2009) Megha Ghildiyal et al. NATURE REVIEWS GENETICS
- Small RNA Deep Sequencing Reveals Role for Arabidopsis thaliana RNA-Dependent RNA Polymerases in Viral siRNA Biogenesis
- (2009) Xiaopeng Qi et al. PLoS One
- RNAi-mediated viral immunity requires amplification of virus-derived siRNAs in Arabidopsis thaliana
- (2009) X.-B. Wang et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Deep-sequencing of plant viral small RNAs reveals effective and widespread targeting of viral genomes
- (2009) Livia Donaire et al. VIROLOGY
- Characterization of conserved and novel microRNAs and their targets, including a TuMV-induced TIR-NBS-LRR classRgene-derived novel miRNA in Brassica
- (2008) Xiang-Feng He et al. FEBS LETTERS
- Viral Genome Methylation as an Epigenetic Defense against Geminiviruses
- (2008) P. Raja et al. JOURNAL OF VIROLOGY
- RNA Silencing against Geminivirus: Complementary Action of Posttranscriptional Gene Silencing and Transcriptional Gene Silencing in Host Recovery
- (2008) E. A. Rodriguez-Negrete et al. JOURNAL OF VIROLOGY
- The Mechanism Selecting the Guide Strand from Small RNA Duplexes is Different Among Argonaute Proteins
- (2008) Atsushi Takeda et al. PLANT AND CELL PHYSIOLOGY
- Viroid-Induced Symptoms in Nicotiana benthamiana Plants Are Dependent on RDR6 Activity
- (2008) G. Gomez et al. PLANT PHYSIOLOGY
- Arabidopsis DRB4, AGO1, AGO7, and RDR6 participate in a DCL4-initiated antiviral RNA silencing pathway negatively regulated by DCL1
- (2008) F. Qu et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Suppression of the MicroRNA Pathway by Bacterial Effector Proteins
- (2008) L. Navarro et al. SCIENCE
- Importance of coat protein and RNA silencing in satellite RNA/virus interactions
- (2008) Alicia J. Manfre et al. VIROLOGY
- Characterization of the siRNAs associated with peach latent mosaic viroid infection
- (2008) Patrick St-Pierre et al. VIROLOGY
- Small RNAs in tomato fruit and leaf development
- (2007) A ITAYA et al. Biochimica et Biophysica Acta-Gene Regulatory Mechanisms
- Double-stranded RNA interferes in a sequence-specific manner with the infection of representative members of the two viroid families
- (2007) Alberto Carbonell et al. VIROLOGY
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